>SSI701 (SSI701Q) /CSM/SS/SSI7-A/SSI701Q.Seq.d/
TGTGATTAAAAAATTAATAATAGTTCTTAAATAGTTTTTAAAATATTAATACAAATATTA
AATAAATAGAAAAAAAAAAAAACCATCTTTATATATAAATATTTTTTTTTTAAAAAATAA
AAAATAAAAATAAAATAAAAATATAAATTATTATTAATTAAAGAAATATAAAAATGATCA
AAATAAATAAACCTAGTTTTTTAATTATTTTTTTAATAGTATTTTCAATTATAAATTTTA
AAGATATAGTAGTAAAAGCAGATGATACAACAACACCAGCACCAACAACAACAACAACAC
AACCAACATCAACACCAACTCAAAATTTAACAGTAAAATATAGTTTTGAAATTTCACAAT
TAAGTCAAGATGATAAATATTATAATGCAACATTACAAGGATGGATAGATAGTGATGGTA
ATATATTTCATTATTCAAGTTGTATAGATAATGTTGAAAAGAAATGCCCAATGGCATCAT
ACAGAGATAACATTTCAAGAATTCATTATGTTGAATATTGTGTTCCAATTGATTATGATT
GTTGTGGTTGTAACACTGTTGGTCAACCAGTTTATATTAAAGGTGAAAAGAATACAGTTC
TTACAAAAGTTGGAAGTTGTTTTGGTTGTCCTTCAGATTCAGTATGTCXXXXXXXXXX

*lkn***flnsf*nintnik*iekkknhlyi*ifff*kiknknkiki*iiin*RNIKMIK
INKPSFLIIFLIVFSIINFKDIVVKADDTTTPAPTTTTTQPTSTPTQNLTVKYSFEISQL
SQDDKYYNATLQGWIDSDGNIFHYSSCIDNVEKKCPMASYRDNISRIHYVEYCVPIDYDC
CGCNTVGQPVYIKGEKNTVLTKVGSCFGCPSDSVC---

Frame A:
cd*kinnss*ivfkiliqilnk*kkkktifiykyfffkk*kikik*kyklllikei*k*s
k*inlvf*lff**yfql*ilki***kqmiqqhqhqqqqqhnqhqhqlki*q*nivlkfhn
*vkminiimqhykdg*ivmviyfiiqvv*imlkrnaqwhhteitfqefimlnivfqlimi
vvvvtllvnqfilkvkriqflqklevvlvvlqiqy---


Frame B:
vikkliivlk*flky*yky*inrkkkkpslyinifflknkk*k*nkninyy*lkkykndq
nk*t*ffnyffnsifnykf*ryssksr*ynntstnnnnnttnintnskfnski*f*nfti
ksr**il*cnitrmdr**w*yislfklyr*c*kempngiiqr*hfknslc*ilcsn*l*l
lwl*hcwstsly*r*keyssykswklfwlsfrfsm---


Frame C:
*lkn***flnsf*nintnik*iekkknhlyi*ifff*kiknknkiki*iiin*RNIKMIK
INKPSFLIIFLIVFSIINFKDIVVKADDTTTPAPTTTTTQPTSTPTQNLTVKYSFEISQL
SQDDKYYNATLQGWIDSDGNIFHYSSCIDNVEKKCPMASYRDNISRIHYVEYCVPIDYDC
CGCNTVGQPVYIKGEKNTVLTKVGSCFGCPSDSVC---

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SSI701 (SSI701Q) /CSM/SS/SSI7-A/SSI701Q.Seq.d/                        652   0.0
SSL146 (SSL146Q) /CSM/SS/SSL1-B/SSL146Q.Seq.d/                        650   0.0
SSK336 (SSK336Q) /CSM/SS/SSK3-B/SSK336Q.Seq.d/                        650   0.0
SSG252 (SSG252Q) /CSM/SS/SSG2-C/SSG252Q.Seq.d/                        650   0.0
SSH317 (SSH317Q) /CSM/SS/SSH3-A/SSH317Q.Seq.d/                        597   e-170
SSD281 (SSD281Q) /CSM/SS/SSD2-D/SSD281Q.Seq.d/                        496   e-139
SSE387 (SSE387Q) /CSM/SS/SSE3-D/SSE387Q.Seq.d/                        426   e-118
SSG831 (SSG831Q) /CSM/SS/SSG8-B/SSG831Q.Seq.d/                         58   2e-07
VHG783 (VHG783Q) /CSM/VH/VHG7-D/VHG783Q.Seq.d/                         42   0.011
SSC467 (SSC467Q) /CSM/SS/SSC4-C/SSC467Q.Seq.d/                         42   0.011

                                                               Score     E
Sequences producing significant alignments:                    (bits)  Value  N

AL928864|AL928864.11 Zebrafish DNA sequence from clone CH211-10P21.    36  0.043  4
AE014843|AE014843.1 Plasmodium falciparum 3D7 chromosome 11 section 8 of 8 of the complete sequence.    46  0.044  2
AL844505|AL844505.1 Plasmodium falciparum chromosome  6.          48  0.050  2
AC119213|AC119213.3 Mus musculus clone RP24-196G20, WORKING DRAFT SEQUENCE, 2 ordered pieces.    42  0.086  3
AE014852|AE014852.2 Plasmodium falciparum 3D7 chromosome 12, section 9 of 9 of the complete sequence.    46  0.10  4
BZ510027|BZ510027.1 BOMSB93TR BO_2_3_KB Brassica oleracea genomic clone BOMSB93, DNA sequence.    42  0.13  2
AE014845|AE014845.1 Plasmodium falciparum 3D7 chromosome 12, section 2 of 9 of the complete sequence.    48  0.14  1
AE014847|AE014847.1 Plasmodium falciparum 3D7 chromosome 12, section 4 of 9 of the complete sequence.    48  0.14  1
AL782786|AL782786.1 Xenopus tropicalis EST, clone TGas078f08 5'.    48  0.14  1
AL783571|AL783571.1 Xenopus tropicalis EST, clone TNeu068c17 5'.    48  0.14  1

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL844509_46(AL844509|pid:none) Plasmodium falciparum 3D7 chromos...    36   0.86
FM995164_1(FM995164|pid:none) Nakaseomyces delphensis complete m...    36   0.86
AE014187_324(AE014187|pid:none) Plasmodium falciparum 3D7 chromo...    35   2.5
AL844503_189(AL844503|pid:none) Plasmodium falciparum 3D7 chromo...    35   2.5
AE014188_212(AE014188|pid:none) Plasmodium falciparum 3D7 chromo...    35   2.5
CR388080_1(CR388080|pid:none) Zebrafish DNA sequence from clone ...    34   3.3
CP000382_2047(CP000382|pid:none) Clostridium novyi NT, complete ...    33   7.2
AE001362_79(AE001362|pid:none) Plasmodium falciparum 3D7 chromos...    33   7.3
AC116982_42(AC116982|pid:none) Dictyostelium discoideum chromoso...    33   7.3
CP000896_1207(CP000896|pid:none) Acholeplasma laidlawii PG-8A, c...    33   9.5

 psg: 1.01  gvh: 0.45  alm: 0.23  top: 0.13  tms: 0.07  mit: 0.34  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 1.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 1.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 0.00 

	 28.0 %: endoplasmic reticulum
	 20.0 %: mitochondrial
	 16.0 %: nuclear
	 16.0 %: cytoplasmic
	  8.0 %: Golgi
	  4.0 %: extracellular, including cell wall
	  4.0 %: plasma membrane
	  4.0 %: vesicles of secretory system

>> prediction for SSI701 is end

>SSI701F.Seq
TGTGATTAAAAAATTAATAATAGTTCTTAAATAGTTTTTAAAATATTAATACAAATATTA
AATAAATAGAAAAAAAAAAAAACCATCTTTATATATAAATATTTTTTTTTTAAAAAATAA
AAAATAAAAATAAAATAAAAATATAAATTATTATTAATTAAAGAAATATAAAAATGATCA
AAATAAATAAACCTAGTTTTTTAATTATTTTTTTAATAGTATTTTCAATTATAAATTTTA
AAGATATAGTAGTAAAAGCAGATGATACAACAACACCAGCACCAACAACAACAACAACAC
AACCAACATCAACACCAACTCAAAATTTAACAGTAAAATATAGTTTTGAAATTTCACAAT
TAAGTCAAGATGATAAATATTATAATGCAACATTACAAGGATGGATAGATAGTGATGGTA
ATATATTTCATTATTCAAGTTGTATAGATAATGTTGAAAAGAAATGCCCAATGGCATCAT
ACAGAGATAACATTTCAAGAATTCATTATGTTGAATATTGTGTTCCAATTGATTATGATT
GTTGTGGTTGTAACACTGTTGGTCAACCAGTTTATATTAAAGGTGAAAAGAATACAGTTC
TTACAAAAGTTGGAAGTTGTTTTGGTTGTCCTTCAGATTCAGTATGTC----------