>SSI212 (SSI212Q) /CSM/SS/SSI2-A/SSI212Q.Seq.d/
TTGTTAGAAAATATTCAAATTCAAAAATGGATTGTGCAATTACAAAAGATGTAGAGGATA
TGTTAAGAAAATTTGATTCAAATGGTGATGGTAATATTACATTTGATGAAGCTGTAAAAC
GTTTGAAGGAAACCGGTTCAAAAGATCCATTACGTGCTGCCTCTTCAATGTTTATTTCTC
TTGATAAGGATAAGGATGGAATTATTTCAATAAAAGAGATTCATGGCCATAAGGCTGATG
TTGCTGCAAAGAAATTGCAAAAGGCAATTAACAACATCTGTAACAACTTCTTGAAAGGCT
ATGACACTGATAAGGATGGAAGGATCTCATGGGATGAAGTATGCAATTGGGTAAATAAAA
ACAATCCAGATGCAATTGCTCCACTTATGATTGTTGAAAATTTCTTTAGTGAATTGGATA
AAGATAATGACAGATTCGTAACCAAGTGTGAACTTCAGGAGTACGTTACTAAATACAAAA
GTCTCCCAGAACAATAAATAATTTATTGTTCAAATTCAATAATTATTAATCAACATTTAT
AATTTTCATTTTTAAAAAAATTTAAATAAATAAATAAATAAAAAATAATCTTTTAAAAAT
AATTTTAA

VRKYSNSKMDCAITKDVEDMLRKFDSNGDGNITFDEAVKRLKETGSKDPLRAASSMFISL
DKDKDGIISIKEIHGHKADVAAKKLQKAINNICNNFLKGYDTDKDGRISWDEVCNWVNKN
NPDAIAPLMIVENFFSELDKDNDRFVTKCELQEYVTKYKSLPEQ*iiycsnsiiinqhl*
fsflkkfk*ink*kiif*k*f*

Frame A:
lleniqiqkwivqlqkm*ric*enliqmvmvilhlmkl*nv*rkpvqkihyvlplqclfl
lirirmelfq*krfmairlmllqrnckrqlttsvtts*kamtlirmegshgmkyaig*ik
tiqmqllhl*llkislvnwikimtds*psvnfrstllntkvsqnnk*fivqiq*lliniy
nfhf*knlnk*inkk*sfknnf


Frame B:
c*kifkfknglcnykrcrgyvkki*fkw*w*yyi**scktfegnrfkrsitcclfnvyfs
**g*gwnyfnkrdswp*g*ccckeiakgn*qhl*qllerl*h**gwkdlmg*smqlgk*k
qsrcncstydc*kfl**ig*r**qirnqv*tsgvry*iqksprtinnllfkfnny*stfi
ififkki*ink*iknnllkiil


Frame C:
VRKYSNSKMDCAITKDVEDMLRKFDSNGDGNITFDEAVKRLKETGSKDPLRAASSMFISL
DKDKDGIISIKEIHGHKADVAAKKLQKAINNICNNFLKGYDTDKDGRISWDEVCNWVNKN
NPDAIAPLMIVENFFSELDKDNDRFVTKCELQEYVTKYKSLPEQ*iiycsnsiiinqhl*
fsflkkfk*ink*kiif*k*f*

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SSI212 (SSI212Q) /CSM/SS/SSI2-A/SSI212Q.Seq.d/                       1015   0.0
SSM408 (SSM408Q) /CSM/SS/SSM4-A/SSM408Q.Seq.d/                        999   0.0
SSM294 (SSM294Q) /CSM/SS/SSM2-D/SSM294Q.Seq.d/                        999   0.0
SSL192 (SSL192Q) /CSM/SS/SSL1-D/SSL192Q.Seq.d/                        999   0.0
SSL187 (SSL187Q) /CSM/SS/SSL1-D/SSL187Q.Seq.d/                        999   0.0
SSK751 (SSK751Q) /CSM/SS/SSK7-C/SSK751Q.Seq.d/                        999   0.0
SSK729 (SSK729Q) /CSM/SS/SSK7-B/SSK729Q.Seq.d/                        999   0.0
SSH153 (SSH153Q) /CSM/SS/SSH1-C/SSH153Q.Seq.d/                        999   0.0
SSG852 (SSG852Q) /CSM/SS/SSG8-C/SSG852Q.Seq.d/                        999   0.0
SSG624 (SSG624Q) /CSM/SS/SSG6-A/SSG624Q.Seq.d/                        999   0.0

