>SSI526 (SSI526Q) /CSM/SS/SSI5-B/SSI526Q.Seq.d/
XXXXXXXXXXTTTAAATGATAAAAATATGAAATCACATCTTTTCTTCTCTTTAAATCCAG
ATTCTGCTGATACTGATTCAATTTTATATGAAGATTGGAAAACTGTTAATCAAAAAACAA
TGAATTATTTAAGAAAAATTAATTCTTCACCTTCAAAATTCACTCCAAATGGTAATCAAA
TTTGTCTTGGTCAAGTTTCAACAATTTCAACAATTGGTAGTTCAACTACAACTGCTTCAC
AATCAACAACAACAACAACAACTGGAACAGGTTCAACAACTAGTAAACCAACAACCACTG
GTGGATCAGGTTCATCAACAACTACAACTAAACCATCAACAACAACAACAACAACAACAA
CAACCACTGGTGGATCAAGTACAACTGGATCATCAAATGTTAAAGCAGTTATTAAACAAA
CTATTAGACAAACTTGGTTTGATGGTACAAATACAAATACTTTGGTTGATTGTACATTAA
CCAATCCATCAAGTAGTCCAATTCCTATTCCAAGATTTGCAATTGATAAAACTCCATCAT
CATCTTGGGAATTGAATTTAGTTAGTTCAAATATTGTTTCATTTACAAGTTGGAATAACC
AAATTAGTCCTGGTCAAACTTTATCATTTGGTTATATTGTTTCTAGTAGTACTGTAATTA
CATTTACTCAAATTTAAAAAAAA

---LNDKNMKSHLFFSLNPDSADTDSILYEDWKTVNQKTMNYLRKINSSPSKFTPNGNQI
CLGQVSTISTIGSSTTTASQSTTTTTTGTGSTTSKPTTTGGSGSSTTTTKPSTTTTTTTT
TTGGSSTTGSSNVKAVIKQTIRQTWFDGTNTNTLVDCTLTNPSSSPIPIPRFAIDKTPSS
SWELNLVSSNIVSFTSWNNQISPGQTLSFGYIVSSSTVITFTQI*kk

Frame A:
---LNDKNMKSHLFFSLNPDSADTDSILYEDWKTVNQKTMNYLRKINSSPSKFTPNGNQI
CLGQVSTISTIGSSTTTASQSTTTTTTGTGSTTSKPTTTGGSGSSTTTTKPSTTTTTTTT
TTGGSSTTGSSNVKAVIKQTIRQTWFDGTNTNTLVDCTLTNPSSSPIPIPRFAIDKTPSS
SWELNLVSSNIVSFTSWNNQISPGQTLSFGYIVSSSTVITFTQI*kk


Frame B:
---*miki*nhifssl*iqilliliqfymkigkllikkq*ii*eklilhlqnslqmvikf
vlvkfqqfqqlvvqlqllhnqqqqqqleqvqqlvnqqplvdqvhqqlqlnhqqqqqqqqq
plvdqvqldhqmlkqllnklldklglmvqiqilwlivh*pihqvvqflfqdlqliklhhh
lgn*i*lvqilfhlqvgitklvlvklyhlvilflvvl*lhllkfkk


Frame C:
---k**kyeitsfllfksrfc*y*fnfi*rlenc*sknnelfkkn*fftfkihskw*snl
swssfnnfnnw*fnyncftinnnnnnwnrfnn**tnnhwwirfinnyn*tinnnnnnnnn
hwwikynwiikc*ssy*tny*tnlv*wykykyfg*lyinqsik*snsyskicn**nsiii
lgiefs*fkycfiykle*pn*swsnfiiwlycf**ycnyiysnlkk

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SSM763 (SSM763Q) /CSM/SS/SSM7-C/SSM763Q.Seq.d/                        617   e-175
SSK593 (SSK593Q) /CSM/SS/SSK5-D/SSK593Q.Seq.d/                        617   e-175
SSI526 (SSI526Q) /CSM/SS/SSI5-B/SSI526Q.Seq.d/                        617   e-175
SSI228 (SSI228Q) /CSM/SS/SSI2-B/SSI228Q.Seq.d/                        617   e-175
SSI120 (SSI120Q) /CSM/SS/SSI1-A/SSI120Q.Seq.d/                        617   e-175
SSH762 (SSH762Q) /CSM/SS/SSH7-C/SSH762Q.Seq.d/                        617   e-175
SSG285 (SSG285Q) /CSM/SS/SSG2-D/SSG285Q.Seq.d/                        617   e-175
SSG235 (SSG235Q) /CSM/SS/SSG2-B/SSG235Q.Seq.d/                        617   e-175
SSG191 (SSG191Q) /CSM/SS/SSG1-D/SSG191Q.Seq.d/                        617   e-175
SSF613 (SSF613Q) /CSM/SS/SSF6-A/SSF613Q.Seq.d/                        617   e-175

