>SSK189 (SSK189Q) /CSM/SS/SSK1-D/SSK189Q.Seq.d/
XXXXXXXXXXGATGTAGAGGATATGTTAAGAAAATTTGATTCAAATGGTGATGGTAATAT
TACATTTGATGAAGCTGTAAAACGTTTGAAGGAAACCGGTTCAAAAGATCCATTACGTGC
TGCCTCTTCAATGTTTATTTCTCTTGATAAGGATAAGGATGGAATTATTTCAATAAAAGA
GATTCATGGCCATAAGGCTGATGTTGCTGCAAAGAAATTGCAAAAGGCAATTAACAACAT
CTGTAACAACTTCTTGAAAGGCTATGACACTGATAAGGATGGAAGGATCTCATGGGATGA
AGTATGCAATTGGGTAAATAAAAACAATCCAGATGCAATTGCTCCACTTATGATTGTTGA
AAATTTCTTTAGTGAATTGGATAAAGATAATGACAGATTCGTAACCAAGTGTGAACTTCA
GGAGTACGTTACTAAATACAAAAGTCTCCCAGAACAATAAATAATTTATTGTTCAAATTC
AATAATTATTAATCAACATTTATAATTTTCATTTTTAAAAAAATTTAAATAAATAAATAA
ATAAAAAATAATCTTTTAAAAATAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

---VEDMLRKFDSNGDGNITFDEAVKRLKETGSKDPLRAASSMFISLDKDKDGIISIKEI
HGHKADVAAKKLQKAINNICNNFLKGYDTDKDGRISWDEVCNWVNKNNPDAIAPLMIVEN
FFSELDKDNDRFVTKCELQEYVTKYKSLPEQ*iiycsnsiiinqhl*fsflkkfk*ink*
kiif*k*kkkkkkkkk

Frame A:
---m*ric*enliqmvmvilhlmkl*nv*rkpvqkihyvlplqclfllirirmelfq*kr
fmairlmllqrnckrqlttsvtts*kamtlirmegshgmkyaig*iktiqmqllhl*llk
islvnwikimtds*psvnfrstllntkvsqnnk*fivqiq*lliniynfhf*knlnk*in
kk*sfknkkkkkkkkk


Frame B:
---crgyvkki*fkw*w*yyi**scktfegnrfkrsitcclfnvyfs**g*gwnyfnkrd
swp*g*ccckeiakgn*qhl*qllerl*h**gwkdlmg*smqlgk*kqsrcncstydc*k
fl**ig*r**qirnqv*tsgvry*iqksprtinnllfkfnny*stfiififkki*ink*i
knnllkikkkkkkkkk


Frame C:
---VEDMLRKFDSNGDGNITFDEAVKRLKETGSKDPLRAASSMFISLDKDKDGIISIKEI
HGHKADVAAKKLQKAINNICNNFLKGYDTDKDGRISWDEVCNWVNKNNPDAIAPLMIVEN
FFSELDKDNDRFVTKCELQEYVTKYKSLPEQ*iiycsnsiiinqhl*fsflkkfk*ink*
kiif*k*kkkkkkkkk

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SSM673 (SSM673Q) /CSM/SS/SSM6-D/SSM673Q.Seq.d/                        932   0.0
SSM417 (SSM417Q) /CSM/SS/SSM4-A/SSM417Q.Seq.d/                        932   0.0
SSM408 (SSM408Q) /CSM/SS/SSM4-A/SSM408Q.Seq.d/                        932   0.0
SSM376 (SSM376Q) /CSM/SS/SSM3-D/SSM376Q.Seq.d/                        932   0.0
SSM294 (SSM294Q) /CSM/SS/SSM2-D/SSM294Q.Seq.d/                        932   0.0
SSL192 (SSL192Q) /CSM/SS/SSL1-D/SSL192Q.Seq.d/                        932   0.0
SSL187 (SSL187Q) /CSM/SS/SSL1-D/SSL187Q.Seq.d/                        932   0.0
SSK850 (SSK850Q) /CSM/SS/SSK8-C/SSK850Q.Seq.d/                        932   0.0
SSK751 (SSK751Q) /CSM/SS/SSK7-C/SSK751Q.Seq.d/                        932   0.0
SSK729 (SSK729Q) /CSM/SS/SSK7-B/SSK729Q.Seq.d/                        932   0.0

