>SSI596 (SSI596Q) /CSM/SS/SSI5-D/SSI596Q.Seq.d/
ATTAAAGACATCAAAAAATAAATAAAAAAATAAAACTATAGTAATAACACAAATAAAGCA
CTATACAAAAAAAAAAAACTACATAATATTTAATTGGGTGATTTAATAATAATAAATAAA
AAAAAAAAATAAAAAAGATGGAGGATAATTATGAAGAATATGATAATGCTTTTGTTGGTA
ATTTAGGTGATATGGGTTATGGTGAAGATACACAAGCTGCAGGCGAACCAGCTTCACAAA
TTGAAAATAAACCAAAAATATTTTTAATGGGTTTAAAAAGATCAGGTAAATCATCAATTC
AAAAAGTTGTTTTTCATAAAATGTTACCAAATGAAACTTTATTTTTAGAAAGTACAAGTA
AAGTTGTAAAGAATGATATTTCAAATTCATCATTCGTTCAATTTCAAATTTGGGATTTCC
CAGGTCAATTAGATTTCTTTGATCCATCATTCGATTATGAATACATTCTCAATAATTGTG
GTGCCATTGTTTTCGTCATTGATGCTCAAGATGAAATCATTGAAGCATTACAAAAACTTC
ATCAAACTATTGCTAAAGTTTATCAAATTAACCCAAATATTCACTTTGAAGTATTCATTC
ACAAATCAGATGGTTTATCAGACGATCACAAAATTGATAGACAAAGAGATATTCAACAAA
AAACAACAGAAGAATTAGCAGATGCAAATATTAATGTACATCCAAGTTTCTATGTGACXX
XXXXXXXXTTATGATCATTCAATCTTGGAAGCTTTTTCAAAGGTTATTCAAAAACTTATT
CCTCAACTTCCAACTTTAGAAAATTTATTAGATGTTTTCATTTCTAGATCAAGAATTGAA
AAAGCATTTTTAGTTGATGTTGTTAGTAAAATTTATGTTGCTACTGATAATTCACCAGTT
GATATGCAAACTTATGAATTATGTAGTGATATGATTGATGTAGTTATTGATGTTTCATGT
ATCTATGGTCTTAAAGAAGAAGAGGAAGGTTTAGGTTATGATCAAGAATCACACTCTGTT
ATTAAATTAAATAATGGTATGGTTTTATATTTAAAGGAAGTTAACAAATATTTAGCATTA
GTTTGTTTACTTCGTGAATCAAACTTTGATAAACATGGTTTAATTGATTACAATTTTATT
TGTTTCAAAAAAGCAATTGAAGAAGTTTTCAGTAGAAAGACAACTAAAGCTGGTGCAAAG
AAAACTATTAAGAAAGCAAACTAAATAAGTTTGACTTTACCTTAATAAAGTTTAGGTACA
CCTTTTAAAAAAAAAAAATAATATAAAATAATAAAAAAATAAAAAAAAAATAAAAAAAAT
AAAAAAAAATAAAAAGAAAATAGTAAAAAAAAAAAAAAAGGGGNACCGCNNCCTNNCNNG

*rhqkinkkikl***hk*stiqkkktt*ylig*fnnnk*KKKIKKMEDNYEEYDNAFVGN
LGDMGYGEDTQAAGEPASQIENKPKIFLMGLKRSGKSSIQKVVFHKMLPNETLFLESTSK
VVKNDISNSSFVQFQIWDFPGQLDFFDPSFDYEYILNNCGAIVFVIDAQDEIIEALQKLH
QTIAKVYQINPNIHFEVFIHKSDGLSDDHKIDRQRDIQQKTTEELADANINVHPSFYV--
-

---YDHSILEAFSKVIQKLIPQLPTLENLLDVFISRSRIEKAFLVDVVSKIYVATDNSPV
DMQTYELCSDMIDVVIDVSCIYGLKEEEEGLGYDQESHSVIKLNNGMVLYLKEVNKYLAL
VCLLRESNFDKHGLIDYNFICFKKAIEEVFSRKTTKAGAKKTIKKAN*isltlp**slgt
pfkkkk*ykiikk*kknkknkkk*kenskkkkkgxpxpxx

Frame A:
ikdikk*ikk*nysnntnkalykkkklhni*lgdliiinkkkk*krwriimknmimlllv
i*viwvmvkihklqanqlhklkinqkyf*wv*kdqvnhqfkklffikcyqmklyf*kvqv
kl*rmifqihhsfnfkfgisqvn*islihhsimntfsiivvplfsslmlkmkslkhyknf
iklllkfikltqiftlkysftnqmvyqtitklidkeifnkkqqkn*qmqilmyiqvsm*-
--

