>SSJ723 (SSJ723Q) /CSM/SS/SSJ7-A/SSJ723Q.Seq.d/
TTTTTGTACAAAGTAGTAAAAATTTACATATTTTTAAAATTACAATGAGCACTTGTGGTG
ATAATAGTAAAATTTTTCAAGATATTCAAAATTTTATCCAAGATTATGACTTAAATAAGG
ATTACAGTGTAACTTCATCTGAAATATATCAATCATTTTTAAAAAAAATGAATGGTGATA
GTTTAAAGGCATCACAGGCAGCTGGTGTTTTATGTTCAACAGTTGATATGGACAATGATG
GTAAATTCAGTTATTATGAAATTTCTAAATATTGTGCAGACCAGGCAAAAAAACAAATTG
AACAAAATGCTGAGACTGCTGCATTGGCTGATGTCGAAGCATTGTTATTAAGACTTGATA
AAGATAAGGATAAAAAATTAAACAAAACAGAATTTGTTAAATTCTTTAAAGAACAGGGCT
ATAATCCATACTCTGACCCTGATTATGTTCTTAAAATTATTGATTTGGATAAAGATGGAT
ATGTTTCCGCAAGTGAATTACAAGAATGGTTCAAACATAAAAGATTGGCTTATGCAAGAG
GTCCAATTTGTTAAATTCTCTTGGGACAAAATACCACATTAATCTTATTTTTTAAGGTTT
TTAAATTTGGTACAAAAAAAATAAAAATTAAATAAATATTCAATTTCCATTGTCCAAAAT
CCAXXXXXXXXXX

FVQSSKNLHIFKITMSTCGDNSKIFQDIQNFIQDYDLNKDYSVTSSEIYQSFLKKMNGDS
LKASQAAGVLCSTVDMDNDGKFSYYEISKYCADQAKKQIEQNAETAALADVEALLLRLDK
DKDKKLNKTEFVKFFKEQGYNPYSDPDYVLKIIDLDKDGYVSASELQEWFKHKRLAYARG
PIC*illgqnttlilffkvfkfgtkkikik*ifnfhcpks---

Frame A:
flykvvkiyiflklq*alvviivkffkifkilskimt*iritv*lhlkyinhf*kk*mvi
v*rhhrqlvfyvqqliwtmmvnsvimkflnivqtrqknklnkmlrllhwlmskhcy*dli
kirikn*tkqnllnslknraiihtltlimflklliwikmdmfpqvnykngsnikdwlmqe
vqfvkfswdkiph*syflrflnlvqkk*klnkysisivqn---


Frame B:
fctk**kftyf*nynehlw****nfsryskfyprl*lk*glqcnfi*nisiifkknew**
fkgitgswcfmfns*ygq*w*iqll*nf*ilcrpgkktn*tkc*dccig*crsivikt**
r*g*kikqnric*il*rtgl*sil*p*lcs*ny*fg*rwicfrk*itrmvqt*kiglckr
snllnslgtkyhinlif*gf*iwykknkn*iniqfplski---


Frame C:
FVQSSKNLHIFKITMSTCGDNSKIFQDIQNFIQDYDLNKDYSVTSSEIYQSFLKKMNGDS
LKASQAAGVLCSTVDMDNDGKFSYYEISKYCADQAKKQIEQNAETAALADVEALLLRLDK
DKDKKLNKTEFVKFFKEQGYNPYSDPDYVLKIIDLDKDGYVSASELQEWFKHKRLAYARG
PIC*illgqnttlilffkvfkfgtkkikik*ifnfhcpks---

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SSJ723 (SSJ723Q) /CSM/SS/SSJ7-A/SSJ723Q.Seq.d/                       1126   0.0
SSI258 (SSI258Q) /CSM/SS/SSI2-C/SSI258Q.Seq.d/                       1080   0.0
SSC684 (SSC684Q) /CSM/SS/SSC6-D/SSC684Q.Seq.d/                       1080   0.0
SSK215 (SSK215Q) /CSM/SS/SSK2-A/SSK215Q.Seq.d/                       1068   0.0
SSM254 (SSM254Q) /CSM/SS/SSM2-C/SSM254Q.Seq.d/                       1017   0.0
SSF489 (SSF489Q) /CSM/SS/SSF4-D/SSF489Q.Seq.d/                       1013   0.0
SSM536 (SSM536Q) /CSM/SS/SSM5-B/SSM536Q.Seq.d/                        995   0.0
SSF123 (SSF123Q) /CSM/SS/SSF1-A/SSF123Q.Seq.d/                        987   0.0
SSH174 (SSH174Q) /CSM/SS/SSH1-D/SSH174Q.Seq.d/                        969   0.0
SSD832 (SSD832Q) /CSM/SS/SSD8-B/SSD832Q.Seq.d/                        961   0.0

