>SSI416 (SSI416Q) /CSM/SS/SSI4-A/SSI416Q.Seq.d/
XXXXXXXXXXATTCAAGAATGTTTCAGTATCTTTGATAAAGATAATGACGGTAAGGTCTC
AGTTGAAGATATTGGAGCTTGTTTAAGATCATTAGGTAAAAGCCCAACCATGGCAGATAT
TGAAGCATTAAAGACTGAAATTGGTGCTAAAGAATTTGATATCAATACATTAAAGAGCAT
TTACAAGAAACCAAACATTAAAACTCCACAAGAGCAACAAAAGGAAATGTTAGATGCATT
CAAAGCCCTCGATAAAGAAGGCCATGGTACCATTCAAGGTGCTGAATTACGTCAATTATT
AACCACTCTTGGTGATTACTTATCAACCGCTGAAGTTGATGAATTATTTAAGGAAATCTC
TGTCGATAGTACTACTGGTGCCGTTTCATATGCAAGCTTAGTCAATACCATCGTTTCTGG
TTATCCATTAGGCGGTTTCTAAATTATTATTATATA

---QECFSIFDKDNDGKVSVEDIGACLRSLGKSPTMADIEALKTEIGAKEFDINTLKSIY
KKPNIKTPQEQQKEMLDAFKALDKEGHGTIQGAELRQLLTTLGDYLSTAEVDELFKEISV
DSTTGAVSYASLVNTIVSGYPLGGF*iiii

Frame A:
---fknvsvslikimtvrsqlkilelv*dh*vkaqpwqilkh*rlklvlknlisih*raf
trnqtlklhksnkrkc*mhskpsikkamvpfkvlnyvny*pllvityqplklmnylrksl
sivllvpfhmqa*sipsflvih*avskllly


Frame B:
---srmfqyl**r**r*gls*rywslfkiir*kpnhgry*sikd*nwc*ri*yqyikehl
qetkh*nstratkgnvrciqspr*rrpwyhsrc*itsiinhsw*llinr*s**ii*gnlc
r*yywcrficklsqyhrfwlsirrflnyyyi


Frame C:
---QECFSIFDKDNDGKVSVEDIGACLRSLGKSPTMADIEALKTEIGAKEFDINTLKSIY
KKPNIKTPQEQQKEMLDAFKALDKEGHGTIQGAELRQLLTTLGDYLSTAEVDELFKEISV
DSTTGAVSYASLVNTIVSGYPLGGF*iiii

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

VSD769 (VSD769Q) /CSM/VS/VSD7-C/VSD769Q.Seq.d/                        884   0.0
VSD135 (VSD135Q) /CSM/VS/VSD1-B/VSD135Q.Seq.d/                        884   0.0
VSB729 (VSB729Q) /CSM/VS/VSB7-B/VSB729Q.Seq.d/                        884   0.0
SSM265 (SSM265Q) /CSM/SS/SSM2-C/SSM265Q.Seq.d/                        884   0.0
SSL189 (SSL189Q) /CSM/SS/SSL1-D/SSL189Q.Seq.d/                        884   0.0
SSK774 (SSK774Q) /CSM/SS/SSK7-D/SSK774Q.Seq.d/                        884   0.0
SSJ645 (SSJ645Q) /CSM/SS/SSJ6-B/SSJ645Q.Seq.d/                        884   0.0
SSI416 (SSI416Q) /CSM/SS/SSI4-A/SSI416Q.Seq.d/                        884   0.0
SSF158 (SSF158Q) /CSM/SS/SSF1-C/SSF158Q.Seq.d/                        884   0.0
SSD387 (SSD387Q) /CSM/SS/SSD3-D/SSD387Q.Seq.d/                        884   0.0

                                                               Score     E
Sequences producing significant alignments:                    (bits)  Value  N