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

X82784|X82784.1 D.discoideum mRNA for calcium binding protein.    932   0.0    1
AC116987|AC116987.2 Dictyostelium discoideum chromosome 2 map 3527441-3568052 strain AX4, complete sequence.   920   0.0    1
AE014831|AE014831.1 Plasmodium falciparum 3D7 chromosome 10 section 3 of 7 of the complete sequence.    36   0.010  11
AE014847|AE014847.1 Plasmodium falciparum 3D7 chromosome 12, section 4 of 9 of the complete sequence.    36   0.020  9
AC004709|AC004709.3 Plasmodium falciparum chromosome 12, WORKING DRAFT SEQUENCE, 3 unordered pieces.    36   0.048  7
BQ875038|BQ875038.1 QGI6P19.yg.ab1 QG_ABCDI lettuce salinas Lactuca sativa cDNA clone QGI6P19, mRNA sequence.    42   0.064  2
AQ206386|AQ206386.1 HS_3240_A1_G03_T7 CIT Approved Human Genomic Sperm Library D Homo sapiens genomic clone Plate=3240 Col=5 Row=M, genomic survey sequence.    42   0.18   2
AL445565|AL445565.1 Mycoplasma pulmonis (strain UAB CTIP) complete genome; segment 3/3.    34   0.21   9
AC147952|AC147952.1 Papio anubis clone RP41-96M13, WORKING DRAFT SEQUENCE, 4 unordered pieces.    38   0.55   6
AC114604|AC114604.5 Mus musculus chromosome 9 clone RP23-367L9 map 9, *** SEQUENCING IN PROGRESS ***, 5 ordered pieces.    46   0.56   1

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

(P54653) RecName: Full=Calcium-binding protein 2;  &S62881(S6288...    77   3e-13
(Q869S9) RecName: Full=Calcium-binding protein E; AltName: Full=...    69   1e-10
AB070447_1(AB070447|pid:none) Dictyostelium discoideum cbpE mRNA...    69   1e-10
(Q966Q9) RecName: Full=Calcium-binding protein H; AltName: Full=...    66   6e-10
AJ297597_1(AJ297597|pid:none) Dictyostelium discoideum mRNA for ...    65   1e-09
(Q54RF4) RecName: Full=Calcium-binding protein 4a;                     65   1e-09
(P09485) RecName: Full=Calcium-binding protein LPS1-alpha;             57   4e-07
CR940353_624(CR940353|pid:none) Theileria annulata strain Ankara...    55   1e-06
EF523472_1(EF523472|pid:none) Synthetic construct putative aller...    55   1e-06
FN357341_31(FN357341|pid:none) Schistosoma mansoni genome sequen...    55   1e-06

 psg: 0.75  gvh: 0.27  alm: 0.47  top: 0.53  tms: 0.00  mit: 0.21  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 52.0 %: nuclear
	 24.0 %: cytoplasmic
	 12.0 %: cytoskeletal
	  4.0 %: mitochondrial
	  4.0 %: vacuolar
	  4.0 %: vesicles of secretory system

>> prediction for SSK189 is nuc

>SSK189Z.Seq
----------GATGTAGAGGATATGTTAAGAAAATTTGATTCAAATGGTGATGGTAATAT
TACATTTGATGAAGCTGTAAAACGTTTGAAGGAAACCGGTTCAAAAGATCCATTACGTGC
TGCCTCTTCAATGTTTATTTCTCTTGATAAGGATAAGGATGGAATTATTTCAATAAAAGA
GATTCATGGCCATAAGGCTGATGTTGCTGCAAAGAAATTGCAAAAGGCAATTAACAACAT
CTGTAACAACTTCTTGAAAGGCTATGACACTGATAAGGATGGAAGGATCTCATGGGATGA
AGTATGCAATTGGGTAAATAAAAACAATCCAGATGCAATTGCTCCACTTATGATTGTTGA
AAATTTCTTTAGTGAATTGGATAAAGATAATGACAGATTCGTAACCAAGTGTGAACTTCA
GGAGTACGTTACTAAATACAAAAGTCTCCCAGAACAATAAATAATTTATTGTTCAAATTC
AATAATTATTAATCAACATTTATAATTTTCATTTTTAAAAAAATTTAAATAAATAAATAA
ATAAAAAATAATCTTTTAAAAATAAAAAAAAAAAAAAAAAAAAAAAAAAAAA