>SSI224 (SSI224Q) /CSM/SS/SSI2-A/SSI224Q.Seq.d/
XXXXXXXXXXGGCCCACTCTTGGCCGATTTAACCCGTCAAATCTCAAAAGACTACGGTGT
TTACATTGAAGAAGGTGGTCACGCCATTAGAGGTGGCATTCTCATCGACAAAGAAGGTCT
TGTTAGAGTCATTGCAATGAACCATAATCCAGTTNGCCGTAGTGTAGATGAAGCAATCCG
TACTTTGAAAGCCTTGAAGTTTACAGATCAATTCGGCGAGGTATGTCCAGCCAATTGGTC
AGAGGGCGATAAATCAATTAAAGCAGATCCAAAAGGTTCAAAAGAATACTTTGAAGCTGT
TAATAAATAAATGGTTCAATCCTTTTTTGTAATTCTCTCATCAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAA

---PLLADLTRQISKDYGVYIEEGGHAIRGGILIDKEGLVRVIAMNHNPVXRSVDEAIRT
LKALKFTDQFGEVCPANWSEGDKSIKADPKGSKEYFEAVNK*mvqsffvilsskkkkkkk
kkk

Frame A:
---ahswpi*pvksqkttvftlkkvvtplevafsstkkvlleslq*tiiqxavv*mkqsv
l*kp*slqinsaryvqpigqrainqlkqiqkvqkntlkllinkwfnpfl*fshqkkkkkk
kkkk


Frame B:
---ptlgrfnpsnlkrlrclh*rrwsrh*rwhshrqrrsc*shcnep*ssxp*cr*snpy
feslevyrsirrgmssqlvrgr*in*srskrfkril*sc**ingsilfcnslikkkkkkk
kkk


Frame C:
---PLLADLTRQISKDYGVYIEEGGHAIRGGILIDKEGLVRVIAMNHNPVXRSVDEAIRT
LKALKFTDQFGEVCPANWSEGDKSIKADPKGSKEYFEAVNK*mvqsffvilsskkkkkkk
kkk

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SSI224 (SSI224Q) /CSM/SS/SSI2-A/SSI224Q.Seq.d/                        652   0.0
VSC693 (VSC693Q) /CSM/VS/VSC6-D/VSC693Q.Seq.d/                        577   e-164
VSB232 (VSB232Q) /CSM/VS/VSB2-B/VSB232Q.Seq.d/                        577   e-164
VSA742 (VSA742Q) /CSM/VS/VSA7-B/VSA742Q.Seq.d/                        577   e-164
SSC729 (SSC729Q) /CSM/SS/SSC7-B/SSC729Q.Seq.d/                        577   e-164
FC-BK24 (FC-BK24Q) /CSM/FC/FC-BK/FC-BK24Q.Seq.d/                      577   e-164
VSB736 (VSB736Q) /CSM/VS/VSB7-B/VSB736Q.Seq.d/                        573   e-163
VSA873 (VSA873Q) /CSM/VS/VSA8-D/VSA873Q.Seq.d/                        573   e-163
SSM818 (SSM818Q) /CSM/SS/SSM8-A/SSM818Q.Seq.d/                        573   e-163
VSC423 (VSC423Q) /CSM/VS/VSC4-A/VSC423Q.Seq.d/                        567   e-161

                                                               Score     E
Sequences producing significant alignments:                    (bits)  Value  N

AC117070|AC117070.2 Dictyostelium discoideum chromosome 2 map 2097701-2233941 strain AX4, complete sequence.   577  e-161  1
AC123513|AC123513.1 Dictyostelium discoideum chromosome 2 map 2779865-2840915 strain AX4, *** SEQUENCING IN PROGRESS ***, in ordered pieces.   577  e-161  1
BQ991584|BQ991584.1 QGF23E07.yg.ab1 QG_EFGHJ lettuce serriola Lactuca sativa cDNA clone QGF23E07, mRNA sequence.    42  4.7  1
AL121587|AL121587.19 Human DNA sequence from clone RP3-495O3 on chromosome 20 Contains  part of the gene for a novel HMG (high mobility group) box protein  similar to KIAA0808, STSs and GSSs.    42  4.7  1
BQ998847|BQ998847.1 QGG20G16.yg.ab1 QG_EFGHJ lettuce serriola Lactuca sativa cDNA clone QGG20G16, mRNA sequence.    42  4.7  1
BU008450|BU008450.1 QGH7K03.yg.ab1 QG_EFGHJ lettuce serriola Lactuca sativa cDNA clone QGH7K03, mRNA sequence.    42  4.7  1
AA296416|AA296416.1 EST10903 Umbilical vein endothelial cells II Homo sapiens cDNA 5' end, mRNA sequence.    42  4.7  1
AA296176|AA296176.1 EST10648 Umbilical vein endothelial cells II Homo sapiens cDNA 5' end, mRNA sequence.    42  4.7  1
AC094722|AC094722.4 Rattus norvegicus clone CH230-5K1, WORKING DRAFT SEQUENCE, 5 unordered pieces.    38  5.9  4
AL607005|AL607005.3 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0118P14.    44  7.3  3

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC117070_11(AC117070|pid:none) Dictyostelium discoideum chromoso...   182   4e-45
AY383653_1(AY383653|pid:none) Taiwanofungus camphoratus peroxire...   124   1e-27
AY787751_1(AY787751|pid:none) Phanerochaete chrysosporium peroxi...   123   2e-27
FM992690_578(FM992690|pid:none) Candida dubliniensis CD36 chromo...   119   4e-26
DQ893599_1(DQ893599|pid:none) Synthetic construct clone IMAGE:10...   118   5e-26
DQ813344_1(DQ813344|pid:none) Moniliophthora perniciosa cys 2 pe...   118   5e-26
(Q9Y7F0) RecName: Full=Peroxiredoxin TSA1;          EC=1.11.1.15...   118   5e-26
BT049855_1(BT049855|pid:none) Salmo salar clone ssal-rgb2-535-35...   118   5e-26
(Q13162) RecName: Full=Peroxiredoxin-4;          EC=1.11.1.15; A...   118   7e-26
FJ013222_1(FJ013222|pid:none) Seriola lalandi 2-Cys peroxiredoxi...   117   9e-26

 psg: 0.59  gvh: 0.29  alm: 0.47  top: 0.53  tms: 0.00  mit: 0.29  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 36.0 %: cytoplasmic
	 32.0 %: nuclear
	 16.0 %: mitochondrial
	  8.0 %: cytoskeletal
	  4.0 %: vacuolar
	  4.0 %: vesicles of secretory system

>> prediction for SSI224 is cyt

>SSI224Z.Seq
----------GGCCCACTCTTGGCCGATTTAACCCGTCAAATCTCAAAAGACTACGGTGT
TTACATTGAAGAAGGTGGTCACGCCATTAGAGGTGGCATTCTCATCGACAAAGAAGGTCT
TGTTAGAGTCATTGCAATGAACCATAATCCAGTTNGCCGTAGTGTAGATGAAGCAATCCG
TACTTTGAAAGCCTTGAAGTTTACAGATCAATTCGGCGAGGTATGTCCAGCCAATTGGTC
AGAGGGCGATAAATCAATTAAAGCAGATCCAAAAGGTTCAAAAGAATACTTTGAAGCTGT
TAATAAATAAATGGTTCAATCCTTTTTTGTAATTCTCTCATCAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAA