>SSI621 (SSI621Q) /CSM/SS/SSI6-A/SSI621Q.Seq.d/
XXXXXXXXXXGCTATTATTGAGGGTAAAGTACTTTGTGTTCATGGTGGTTTATCACCAAA
AGTACGTACTTTGGATCAAATTAGAATTATTTCAAGAAATTTAGAGATTCCACATGAAGG
TCCATTCTGTGATTTAATGTGGTCAGATCCAGAAGATATTGAACAATGGCAACCATCACC
AAGAGGTGCAGGTTGGTTATTCGGAAGTAAAGTCACTGCAGAGTTTGAACATATCAATGG
TCTTAACCTCATTTGTCGTGCTCATCAATTGGTACAAGAAGGTTATAGATATATGTTTGA
TAATAGTTTAGTCACTGTTTGGTCTGCTCCAAACTATTGTTATAGATGTGGTAATGTCGC
TTCCATCCTTTCACTCAATGAAAACTTGGATAGAGATTTCAAAATTTTCCAAGCCGTTCA
AGAAGAAAGAAATATACCAACTCGTACAACTATGCAATATTTCTTTTAAATTATTAATTT
TATTCATCATTTAAAAAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

---IIEGKVLCVHGGLSPKVRTLDQIRIISRNLEIPHEGPFCDLMWSDPEDIEQWQPSPR
GAGWLFGSKVTAEFEHINGLNLICRAHQLVQEGYRYMFDNSLVTVWSAPNYCYRCGNVAS
ILSLNENLDRDFKIFQAVQEERNIPTRTTMQYFF*iinfihhlkrkkkkkkkkk

Frame A:
---lllrvkyfvfmvvyhqkyvlwiklelfqei*rfhmkvhsvi*cgqiqkilnngnhhq
evqvgysevkslqslnismvltsfvvlinwykkvidicliiv*slfgllqtividvvmsl
psfhsmktwieiskfskpfkkkeiyqlvqlcnisfkllilfii*kekkkkkkkkk


Frame B:
---yy*g*stlcswwfitkstyfgsn*nyfkkfrdst*rsil*fnvvrsrry*tmatitk
rcrlvirk*shcrv*tyqws*phlscssigtrrl*iyv***fshclvcsklll*mw*crf
hpftq*klg*rfqnfpsrsrrkkytnsynyaifllny*fyssfkkkkkkkkkkk


Frame C:
---IIEGKVLCVHGGLSPKVRTLDQIRIISRNLEIPHEGPFCDLMWSDPEDIEQWQPSPR
GAGWLFGSKVTAEFEHINGLNLICRAHQLVQEGYRYMFDNSLVTVWSAPNYCYRCGNVAS
ILSLNENLDRDFKIFQAVQEERNIPTRTTMQYFF*iinfihhlkrkkkkkkkkk

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SSI621 (SSI621Q) /CSM/SS/SSI6-A/SSI621Q.Seq.d/                        955   0.0
SSK166 (SSK166Q) /CSM/SS/SSK1-C/SSK166Q.Seq.d/                        948   0.0
SSJ104 (SSJ104Q) /CSM/SS/SSJ1-A/SSJ104Q.Seq.d/                        948   0.0
SSI264 (SSI264Q) /CSM/SS/SSI2-C/SSI264Q.Seq.d/                        948   0.0
SSD819 (SSD819Q) /CSM/SS/SSD8-A/SSD819Q.Seq.d/                        948   0.0
SSB227 (SSB227Q) /CSM/SS/SSB2-B/SSB227Q.Seq.d/                        948   0.0
SSA803 (SSA803Q) /CSM/SS/SSA8-A/SSA803Q.Seq.d/                        948   0.0
VSJ277 (VSJ277Q) /CSM/VS/VSJ2-D/VSJ277Q.Seq.d/                        912   0.0
CFA508 (CFA508Q) /CSM/CF/CFA5-A/CFA508Q.Seq.d/                        682   0.0
SSH859 (SSH859Q) /CSM/SS/SSH8-C/SSH859Q.Seq.d/                        609   e-173

                                                               Score     E
Sequences producing significant alignments:                    (bits)  Value  N