---l*sfnlgsffkgysktysstsnfrkfircfhf*ikn*ksifs*cc**nlccy**fts
*yanl*im**yd*csy*cfmylws*rrrgrfrl*sritlcy*ik*wygfifkgs*qifsi
slfts*ikl**twfn*lqfylfqksn*rsfq*kdn*swckeny*esklnkfdftlikfry
tf*kkkii*nnkkikkk*kk*kkikrk**kkkkrgtaxxx

Frame B:
lktsknk*knktivitqikhytkkknyiifnwvi****ikkknkkdgg*l*ri**cfcw*
fr*yglw*rytscrrtsftn*k*tknifngfkkir*iinskscfs*nvtk*nfifrkyk*
scke*yfkfiirsisnlgfprsirfl*siirl*ihsq*lwchcfrh*csr*nh*sitkts
snyc*slsn*pkysl*sihsqirwfirrsqn**tkrystknnrrisrcky*ctskflcd-
--

---YDHSILEAFSKVIQKLIPQLPTLENLLDVFISRSRIEKAFLVDVVSKIYVATDNSPV
DMQTYELCSDMIDVVIDVSCIYGLKEEEEGLGYDQESHSVIKLNNGMVLYLKEVNKYLAL
VCLLRESNFDKHGLIDYNFICFKKAIEEVFSRKTTKAGAKKTIKKAN*isltlp**slgt
pfkkkk*ykiikk*kknkknkkk*kenskkkkkgxpxpxx

Frame C:
*rhqkinkkikl***hk*stiqkkktt*ylig*fnnnk*KKKIKKMEDNYEEYDNAFVGN
LGDMGYGEDTQAAGEPASQIENKPKIFLMGLKRSGKSSIQKVVFHKMLPNETLFLESTSK
VVKNDISNSSFVQFQIWDFPGQLDFFDPSFDYEYILNNCGAIVFVIDAQDEIIEALQKLH
QTIAKVYQINPNIHFEVFIHKSDGLSDDHKIDRQRDIQQKTTEELADANINVHPSFYV--
-

---miiqswklfqrlfknlflnfql*kiy*mfsfldqelkkhf*lmllvkfmllliihql
icklmnyvvi*lm*llmfhvsmvlkkkrkv*vmiknhtllln*imvwfyi*rkltni*h*
fvyfvnqtlinmv*litilfvskkqlkkfsverqlklvqrkllrkqtk*v*lylnkv*vh
llkkknnik**knkkkikkikknkkkivkkkkkgxrxlx

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SSI596 (SSI596Q) /CSM/SS/SSI5-D/SSI596Q.Seq.d/                       2181   0.0
SSF223 (SSF223Q) /CSM/SS/SSF2-A/SSF223Q.Seq.d/                       1136   0.0
VFD459 (VFD459Q) /CSM/VF/VFD4-C/VFD459Q.Seq.d/                       1120   0.0
SSF789 (SSF789Q) /CSM/SS/SSF7-D/SSF789Q.Seq.d/                       1092   0.0
FC-IC0574 (FC-IC0574Q) /CSM/FC-IC/FC-IC0574Q.Seq.d/                  1041   0.0
SSC424 (SSC424Q) /CSM/SS/SSC4-A/SSC424Q.Seq.d/                       1027   0.0
SFF646 (SFF646Q) /CSM/SF/SFF6-B/SFF646Q.Seq.d/                       1017   0.0
VFJ295 (VFJ295Q) /CSM/VF/VFJ2-D/VFJ295Q.Seq.d/                        957   0.0
VSK323 (VSK323Q) /CSM/VS/VSK3-A/VSK323Q.Seq.d/                        833   0.0
VFL337 (VFL337Q) /CSM/VF/VFL3-B/VFL337Q.Seq.d/                        446   e-124

                                                               Score     E
Sequences producing significant alignments:                    (bits)  Value  N

W35337|W35337.1 zc71e12.r1 Soares_fetal_heart_NbHH19W Homo sapiens cDNA clone IMAGE:327790 5', mRNA sequence.    66  1e-17  3
AI028080|AI028080.1 ow51a03.x1 Soares_parathyroid_tumor_NbHPA Homo sapiens cDNA clone IMAGE:1650316 3' similar to SW:YG3T_YEAST P53290 HYPOTHETICAL 38.6 KD PROTEIN IN TIF4631-KRE11 INTERGENIC REGION. ;, mRNA sequence.    66  2e-17  3
AA454046|AA454046.1 zx48c06.r1 Soares_testis_NHT Homo sapiens cDNA clone IMAGE:795466 5' similar to TR:E243550 E243550 CHROMOSOME VII READING FRAME ORF YGR163W. ;, mRNA sequence.    66  2e-17  3
AX427441|AX427441.1 Sequence 14 from Patent WO0123558.            66  8e-17  3
AX405774|AX405774.1 Sequence 189 from Patent WO0222660.           66  1e-16  3
AL523998|AL523998.2 human full-length cDNA 3-PRIME end of clone CS0DC003YL10 of  NEUROBLASTOMA COT 25-NORMALIZED of Homo sapiens (human).    66  1e-16  3
BC003088|BC003088.1 Homo sapiens, hypothetical GTP-binding protein DKFZp761H171, clone MGC:1129, mRNA, complete cds.    66  1e-16  3
AF272036|AF272036.1 Homo sapiens Rag D mRNA, complete cds.        66  2e-16  3
BG027411|BG027411.1 602296136F1 NIH_MGC_86 Homo sapiens cDNA clone IMAGE:4390713 5', mRNA sequence.    64  3e-16  3
AL137502| (AL138717) bA11D8.2.2 (novel protein (translation of cDNA DKFZp761H171 (Em:AL137502)) (possible GTP bi, mRNA sequence.    66  1e-15  3

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR382130_423(CR382130|pid:none) Yarrowia lipolytica strain CLIB1...   159   2e-73
AE016820_324(AE016820|pid:none) Ashbya gossypii (= Eremothecium ...   154   3e-71
CR380951_134(CR380951|pid:none) Candida glabrata strain CBS138 c...   149   6e-71
(P53290) RecName: Full=GTP-binding protein GTR2;  &AB015239_1(AB...   152   2e-69
CR382133_508(CR382133|pid:none) Debaryomyces hansenii strain CBS...   153   5e-69
FM992695_281(FM992695|pid:none) Candida dubliniensis CD36 chromo...   159   7e-69
BC154154_1(BC154154|pid:none) Danio rerio Ras-related GTP bindin...   246   1e-63
BC095626_1(BC095626|pid:none) Danio rerio Ras-related GTP bindin...   246   1e-63
BC123045_1(BC123045|pid:none) Xenopus tropicalis Ras-related GTP...   245   2e-63
AK166658_1(AK166658|pid:none) Mus musculus 5 days embryo whole b...   241   4e-62

 psg: 0.39  gvh: 0.35  alm: 0.39  top: 0.53  tms: 0.00  mit: 0.22  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.40  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 60.0 %: cytoplasmic
	 28.0 %: nuclear
	  8.0 %: mitochondrial
	  4.0 %: cytoskeletal

>> prediction for SSI596 is cyt

>SSI596F.Seq
ATTAAAGACATCAAAAAATAAATAAAAAAATAAAACTATAGTAATAACACAAATAAAGCA
CTATACAAAAAAAAAAAACTACATAATATTTAATTGGGTGATTTAATAATAATAAATAAA
AAAAAAAAATAAAAAAGATGGAGGATAATTATGAAGAATATGATAATGCTTTTGTTGGTA
ATTTAGGTGATATGGGTTATGGTGAAGATACACAAGCTGCAGGCGAACCAGCTTCACAAA
TTGAAAATAAACCAAAAATATTTTTAATGGGTTTAAAAAGATCAGGTAAATCATCAATTC
AAAAAGTTGTTTTTCATAAAATGTTACCAAATGAAACTTTATTTTTAGAAAGTACAAGTA
AAGTTGTAAAGAATGATATTTCAAATTCATCATTCGTTCAATTTCAAATTTGGGATTTCC
CAGGTCAATTAGATTTCTTTGATCCATCATTCGATTATGAATACATTCTCAATAATTGTG
GTGCCATTGTTTTCGTCATTGATGCTCAAGATGAAATCATTGAAGCATTACAAAAACTTC
ATCAAACTATTGCTAAAGTTTATCAAATTAACCCAAATATTCACTTTGAAGTATTCATTC
ACAAATCAGATGGTTTATCAGACGATCACAAAATTGATAGACAAAGAGATATTCAACAAA
AAACAACAGAAGAATTAGCAGATGCAAATATTAATGTACATCCAAGTTTCTATGTGAC--
--------