X54161|X54161.1 D.discoideum myosin essential light chain gene.   884  0.0  1
M19337|M19337.1 D.discoideum myosin light chain mRNA, complete cds.   825  0.0  1
CA860313|CA860313.1 EST634807 GVSP Glomus versiforme cDNA clone pGVSP19-16, mRNA sequence.    44  1.5  1
AF523316|AF523316.1 Canis familiaris chromosome X clone RP81-291M9 map Xq28 at a position telomeric to the factor VIII gene, *** SEQUENCING IN PROGRESS ***, 8 unordered pieces.    44  1.5  1
C97784|C97784.1 Oryza sativa cDNA, partial sequence (C62862_2A).    32  1.8  2
AC025591|AC025591.8 Staphylococcus aureus clone sabac-134, complete sequence.    40  1.9  5
AL591598|AL591598.8 Mouse DNA sequence from clone RP23-272C14 on chromosome 2.    32  4.6  4
AL050329|AL050329.12 Human DNA sequence from clone RP1-22I17 on chromosome 6q11.1-12.  Contains the 3' end of the gene KIAA0244, the 3' end of the gene for a novel protein with EGF-like and laminin G domains, ESTs, STSs and  GSSs.    40  5.0  2
AC139739|AC139739.2 Felis catus clone RP86-85H18, WORKING DRAFT SEQUENCE, 2 ordered pieces.    42  5.8  1
BM309399|BM309399.1 sak58b07.y1 Gm-c1036 Glycine max cDNA clone SOYBEAN CLONE ID: Gm-c1036-6998 5' similar to TR:Q9ZUJ0 Q9ZUJ0 T2K10.8 PROTEIN. ;, mRNA sequence.    42  5.8  1

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

(P09402) RecName: Full=Myosin, essential light chain; AltName: F...   282   2e-75
A28127(A28127;B48404;A48404;S20728) myosin light chain, nonmuscl...   274   8e-73
A29910(A29910)myosin calcium-binding light chain - slime mold (P...   185   4e-46
(P08053) RecName: Full=Myosin regulatory light chain; AltName: F...   184   8e-46
J03499_1(J03499|pid:none) Physarum polycephalum myosin calcium-b...   184   8e-46
CR382133_531(CR382133|pid:none) Debaryomyces hansenii strain CBS...    99   3e-20
CP000497_44(CP000497|pid:none) Pichia stipitis CBS 6054 chromoso...    99   5e-20
AP007151_395(AP007151|pid:none) Aspergillus oryzae RIB40 genomic...    97   2e-19
AF084426_1(AF084426|pid:none) Synthetic construct calmodulin mut...    97   2e-19
DQ122882_1(DQ122882|pid:none) Chlamydomonas incerta calmodulin m...    97   2e-19

 psg: 0.75  gvh: 0.47  alm: 0.45  top: 0.53  tms: 0.00  mit: 0.20  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 44.0 %: cytoplasmic
	 24.0 %: nuclear
	 12.0 %: cytoskeletal
	  4.0 %: Golgi
	  4.0 %: mitochondrial
	  4.0 %: vacuolar
	  4.0 %: vesicles of secretory system
	  4.0 %: endoplasmic reticulum

>> prediction for SSI416 is cyt

>SSI416Z.Seq
----------ATTCAAGAATGTTTCAGTATCTTTGATAAAGATAATGACGGTAAGGTCTC
AGTTGAAGATATTGGAGCTTGTTTAAGATCATTAGGTAAAAGCCCAACCATGGCAGATAT
TGAAGCATTAAAGACTGAAATTGGTGCTAAAGAATTTGATATCAATACATTAAAGAGCAT
TTACAAGAAACCAAACATTAAAACTCCACAAGAGCAACAAAAGGAAATGTTAGATGCATT
CAAAGCCCTCGATAAAGAAGGCCATGGTACCATTCAAGGTGCTGAATTACGTCAATTATT
AACCACTCTTGGTGATTACTTATCAACCGCTGAAGTTGATGAATTATTTAAGGAAATCTC
TGTCGATAGTACTACTGGTGCCGTTTCATATGCAAGCTTAGTCAATACCATCGTTTCTGG
TTATCCATTAGGCGGTTTCTAAATTATTATTATATA