AF176121|AF176121.1 Dictyostelium discoideum protein phosphatase 6 catalytic subunit (pppD) mRNA, complete cds.   948  0.0  1
AC115577|AC115577.2 Dictyostelium discoideum chromosome 2 map 4657875-4914984 strain AX4, complete sequence.   934  0.0  1
AF161253|AF161253.1 Dictyostelium discoideum protein phosphatase 4 catalytic subunit (pppC) mRNA, complete cds.    92  3e-41  5
AC115607|AC115607.2 Dictyostelium discoideum chromosome 2 map 4559693-4624405 strain AX4, complete sequence.    92  1e-35  6
AZ547487|AZ547487.1 ENTEE91TR Entamoeba histolytica Sheared DNA Entamoeba histolytica genomic, DNA sequence.    80  2e-30  3
AL439996|AL439996.1 T3 end of clone BD0AA009C10 of library BD0AA from strain CBS 94 of  Candida tropicalis.    64  2e-21  4
AZ683356|AZ683356.1 ENTIR84TR Entamoeba histolytica Sheared DNA Entamoeba histolytica genomic, DNA sequence.    72  5e-21  3
AF138278|AF138278.1 Dictyostelium discoideum protein phosphatase 2A catalytic subunit mRNA, complete cds.    60  3e-15  3
AL409842|AL409842.1 T3 end of clone XAV0AA002C07 of library XAV0AA from strain CBS 379  of Saccharomyces exiguus.    54  4e-15  4
Z22596|Z22596.1 A.thaliana protein phosphatase mRNA.              66  5e-12  3

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF176121_1(AF176121|pid:none) Dictyostelium discoideum protein p...   321   6e-87
(Q9U9A3) RecName: Full=Serine/threonine-protein phosphatase 6 ca...   319   3e-86
(Q8LSN3) RecName: Full=Phytochrome-associated serine/threonine p...   239   4e-62
T17012(T17012) phosphoprotein phosphatase (EC 3.1.3.16) - apple ...   238   9e-62
(Q9SX52) RecName: Full=Phytochrome-associated serine/threonine p...   237   1e-61
EF146829_1(EF146829|pid:none) Populus trichocarpa clone WS01214_...   237   1e-61
(Q9LHE7) RecName: Full=Phytochrome-associated serine/threonine p...   236   2e-61
(P36614) RecName: Full=Serine/threonine-protein phosphatase ppe1...   228   7e-59
CR954218_124(CR954218|pid:none) Ostreococcus tauri strain OTTH05...   228   9e-59
(O00743) RecName: Full=Serine/threonine-protein phosphatase 6 ca...   224   8e-58

 psg: 0.88  gvh: 0.55  alm: 0.48  top: 0.63  tms: 0.00  mit: 0.17  mip: 0.04
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 44.0 %: cytoplasmic
	 20.0 %: nuclear
	 12.0 %: cytoskeletal
	  8.0 %: mitochondrial
	  4.0 %: Golgi
	  4.0 %: endoplasmic reticulum
	  4.0 %: vacuolar
	  4.0 %: vesicles of secretory system

>> prediction for SSI621 is cyt

>SSI621Z.Seq
----------GCTATTATTGAGGGTAAAGTACTTTGTGTTCATGGTGGTTTATCACCAAA
AGTACGTACTTTGGATCAAATTAGAATTATTTCAAGAAATTTAGAGATTCCACATGAAGG
TCCATTCTGTGATTTAATGTGGTCAGATCCAGAAGATATTGAACAATGGCAACCATCACC
AAGAGGTGCAGGTTGGTTATTCGGAAGTAAAGTCACTGCAGAGTTTGAACATATCAATGG
TCTTAACCTCATTTGTCGTGCTCATCAATTGGTACAAGAAGGTTATAGATATATGTTTGA
TAATAGTTTAGTCACTGTTTGGTCTGCTCCAAACTATTGTTATAGATGTGGTAATGTCGC
TTCCATCCTTTCACTCAATGAAAACTTGGATAGAGATTTCAAAATTTTCCAAGCCGTTCA
AGAAGAAAGAAATATACCAACTCGTACAACTATGCAATATTTCTTTTAAATTATTAATTT
TATTCATCATTTAAAAAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAA