>SSI381 (SSI381Q) /CSM/SS/SSI3-D/SSI381Q.Seq.d/
XXXXXXXXXXTGAAACAATTTATAATTTATTTAGACTAAGCCAAGGTATACCACAAGGTG
TTAAAGAATATCAATGGGGAAATATAATTCCATTGGAATATAATTTCGATCTTTTAAATG
GTGTCGATTTTCATAAGGGATGTTATTTAGGCCAAGAATTAACCTCAAGAACACATTTCA
CAGGTTTAATTAGAAAGAGAATTTTCCCAGTTGTAATGAGTGTTAAAGATGTTGAAAGTG
CTAGTGTAATGGATGAAGCAATCATCGACCCAACAAAACCACCAAAAGAATCATTACTCT
TCCCAAAACGTATTCTAAATGCATTAAATCTTGAGCATCCACCATCAGACTCTGCATTAA
TTGTTAAAAATATCTCACCAAAACATAATCAACAACAATCATCAGATGAACCTGTTAAAG
TTGGTACTGATAGTGAAATTAAAACAGTTTCAAGATCAACCGATAAATTCATTACCGGTA
TTCATGGTGTTGGTTTGGCAATGTTAAAAGTTGAAAACATTGATATCTTCCAATTAGATA
ATACTGTTGTTCATGATAAATCAAATAAAGAATTAACAGTTTTACCACCTTGTTGGATTA
GTAAATTAACAAGTTTACAAATGACACCACAACAAGTTAGTTAAATTTTATAAAAAAAAA
AAAAAAAAAAAG

---ETIYNLFRLSQGIPQGVKEYQWGNIIPLEYNFDLLNGVDFHKGCYLGQELTSRTHFT
GLIRKRIFPVVMSVKDVESASVMDEAIIDPTKPPKESLLFPKRILNALNLEHPPSDSALI
VKNISPKHNQQQSSDEPVKVGTDSEIKTVSRSTDKFITGIHGVGLAMLKVENIDIFQLDN
TVVHDKSNKELTVLPPCWISKLTSLQMTPQQVS*il*kkkkkk

Frame A:
---ETIYNLFRLSQGIPQGVKEYQWGNIIPLEYNFDLLNGVDFHKGCYLGQELTSRTHFT
GLIRKRIFPVVMSVKDVESASVMDEAIIDPTKPPKESLLFPKRILNALNLEHPPSDSALI
VKNISPKHNQQQSSDEPVKVGTDSEIKTVSRSTDKFITGIHGVGLAMLKVENIDIFQLDN
TVVHDKSNKELTVLPPCWISKLTSLQMTPQQVS*il*kkkkkk


Frame B:
---kqfiiyld*akvyhkvlkningei*fhwniisif*mvsifirdvi*akn*pqehisq
v*lerefsql**vlkmlkvlv*wmkqsstqqnhqknhyssqnvf*mh*ilsihhqtlh*l
lkishqniinnnhqmnllklvlivklkqfqdqpinslpvfmvlvwqc*klktlissn*ii
llfminqikn*qfyhlvglvn*qvyk*hhnklvkfykkkkkkk


Frame C:
---nnl*fi*tkpryttrc*rismgkynsigi*frsfkwcrfs*gmlfrprinlkntfhr
fn*kenfpscnec*rc*kc*cng*snhrpnkttkriitlpktyskciks*astirlcinc
*kyltkt*sttiir*tc*swy***n*nsfkinr*ihyryswcwfgnvks*kh*ylpir*y
ccs**ik*rinsfttlld**inkftndttts*lnfikkkkkk

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SSI381 (SSI381Q) /CSM/SS/SSI3-D/SSI381Q.Seq.d/                       1271   0.0
SFH507 (SFH507Q) /CSM/SF/SFH5-A/SFH507Q.Seq.d/                       1251   0.0
AFI706 (AFI706Q) /CSM/AF/AFI7-A/AFI706Q.Seq.d/                       1221   0.0
VFG690 (VFG690Q) /CSM/VF/VFG6-D/VFG690Q.Seq.d/                       1211   0.0
VFJ156 (VFJ156Q) /CSM/VF/VFJ1-C/VFJ156Q.Seq.d/                       1195   0.0
AFH607 (AFH607Q) /CSM/AF/AFH6-A/AFH607Q.Seq.d/                       1195   0.0
CHF149 (CHF149Q) /CSM/CH/CHF1-C/CHF149Q.Seq.d/                       1162   0.0
AFL347 (AFL347Q) /CSM/AF/AFL3-B/AFL347Q.Seq.d/                       1154   0.0
AFO172 (AFO172Q) /CSM/AF/AFO1-C/AFO172Q.Seq.d/                       1136   0.0
AFK813 (AFK813Q) /CSM/AF/AFK8-A/AFK813Q.Seq.d/                       1126   0.0

