>SSI755 (SSI755Q) /CSM/SS/SSI7-C/SSI755Q.Seq.d/
XXXXXXXXXXAAATACTCTATCGAATGGTTACCATCCGCTTTTAAATCACTTCATTTCAT
GTGTTGGAGTTGTATCAAACCAAAGATTCATAAATCTGTTGATTTCTATGCCAATGGTGG
TAGTAAAGGTGGTCAAGATATGGATATTGTTCTATTGAAATTAAATCCAGATGGTACAAA
CACTATCCTTCATACCTATAAACTAAGTCAACTTTTAGGTGGAAAAGTAGTTCCAAAATC
TGAATGGGTTAAAGTGGTTTTGGATTTAACAACTCTTCCAAAAGATGAAGAATATGATGG
TTTTTGGTTAAAATCTGATACAAGTCAACCTTCAATGTATGTTGATGAAATTACAATTCA
AGCAATTCATGAACCACCAACTCAAATTCCAGATTCTCAATGGGAAGAACAAAATGGTGA
TAGTTCAATAGGTTCAATAATTACTGTAAATTTAATTTTATTTATATTTACTTTATTATC
ATTATTATTATAAAAATATAAAAAAAAAAAAAAAACAATGGTTATTATATAAAATATAAA
TAAGATCTAAAAATAAAAATAAAAAAAAAAAAAAAAAAGAAATCCAATGCTAA

---YSIEWLPSAFKSLHFMCWSCIKPKIHKSVDFYANGGSKGGQDMDIVLLKLNPDGTNT
ILHTYKLSQLLGGKVVPKSEWVKVVLDLTTLPKDEEYDGFWLKSDTSQPSMYVDEITIQA
IHEPPTQIPDSQWEEQNGDSSIGSIITVNLILFIFTLLSLLL*kykkkkktmvii*nink
i*k*k*kkkkkrnpml

Frame A:
---ntlsngyhpllnhfiscvgvvsnqrfinllismpmvvvkvvkiwilfy*n*iqmvqt
lsfipin*vnf*vek*fqnlnglkwfwi*qlfqkmknmmvfg*nliqvnlqcmlmklqfk
qfmnhqlkfqilngknkmvivq*vq*ll*i*fylyllyyhyyyknikkkkkqwllyki*i
rsknknkkkkkkeiqc*


Frame B:
---ilyrmvtirf*itsfhvlelyqtkds*ic*flcqww**rwsrygycsieiksrwykh
ypsyl*tkstfrwkssski*mg*sgfgfnnsskr*ri*wflvki*ykstfnvc**nynss
ns*ttnsnsrfsmgrtkw**fnrfnnyckfnfiyiyfiiiiiiki*kkkknngyyikyk*
dlkikikkkkkkksna


Frame C:
---YSIEWLPSAFKSLHFMCWSCIKPKIHKSVDFYANGGSKGGQDMDIVLLKLNPDGTNT
ILHTYKLSQLLGGKVVPKSEWVKVVLDLTTLPKDEEYDGFWLKSDTSQPSMYVDEITIQA
IHEPPTQIPDSQWEEQNGDSSIGSIITVNLILFIFTLLSLLL*kykkkkktmvii*nink
i*k*k*kkkkkrnpml

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SSI755 (SSI755Q) /CSM/SS/SSI7-C/SSI755Q.Seq.d/                        969   0.0
SSE576 (SSE576Q) /CSM/SS/SSE5-D/SSE576Q.Seq.d/                        946   0.0
SLI848 (SLI848Q) /CSM/SL/SLI8-B/SLI848Q.Seq.d/                        946   0.0
SLC333 (SLC333Q) /CSM/SL/SLC3-B/SLC333Q.Seq.d/                        946   0.0
SLA620 (SLA620Q) /CSM/SL/SLA6-A/SLA620Q.Seq.d/                        946   0.0
SSK728 (SSK728Q) /CSM/SS/SSK7-B/SSK728Q.Seq.d/                        930   0.0
SLI371 (SLI371Q) /CSM/SL/SLI3-C/SLI371Q.Seq.d/                        894   0.0
SSC427 (SSC427Q) /CSM/SS/SSC4-B/SSC427Q.Seq.d/                        783   0.0
AHH764 (AHH764Q) /CSM/AH/AHH7-C/AHH764Q.Seq.d/                        424   e-118
CHK493 (CHK493Q) /CSM/CH/CHK4-D/CHK493Q.Seq.d/                        406   e-112