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

AB070449|AB070449.1 Dictyostelium discoideum cbpG mRNA for calcium binding protein CBP7, complete cds, clone:SSM207.   626   0.0    4
AB070448|AB070448.1 Dictyostelium discoideum cbpF mRNA for calcium binding protein CBP6, complete cds, clone:SSA631.   250   e-159  5
AF076972|AF076972.1 Dictyostelium discoideum calcium-binding protein mRNA, complete cds.   155   e-116  7
AL844509|AL844509.1 Plasmodium falciparum chromosome 13.           36   7e-06  23
AL929352|AL929352.1 Plasmodium falciparum strain 3D7, chromosome 5, segment 2/4.    34   2e-05  15
AF303741|AF303741.1 Chilo iridescent virus complete genome.        38   3e-05  12
AX344565|AX344565.1 Sequence 16 from Patent WO0200932.             32   6e-05  15
AR409405|AR409405.1 Sequence 1 from patent US 6632935.             36   1e-04  16
BD061520|BD061520.1 Genome DNA of symbiotic bacteria of aphid.     36   1e-04  16
AL844506|AL844506.1 Plasmodium falciparum chromosome  7.           34   1e-04  22

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

(Q54QT9) RecName: Full=Calcium-binding protein F; AltName: Full=...   226   4e-58
(Q54QU0) RecName: Full=Calcium-binding protein F-like; AltName: ...   219   7e-56
(Q54QT7) RecName: Full=Calcium-binding protein C; AltName: Full=...   201   1e-50
(Q966Q9) RecName: Full=Calcium-binding protein H; AltName: Full=...    52   2e-05
(P54653) RecName: Full=Calcium-binding protein 2;  &S62881(S6288...    41   0.037
(Q2TBI5) RecName: Full=Calcineurin subunit B type 2; AltName: Fu...    40   0.048
AY336971_1(AY336971|pid:none) Xenopus laevis protein phospatase ...    39   0.14
AB375794_1(AB375794|pid:none) Bos taurus mRNA for calcineurin B,...    39   0.18
JC1220(JC1220) calcineurin regulatory chain, brain - mouse  &S43...    39   0.18
D14425_1(D14425|pid:none) Rattus sp. mRNA for calcineurin B, com...    39   0.18

 psg: 0.73  gvh: 0.28  alm: 0.48  top: 0.53  tms: 0.00  mit: 0.33  mip: 0.00
 nuc: 0.02  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 40.0 %: cytoplasmic
	 32.0 %: nuclear
	 12.0 %: mitochondrial
	  8.0 %: cytoskeletal
	  4.0 %: plasma membrane
	  4.0 %: peroxisomal

>> prediction for SSJ723 is cyt

>SSJ723F.Seq
TTTTTGTACAAAGTAGTAAAAATTTACATATTTTTAAAATTACAATGAGCACTTGTGGTG
ATAATAGTAAAATTTTTCAAGATATTCAAAATTTTATCCAAGATTATGACTTAAATAAGG
ATTACAGTGTAACTTCATCTGAAATATATCAATCATTTTTAAAAAAAATGAATGGTGATA
GTTTAAAGGCATCACAGGCAGCTGGTGTTTTATGTTCAACAGTTGATATGGACAATGATG
GTAAATTCAGTTATTATGAAATTTCTAAATATTGTGCAGACCAGGCAAAAAAACAAATTG
AACAAAATGCTGAGACTGCTGCATTGGCTGATGTCGAAGCATTGTTATTAAGACTTGATA
AAGATAAGGATAAAAAATTAAACAAAACAGAATTTGTTAAATTCTTTAAAGAACAGGGCT
ATAATCCATACTCTGACCCTGATTATGTTCTTAAAATTATTGATTTGGATAAAGATGGAT
ATGTTTCCGCAAGTGAATTACAAGAATGGTTCAAACATAAAAGATTGGCTTATGCAAGAG
GTCCAATTTGTTAAATTCTCTTGGGACAAAATACCACATTAATCTTATTTTTTAAGGTTT
TTAAATTTGGTACAAAAAAAATAAAAATTAAATAAATATTCAATTTCCATTGTCCAAAAT
CCA----------