                                                               Score     E
Sequences producing significant alignments:                    (bits)  Value  N

AC112489|AC112489.1 Homo sapiens chromosome 3q clone RP11-21I23, WORKING DRAFT SEQUENCE, 19 unordered pieces.    46  0.076  3
AC012450|AC012450.9 Homo sapiens BAC clone RP11-351J7 from 2, complete sequence.    46  0.12  2
AC097847|AC097847.7 Rattus norvegicus clone CH230-95N9, WORKING DRAFT SEQUENCE, 2 unordered pieces.    34  0.25  6
AC114710|AC114710.4 Rattus norvegicus clone CH230-193B23, *** SEQUENCING IN PROGRESS ***, 4 unordered pieces.    46  0.55  1
AQ254531|AQ254531.1 CpG0681B CpIOWAgDNA1 Cryptosporidium parvum genomic, genomic survey sequence.    46  0.55  1
AI822643|0    44  2.2  1
AA720490|AA720490.1 L0-96M13R Ice plant Lambda Uni-Zap XR expression library, 0 hours NaCl treatment Mesembryanthemum crystallinum cDNA clone L0-96 5' similar to translational elongation factor G, mRNA sequence.    44  2.2  1
BH921999|BH921999.1 odi73g11.b1 B.oleracea002 Brassica oleracea genomic, DNA sequence.    44  2.2  1
BZ333831|BZ333831.1 hx74d01.g1 WGS-SbicolorF (JM107 adapted methyl filtered) Sorghum bicolor genomic clone hx74d01 5', DNA sequence.    44  2.2  1
BG537432|BG537432.1 602563434F1 NIH_MGC_77 Homo sapiens cDNA clone IMAGE:4688192 5', mRNA sequence.    44  2.2  1

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

(A2R472) RecName: Full=Putative transferase caf17, mitochondrial...    87   3e-16
(Q5KP91) RecName: Full=Putative transferase CAF17, mitochondrial...    82   1e-14
(Q4WVK5) RecName: Full=Putative transferase caf17, mitochondrial...    82   2e-14
(A1DDV0) RecName: Full=Putative transferase caf17, mitochondrial...    81   2e-14
AX882299_1(AX882299|pid:none) Sequence 17204 from Patent EP10746...    81   3e-14
FN317596_1(FN317596|pid:none) Schistosoma japonicum isolate Anhu...    81   3e-14
(Q5T440) RecName: Full=Putative transferase C1orf69, mitochondri...    81   3e-14
(Q7RYZ1) RecName: Full=Putative transferase caf-17, mitochondria...    80   4e-14
(Q6C8Y7) RecName: Full=Putative transferase CAF17, mitochondrial...    79   2e-13
(Q0UE25) RecName: Full=Putative transferase CAF17, mitochondrial...    77   3e-13

 psg: 0.76  gvh: 0.38  alm: 0.43  top: 0.53  tms: 0.00  mit: 0.25  mip: 0.03
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 52.0 %: cytoplasmic
	 32.0 %: nuclear
	  8.0 %: mitochondrial
	  4.0 %: cytoskeletal
	  4.0 %: vesicles of secretory system

>> prediction for SSI381 is cyt

>SSI381Z.Seq
----------TGAAACAATTTATAATTTATTTAGACTAAGCCAAGGTATACCACAAGGTG
TTAAAGAATATCAATGGGGAAATATAATTCCATTGGAATATAATTTCGATCTTTTAAATG
GTGTCGATTTTCATAAGGGATGTTATTTAGGCCAAGAATTAACCTCAAGAACACATTTCA
CAGGTTTAATTAGAAAGAGAATTTTCCCAGTTGTAATGAGTGTTAAAGATGTTGAAAGTG
CTAGTGTAATGGATGAAGCAATCATCGACCCAACAAAACCACCAAAAGAATCATTACTCT
TCCCAAAACGTATTCTAAATGCATTAAATCTTGAGCATCCACCATCAGACTCTGCATTAA
TTGTTAAAAATATCTCACCAAAACATAATCAACAACAATCATCAGATGAACCTGTTAAAG
TTGGTACTGATAGTGAAATTAAAACAGTTTCAAGATCAACCGATAAATTCATTACCGGTA
TTCATGGTGTTGGTTTGGCAATGTTAAAAGTTGAAAACATTGATATCTTCCAATTAGATA
ATACTGTTGTTCATGATAAATCAAATAAAGAATTAACAGTTTTACCACCTTGTTGGATTA
GTAAATTAACAAGTTTACAAATGACACCACAACAAGTTAGTTAAATTTTATAAAAAAAAA
AAAAAAAAAAAG