>SSI805 (SSI805Q) /CSM/SS/SSI8-A/SSI805Q.Seq.d/
XXXXXXXXXXGCATTCACTGTGACATTCGATGAGAAATATGATAAATTAAAAGATGCAGT
ACGTGAAGCCACCAACACTGGTATCTATCACGCTGGTATTGATGCACGTCTCGGTGAGAT
TGGTGCTGCAATCCAAGAGGTTATGGAATCCCACGAAATCGAACTCAATGGTAAAACCTA
CCCAATTCGTTCCATTCGTAATTTGAATGGTCATTCAATTCGTCCATACGTCATTCATGG
TGGTAAAACCGTACCAATCGTTAGAGGTGGTGAAATGACAAAAATGGAAGAAGGTGAATT
TTATGCAATCGAAACTTTTGGTTCCACTGGTAGAGCTCAAGTCATTGAGGATTTGGAATG
TTCTCATTATATGAAAACCGATTATCAAACCACTGTTAGATTACCAAAAGCAAAACAACT
CTTACAATATATCAACAAAAATTATGATACCCTTTGTTTCTGTCGTCGTTGGTTAGATAG
AGCAGGTGAAGATAAACATATATTGGCTTTAAATAATCTTTGTGATTTAGGTATCATTCA
ACGTCATGCACCATTAGTTGATTCAAAAGGTTCTTATGTTGCTCAAAATGAACATACTTT
ATTATTAAAACCAACTGCAAAAGAAGTTTTATCAAGAGGTGATGATTATTAAATTTAGTA
AAAAAAAAAAAA

---FTVTFDEKYDKLKDAVREATNTGIYHAGIDARLGEIGAAIQEVMESHEIELNGKTYP
IRSIRNLNGHSIRPYVIHGGKTVPIVRGGEMTKMEEGEFYAIETFGSTGRAQVIEDLECS
HYMKTDYQTTVRLPKAKQLLQYINKNYDTLCFCRRWLDRAGEDKHILALNNLCDLGIIQR
HAPLVDSKGSYVAQNEHTLLLKPTAKEVLSRGDDY*i**kkk

Frame A:
---hsl*hsmrnmin*kmqyvkpptlvsitlvlmhvsvrlvlqskrlwnptksnsmvkpt
qfvpfvi*mviqfvhtsfmvvkpyqslevvk*qkwkkvnfmqskllvplvelkslriwnv
lii*kpiikplldyqkqnnsynistkimipfvsvvvg*ieqvkiniywl*iifvi*vsfn
vmhh*liqkvlmllkmnilyy*nqlqkkfyqevmiikfskkkk


Frame B:
---ihcdir*ei**ikrcst*shqhwylsrwy*ctsr*dwccnprgygiprnrtqw*nlp
nsfhs*fewsfnssirhsww*nrtnr*rw*ndkngrr*ilcnrnfwfhw*sssh*gfgmf
slyenrlsnhc*itkskttltiyqqkl*yplflsslvr*sr*r*tyigfk*sl*fryhst
sctis*fkrflccsk*tyfiiktnckrsfikr**llnlvkkkk


Frame C:
---FTVTFDEKYDKLKDAVREATNTGIYHAGIDARLGEIGAAIQEVMESHEIELNGKTYP
IRSIRNLNGHSIRPYVIHGGKTVPIVRGGEMTKMEEGEFYAIETFGSTGRAQVIEDLECS
HYMKTDYQTTVRLPKAKQLLQYINKNYDTLCFCRRWLDRAGEDKHILALNNLCDLGIIQR
HAPLVDSKGSYVAQNEHTLLLKPTAKEVLSRGDDY*i**kkk

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SSI805 (SSI805Q) /CSM/SS/SSI8-A/SSI805Q.Seq.d/                       1287   0.0
SSF817 (SSF817Q) /CSM/SS/SSF8-A/SSF817Q.Seq.d/                       1279   0.0
SLH323 (SLH323Q) /CSM/SL/SLH3-A/SLH323Q.Seq.d/                       1279   0.0
AFN321 (AFN321Q) /CSM/AF/AFN3-A/AFN321Q.Seq.d/                       1233   0.0
VFI271 (VFI271Q) /CSM/VF/VFI2-C/VFI271Q.Seq.d/                       1231   0.0
AFL569 (AFL569Q) /CSM/AF/AFL5-C/AFL569Q.Seq.d/                       1231   0.0
AFL741 (AFL741Q) /CSM/AF/AFL7-B/AFL741Q.Seq.d/                       1227   0.0
AFH627 (AFH627Q) /CSM/AF/AFH6-B/AFH627Q.Seq.d/                       1225   0.0
CFC374 (CFC374Q) /CSM/CF/CFC3-D/CFC374Q.Seq.d/                       1223   0.0
VFL742 (VFL742Q) /CSM/VF/VFL7-B/VFL742Q.Seq.d/                       1219   0.0