                                                               Score     E
Sequences producing significant alignments:                    (bits)  Value  N

X82784|X82784.1 D.discoideum mRNA for calcium binding protein.   975  0.0  1
AC116987|AC116987.2 Dictyostelium discoideum chromosome 2 map 3527441-3568052 strain AX4, complete sequence.   910  0.0  2
BQ875038|BQ875038.1 QGI6P19.yg.ab1 QG_ABCDI lettuce salinas Lactuca sativa cDNA clone QGI6P19, mRNA sequence.    42  0.029  2
AC097596|AC097596.7 Rattus norvegicus clone CH230-34H14, WORKING DRAFT SEQUENCE, 2 unordered pieces.    46  0.50  1
AC139135|AC139135.5 Mus musculus chromosome 9, clone RP24-360E17, complete sequence.    46  0.50  1
AC096569|AC096569.1 Homo sapiens chromosome 2 clone RP11-347B16, complete sequence.    38  1.1  2
AC114604|AC114604.3 Mus musculus clone RP23-367L9, WORKING DRAFT SEQUENCE, 5 ordered pieces.    46  1.3  2
BH898487|BH898487.1 MB61p8A12 Mission Bay (San Diego, CA) uncultured virus community uncultured marine virus genomic clone MB61p8A12, DNA sequence.    44  2.0  1
AC110201|AC110201.3 Mus musculus clone RP23-214G22, WORKING DRAFT SEQUENCE, 12 unordered pieces.    44  2.0  1
AL929113|AL929113.9 Mouse DNA sequence from clone RP23-424D23 on chromosome 2.    44  2.0  1

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

(P54653) RecName: Full=Calcium-binding protein 2;  &S62881(S6288...    79   8e-14
(Q966Q9) RecName: Full=Calcium-binding protein H; AltName: Full=...    69   8e-11
(Q869S9) RecName: Full=Calcium-binding protein E; AltName: Full=...    69   1e-10
AB070447_1(AB070447|pid:none) Dictyostelium discoideum cbpE mRNA...    69   1e-10
AJ297597_1(AJ297597|pid:none) Dictyostelium discoideum mRNA for ...    67   3e-10
(Q54RF4) RecName: Full=Calcium-binding protein 4a;                     67   3e-10
(P09485) RecName: Full=Calcium-binding protein LPS1-alpha;             57   4e-07
CR940353_624(CR940353|pid:none) Theileria annulata strain Ankara...    56   9e-07
EF523472_1(EF523472|pid:none) Synthetic construct putative aller...    55   2e-06
FN357341_31(FN357341|pid:none) Schistosoma mansoni genome sequen...    55   2e-06

 psg: 0.59  gvh: 0.27  alm: 0.47  top: 0.53  tms: 0.00  mit: 0.30  mip: 0.02
 nuc: 0.00  erl: 0.00  erm: 0.20  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 32.0 %: cytoplasmic
	 32.0 %: nuclear
	 16.0 %: mitochondrial
	 12.0 %: cytoskeletal
	  4.0 %: extracellular, including cell wall
	  4.0 %: peroxisomal

>> prediction for SSI212 is cyt

>SSI212E.Seq
TTGTTAGAAAATATTCAAATTCAAAAATGGATTGTGCAATTACAAAAGATGTAGAGGATA
TGTTAAGAAAATTTGATTCAAATGGTGATGGTAATATTACATTTGATGAAGCTGTAAAAC
GTTTGAAGGAAACCGGTTCAAAAGATCCATTACGTGCTGCCTCTTCAATGTTTATTTCTC
TTGATAAGGATAAGGATGGAATTATTTCAATAAAAGAGATTCATGGCCATAAGGCTGATG
TTGCTGCAAAGAAATTGCAAAAGGCAATTAACAACATCTGTAACAACTTCTTGAAAGGCT
ATGACACTGATAAGGATGGAAGGATCTCATGGGATGAAGTATGCAATTGGGTAAATAAAA
ACAATCCAGATGCAATTGCTCCACTTATGATTGTTGAAAATTTCTTTAGTGAATTGGATA
AAGATAATGACAGATTCGTAACCAAGTGTGAACTTCAGGAGTACGTTACTAAATACAAAA
GTCTCCCAGAACAATAAATAATTTATTGTTCAAATTCAATAATTATTAATCAACATTTAT
AATTTTCATTTTTAAAAAAATTTAAATAAATAAATAAATAAAAAATAATCTTTTAAAAAT
AATTTTAA