                                                               Score     E
Sequences producing significant alignments:                    (bits)  Value  N

AC090051|AC090051.8 Homo sapiens 12q BAC RP11-467E3 (Roswell Park Cancer Institute Human BAC Library) complete sequence.    54  0.023  3
BU367499|BU367499.1 603784480F1 CSEQCHN72 Gallus gallus cDNA clone ChEST738o19 5', mRNA sequence.    48  0.14  1
AC143356|AC143356.1 Pan troglodytes chromosome 7 clone RP43-64A13, complete sequence.    38  0.35  4
AC132086|AC132086.2 Mus musculus chromosome UNK clone RP24-556M16, WORKING DRAFT SEQUENCE, 2 unordered pieces.    38  0.52  4
AZ227514|AZ227514.1 RPCI-23-49K4.TJ RPCI-23 Mus musculus genomic clone RPCI-23-49K4, DNA sequence.    34  0.53  2
BX005455|BX005455.4 Zebrafish DNA sequence *** SEQUENCING IN PROGRESS *** from clone CH211-77K19.    36  0.54  6
AF102955|AF102955.1 Pelvetia canaliculata country Isle of Man 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1 and 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence.    46  0.56  1
AF102953|AF102953.1 Pelvetia canaliculata country Norway 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and 26S ribosomal RNA gene, partial sequence.    46  0.56  1
AF102954|AF102954.1 Pelvetia canaliculata country Portugal 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and 26S ribosomal RNA gene, partial sequence.    46  0.56  1
AJ310823|AJ310823.1 Medicago truncatula genomic DNA, Sy4 locus.    34  0.77  3

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC116977_84(AC116977|pid:none) Dictyostelium discoideum chromoso...    50   6e-05
(P14768) RecName: Full=Endo-1,4-beta-xylanase A;          Short=...    43   0.008
CP000511_3449(CP000511|pid:none) Mycobacterium vanbaalenii PYR-1...    41   0.037
(P22698) RecName: Full=Spore germination protein 270-11;  &B3562...    41   0.037
AE008923_609(AE008923|pid:none) Xanthomonas axonopodis pv. citri...    41   0.037
AJ304415_1(AJ304415|pid:none) Xanthomonas campestris pv. campest...    41   0.037
(P19487) RecName: Full=Major extracellular endoglucanase;       ...    41   0.037
CP000656_2982(CP000656|pid:none) Mycobacterium gilvum PYR-GCK, c...    41   0.037
CP000568_2108(CP000568|pid:none) Clostridium thermocellum ATCC 2...    39   0.11
AJ275975_1(AJ275975|pid:none) Clostridium thermocellum celO gene...    39   0.11

 psg: 0.82  gvh: 0.48  alm: 0.43  top: 0.53  tms: 0.00  mit: 0.25  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 36.0 %: cytoplasmic
	 28.0 %: nuclear
	 12.0 %: mitochondrial
	  8.0 %: cytoskeletal
	  4.0 %: vacuolar
	  4.0 %: Golgi
	  4.0 %: vesicles of secretory system
	  4.0 %: endoplasmic reticulum

>> prediction for SSI526 is cyt

>SSI526Z.Seq
----------TTTAAATGATAAAAATATGAAATCACATCTTTTCTTCTCTTTAAATCCAG
ATTCTGCTGATACTGATTCAATTTTATATGAAGATTGGAAAACTGTTAATCAAAAAACAA
TGAATTATTTAAGAAAAATTAATTCTTCACCTTCAAAATTCACTCCAAATGGTAATCAAA
TTTGTCTTGGTCAAGTTTCAACAATTTCAACAATTGGTAGTTCAACTACAACTGCTTCAC
AATCAACAACAACAACAACAACTGGAACAGGTTCAACAACTAGTAAACCAACAACCACTG
GTGGATCAGGTTCATCAACAACTACAACTAAACCATCAACAACAACAACAACAACAACAA
CAACCACTGGTGGATCAAGTACAACTGGATCATCAAATGTTAAAGCAGTTATTAAACAAA
CTATTAGACAAACTTGGTTTGATGGTACAAATACAAATACTTTGGTTGATTGTACATTAA
CCAATCCATCAAGTAGTCCAATTCCTATTCCAAGATTTGCAATTGATAAAACTCCATCAT
CATCTTGGGAATTGAATTTAGTTAGTTCAAATATTGTTTCATTTACAAGTTGGAATAACC
AAATTAGTCCTGGTCAAACTTTATCATTTGGTTATATTGTTTCTAGTAGTACTGTAATTA
CATTTACTCAAATTTAAAAAAAA