                                                               Score     E
Sequences producing significant alignments:                    (bits)  Value  N

CF211492|CF211492.1 CAB20007_Ia_Ra_H10 Cabernet Sauvignon Flower bloom - CAB2 Vitis vinifera cDNA clone CAB20007_Ia_Ra_H10 3', mRNA sequence.    64  2e-15  2
BI516879|BI516879.1 BB160023B20D07.5 Bee Brain Normalized Library, BB16 Apis mellifera cDNA clone BB160023B20D07 5', mRNA sequence.    46  2e-14  5
BM534961|BM534961.1 EST587983 tomato breaker fruit Lycopersicon esculentum cDNA clone cLEG64G9 5' end, mRNA sequence.    52  3e-12  3
CF049060|CF049060.1 QCL30c12.yg QCL Zea mays cDNA clone QCL30c12, mRNA sequence.    56  1e-11  2
CD980670|CD980670.1 QAI15b03.yg QAI Zea mays cDNA clone QAI15b03, mRNA sequence.    56  1e-11  2
CD980804|CD980804.1 QAI16h06.yg QAI Zea mays cDNA clone QAI16h06, mRNA sequence.    56  2e-11  2
CD980675|CD980675.1 QAI15b09.yg QAI Zea mays cDNA clone QAI15b09, mRNA sequence.    56  2e-11  2
CD980650|CD980650.1 QAI14h02.yg QAI Zea mays cDNA clone QAI14h02, mRNA sequence.    56  2e-11  2
CD981218|CD981218.1 QAI21e09.yg QAI Zea mays cDNA clone QAI21e09, mRNA sequence.    56  2e-11  2
CD981136|CD981136.1 QAI20d07.yg QAI Zea mays cDNA clone QAI20d07, mRNA sequence.    56  2e-11  2

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC043889_1(BC043889|pid:none) Xenopus laevis methionine aminopep...   299   4e-80
AJ720769_1(AJ720769|pid:none) Gallus gallus mRNA for hypothetica...   299   6e-80
BT072460_1(BT072460|pid:none) Salmo salar clone ssal-rgf-526-141...   297   2e-79
EU967449_1(EU967449|pid:none) Zea mays clone 303197 methionine a...   296   5e-79
BC068393_1(BC068393|pid:none) Danio rerio methionyl aminopeptida...   296   5e-79
BC122516_1(BC122516|pid:none) Xenopus laevis hypothetical protei...   295   8e-79
BC073553_1(BC073553|pid:none) Xenopus laevis hypothetical protei...   295   8e-79
BT045223_1(BT045223|pid:none) Salmo salar clone ssal-rgf-515-269...   295   8e-79
BC070892_1(BC070892|pid:none) Rattus norvegicus methionyl aminop...   294   1e-78
AK165845_1(AK165845|pid:none) Mus musculus lung RCB-0558 LLC cDN...   294   1e-78

 psg: 0.75  gvh: 0.35  alm: 0.49  top: 0.53  tms: 0.00  mit: 0.23  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 52.0 %: cytoplasmic
	 36.0 %: nuclear
	  8.0 %: cytoskeletal
	  4.0 %: peroxisomal

>> prediction for SSI805 is cyt

>SSI805Z.Seq
----------GCATTCACTGTGACATTCGATGAGAAATATGATAAATTAAAAGATGCAGT
ACGTGAAGCCACCAACACTGGTATCTATCACGCTGGTATTGATGCACGTCTCGGTGAGAT
TGGTGCTGCAATCCAAGAGGTTATGGAATCCCACGAAATCGAACTCAATGGTAAAACCTA
CCCAATTCGTTCCATTCGTAATTTGAATGGTCATTCAATTCGTCCATACGTCATTCATGG
TGGTAAAACCGTACCAATCGTTAGAGGTGGTGAAATGACAAAAATGGAAGAAGGTGAATT
TTATGCAATCGAAACTTTTGGTTCCACTGGTAGAGCTCAAGTCATTGAGGATTTGGAATG
TTCTCATTATATGAAAACCGATTATCAAACCACTGTTAGATTACCAAAAGCAAAACAACT
CTTACAATATATCAACAAAAATTATGATACCCTTTGTTTCTGTCGTCGTTGGTTAGATAG
AGCAGGTGAAGATAAACATATATTGGCTTTAAATAATCTTTGTGATTTAGGTATCATTCA
ACGTCATGCACCATTAGTTGATTCAAAAGGTTCTTATGTTGCTCAAAATGAACATACTTT
ATTATTAAAACCAACTGCAAAAGAAGTTTTATCAAGAGGTGATGATTATTAAATTTAGTA
AAAAAAAAAAAA