                                                               Score     E
Sequences producing significant alignments:                    (bits)  Value  N

AC137512|AC137512.1 Mus musculus chromosome UNK clone RP24-323C12, WORKING DRAFT SEQUENCE, 4 unordered pieces.    58  4e-05  2
AX348322|AX348322.1 Sequence 17 from Patent WO0202806.            38  8e-05  5
AX345120|AX345120.1 Sequence 191 from Patent WO0200928.           38  8e-05  5
AC084401|AC084401.2 Mus musculus chromosome 12 clone RP23-345F9 strain C57BL6/J, WORKING DRAFT SEQUENCE, 19 unordered pieces.    58  1e-04  1
AE014827|AE014827.1 Plasmodium falciparum 3D7 chromosome 14 section 12 of 13 of the complete sequence.    40  2e-04  7
AL844505|AL844505.1 Plasmodium falciparum chromosome  6.          44  3e-04  4
AE014834|AE014834.1 Plasmodium falciparum 3D7 chromosome 10 section 6 of 7 of the complete sequence.    44  5e-04  7
BX004850|BX004850.6 Zebrafish DNA sequence *** SEQUENCING IN PROGRESS *** from clone CH211-51M24.    40  7e-04  4
AE014831|AE014831.1 Plasmodium falciparum 3D7 chromosome 10 section 3 of 7 of the complete sequence.    42  0.001  6
AL935052|AL935052.8 Zebrafish DNA sequence from clone CH211-168J10 in linkage group 12.    36  0.003  5

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

(P22699) RecName: Full=Endoglucanase;          EC=3.2.1.4; AltNa...    49   8e-05
A41106(A41106) GTP-binding protein alpha chain gpa1 - fission ye...    34   3.4
(P27584) RecName: Full=Guanine nucleotide-binding protein alpha-...    34   3.4
AM920437_837(AM920437|pid:none) Penicillium chrysogenum Wisconsi...    33   4.4
AB465596_1(AB465596|pid:none) Nilaparvata lugens mRNA for lipoph...    33   5.7
BX842632_9(BX842632|pid:none) Neurospora crassa DNA linkage grou...    33   5.7
CP000699_756(CP000699|pid:none) Sphingomonas wittichii RW1, comp...    32   9.8

 psg: 0.90  gvh: 0.52  alm: 0.19  top: 0.80  tms: 0.07  mit: 0.25  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.33  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 1.00  tyr: 0.00  leu: 0.07  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 1.00
 m3a: 0.00  m3b: 0.00  m_ : 0.00 

	 24.0 %: cytoplasmic
	 20.0 %: nuclear
	 12.0 %: Golgi
	 12.0 %: mitochondrial
	 12.0 %: vesicles of secretory system
	  8.0 %: endoplasmic reticulum
	  4.0 %: extracellular, including cell wall
	  4.0 %: cytoskeletal
	  4.0 %: plasma membrane

>> prediction for SSI755 is cyt

>SSI755Z.Seq
----------AAATACTCTATCGAATGGTTACCATCCGCTTTTAAATCACTTCATTTCAT
GTGTTGGAGTTGTATCAAACCAAAGATTCATAAATCTGTTGATTTCTATGCCAATGGTGG
TAGTAAAGGTGGTCAAGATATGGATATTGTTCTATTGAAATTAAATCCAGATGGTACAAA
CACTATCCTTCATACCTATAAACTAAGTCAACTTTTAGGTGGAAAAGTAGTTCCAAAATC
TGAATGGGTTAAAGTGGTTTTGGATTTAACAACTCTTCCAAAAGATGAAGAATATGATGG
TTTTTGGTTAAAATCTGATACAAGTCAACCTTCAATGTATGTTGATGAAATTACAATTCA
AGCAATTCATGAACCACCAACTCAAATTCCAGATTCTCAATGGGAAGAACAAAATGGTGA
TAGTTCAATAGGTTCAATAATTACTGTAAATTTAATTTTATTTATATTTACTTTATTATC
ATTATTATTATAAAAATATAAAAAAAAAAAAAAAACAATGGTTATTATATAAAATATAAA
TAAGATCTAAAAATAAAAATAAAAAAAAAAAAAAAAAAGAAATCCAATGCTAA