>SSI596Z.Seq
----------TTATGATCATTCAATCTTGGAAGCTTTTTCAAAGGTTATTCAAAAACTTA
TTCCTCAACTTCCAACTTTAGAAAATTTATTAGATGTTTTCATTTCTAGATCAAGAATTG
AAAAAGCATTTTTAGTTGATGTTGTTAGTAAAATTTATGTTGCTACTGATAATTCACCAG
TTGATATGCAAACTTATGAATTATGTAGTGATATGATTGATGTAGTTATTGATGTTTCAT
GTATCTATGGTCTTAAAGAAGAAGAGGAAGGTTTAGGTTATGATCAAGAATCACACTCTG
TTATTAAATTAAATAATGGTATGGTTTTATATTTAAAGGAAGTTAACAAATATTTAGCAT
TAGTTTGTTTACTTCGTGAATCAAACTTTGATAAACATGGTTTAATTGATTACAATTTTA
TTTGTTTCAAAAAAGCAATTGAAGAAGTTTTCAGTAGAAAGACAACTAAAGCTGGTGCAA
AGAAAACTATTAAGAAAGCAAACTAAATAAGTTTGACTTTACCTTAATAAAGTTTAGGTA
CACCTTTTAAAAAAAAAAAATAATATAAAATAATAAAAAAATAAAAAAAAAATAAAAAAA
ATAAAAAAAAATAAAAAGAAAATAGTAAAAAAAAAAAAAAAGGGGNACCGCNNCCTNNCN
NG

>SSI596P.Seq
ATTAAAGACATCAAAAAATAAATAAAAAAATAAAACTATAGTAATAACACAAATAAAGCA
CTATACAAAAAAAAAAAACTACATAATATTTAATTGGGTGATTTAATAATAATAAATAAA
AAAAAAAAATAAAAAAGATGGAGGATAATTATGAAGAATATGATAATGCTTTTGTTGGTA
ATTTAGGTGATATGGGTTATGGTGAAGATACACAAGCTGCAGGCGAACCAGCTTCACAAA
TTGAAAATAAACCAAAAATATTTTTAATGGGTTTAAAAAGATCAGGTAAATCATCAATTC
AAAAAGTTGTTTTTCATAAAATGTTACCAAATGAAACTTTATTTTTAGAAAGTACAAGTA
AAGTTGTAAAGAATGATATTTCAAATTCATCATTCGTTCAATTTCAAATTTGGGATTTCC
CAGGTCAATTAGATTTCTTTGATCCATCATTCGATTATGAATACATTCTCAATAATTGTG
GTGCCATTGTTTTCGTCATTGATGCTCAAGATGAAATCATTGAAGCATTACAAAAACTTC
ATCAAACTATTGCTAAAGTTTATCAAATTAACCCAAATATTCACTTTGAAGTATTCATTC
ACAAATCAGATGGTTTATCAGACGATCACAAAATTGATAGACAAAGAGATATTCAACAAA
AAACAACAGAAGAATTAGCAGATGCAAATATTAATGTACATCCAAGTTTCTATGTGAC--
--------TTATGATCATTCAATCTTGGAAGCTTTTTCAAAGGTTATTCAAAAACTTATT
CCTCAACTTCCAACTTTAGAAAATTTATTAGATGTTTTCATTTCTAGATCAAGAATTGAA
AAAGCATTTTTAGTTGATGTTGTTAGTAAAATTTATGTTGCTACTGATAATTCACCAGTT
GATATGCAAACTTATGAATTATGTAGTGATATGATTGATGTAGTTATTGATGTTTCATGT
ATCTATGGTCTTAAAGAAGAAGAGGAAGGTTTAGGTTATGATCAAGAATCACACTCTGTT
ATTAAATTAAATAATGGTATGGTTTTATATTTAAAGGAAGTTAACAAATATTTAGCATTA
GTTTGTTTACTTCGTGAATCAAACTTTGATAAACATGGTTTAATTGATTACAATTTTATT
TGTTTCAAAAAAGCAATTGAAGAAGTTTTCAGTAGAAAGACAACTAAAGCTGGTGCAAAG
AAAACTATTAAGAAAGCAAACTAAATAAGTTTGACTTTACCTTAATAAAGTTTAGGTACA
CCTTTTAAAAAAAAAAAATAATATAAAATAATAAAAAAATAAAAAAAAAATAAAAAAAAT
AAAAAAAAATAAAAAGAAAATAGTAAAAAAAAAAAAAAAGGGGNACCGCNNCCTNNCNNG