>SSH817 (SSH817Q) /CSM/SS/SSH8-A/SSH817Q.Seq.d/
AGAATATGGAAGGAATATTATGTGCAAGTCCAGGATGTGGTAAACCAGCCAAACTTCAAT
GTCCAACATGTGTAAATCTCAAACTTGAAACACCATCACATTTTTGTTCACAAGAATGTT
TTAAAACATTTTGGCCACTTCATAAAATGTATCATCAAAAAGGACAACCAGAAAATTTAC
CATCACAATTTAGAAATTATAAATTCACAGGTCCACTTAGACCAACTAATATTACACCAA
TGAGAXXXXXXXXXXCGCCATAGCCGAACGAGCAGCTCAGAGCGTTTTGATATCATGCTG
CTAATCGCCCTGATGCTTCAACTAACATGTTGGCTTGCGGGCGTTCATGCTCAGAAACAA
GGTTGGGACAAGCACTTCCAGGCTAACACAGTCAGAAATCGAAACGTACTCTCAACAGTT
CGCTTAGGCATGGAAGTTTTGCGGCATTCTGGCTACACAATAACAAGGGAAGACTTACTC
GTGGCTGCAACCCTACTAGCTCAAAATTTATTCACACATGGTTACGCTTTGGGGAAATTA
TGAGGGGATCTCTCAGTGCTCAACAGTTACTTCAACCATACCATGCTGATATCACAGTAC
TTAATAAAAAAAATTTTAACCGTGAAAATATCCTTGACAGATCTCATCCATTATCTGGTA
GTCATGTTATTGATTAATATTCACTCAATTGATTTTAATTTTTTTAAAATTATCATCTAT
ACATTTTATATAAATATAAATATAAAATAAAACATAAATTATAACTATTAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAGGGCGGCGGCCCACTGC

NMEGILCASPGCGKPAKLQCPTCVNLKLETPSHFCSQECFKTFWPLHKMYHQKGQPENLP
SQFRNYKFTGPLRPTNITPMR---

---RHSRTSSSERFDIMLLIALMLQLTCWLAGVHAQKQGWDKHFQANTVRNRNVLSTVRL
GMEVLRHSGYTITREDLLVAATLLAQNLFTHGYALGKL*gdlsvlnsyfnhtmlisqyli
kkiltvkisltdlihylvvmllinihsidfnffkiiiytfyininik*ninyny*kkkkk
kkkkgrrpt

Frame A:
riwkeyyvqvqdvvnqpnfnvqhv*isnlkhhhifvhknvlkhfghfikciikkdnqkiy
hhnleiinsqvhldqlilhq*---

---RHSRTSSSERFDIMLLIALMLQLTCWLAGVHAQKQGWDKHFQANTVRNRNVLSTVRL
GMEVLRHSGYTITREDLLVAATLLAQNLFTHGYALGKL*gdlsvlnsyfnhtmlisqyli
kkiltvkisltdlihylvvmllinihsidfnffkiiiytfyininik*ninyny*kkkkk
kkkkgrrpt

Frame B:
eygrnimcksrmw*tsqtsmsnmcksqt*ntitflftrmf*nilats*nvsskrttrkft
iti*kl*ihrst*tn*yytne---

---aiaeraaqsvliscc*sp*cfn*hvglrafmlrnkvgtstsrltqseietysqqfa*
awkfcgilatq*qgktyswlqpy*lkiyshmvtlwgnyegisqcstvtstipc*yhst**
kkf*p*kyp*qissiiw*scy*liftqliliflklssihfi*i*i*nkt*iitikkkkkk
kkkkgggpl

Frame C:
NMEGILCASPGCGKPAKLQCPTCVNLKLETPSHFCSQECFKTFWPLHKMYHQKGQPENLP
SQFRNYKFTGPLRPTNITPMR---

---p*pneqlraf*yhaanrpdastnmlacgrscsetrlgqalpg*hsqkskrtlnsslr
hgsfaafwlhnnkgrltrgcnptsskfihtwlrfgeimrgslsaqqllqpyhaditvlnk
knfnrenildrshplsgshvid*ysln*f*ff*nyhlyilykykykikhkl*llkkkkkk
kkkraaahc

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SSH817 (SSH817Q) /CSM/SS/SSH8-A/SSH817Q.Seq.d/                       1277   0.0
VSI529 (VSI529Q) /CSM/VS/VSI5-B/VSI529Q.Seq.d/                        817   0.0
VSJ532 (VSJ532Q) /CSM/VS/VSJ5-B/VSJ532Q.Seq.d/                        805   0.0
SSK522 (SSK522Q) /CSM/SS/SSK5-A/SSK522Q.Seq.d/                        599   e-170
SSG213 (SSG213Q) /CSM/SS/SSG2-A/SSG213Q.Seq.d/                        549   e-155
VSI374 (VSI374Q) /CSM/VS/VSI3-D/VSI374Q.Seq.d/                        486   e-136
VFN267 (VFN267Q) /CSM/VF/VFN2-C/VFN267Q.Seq.d/                        486   e-136
VFL763 (VFL763Q) /CSM/VF/VFL7-C/VFL763Q.Seq.d/                        486   e-136
VFL558 (VFL558Q) /CSM/VF/VFL5-C/VFL558Q.Seq.d/                        486   e-136
VFI628 (VFI628Q) /CSM/VF/VFI6-B/VFI628Q.Seq.d/                        486   e-136

                                                               Score     E
Sequences producing significant alignments:                    (bits)  Value  N

BZ148828|BZ148828.1 CH230-395K7.TJ CHORI-230 Segment 2 Rattus norvegicus genomic clone CH230-395K7, DNA sequence.   613  e-171  1
S67119|S67119.1 BST=somatotropin...BST/beta-Gal fusion protein [Escherichia coli, LBB84, plasmid pXT107, IS10L/R-1, PlasmidTransposonInsertionMutant, 3 genes, 1679 nt].   609  e-170  1
BE130189|BE130189.1 L48-312T3 Ice plant Lambda Uni-Zap XR expression library, 48 hours NaCl treatment Mesembryanthemum crystallinum cDNA clone L48-312 5', mRNA sequence.   607  e-170  1
AP005577|AP005577.1 Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1655_B12, WORKING DRAFT SEQUENCE, 1 ordered pieces.   607  e-170  1
AJ508060|AJ508060.1 Citrobacter freundii fimbrial operon.        607  e-170  1
AP001846|AP001846.2 Homo sapiens genomic DNA, chromosome 18q22 clone:RP11-796C24, WORKING DRAFT SEQUENCE, 56 unordered pieces.   605  e-169  1
BD157365|BD157365.1 Primer for synthesizing full-length cDNA and use thereof.   605  e-169  1
BD012283|BD012283.1 Genes related to stomach cancer.             605  e-169  1
AK027321|AK027321.1 Homo sapiens cDNA FLJ14415 fis, clone HEMBA1004889, weakly similar to Human C3f mRNA.   605  e-169  1
AC009873|AC009873.2 Homo sapiens chromosome 15 clone RP11-126J9 map 15, WORKING DRAFT SEQUENCE, 85 unordered pieces.   605  e-169  1

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC149135_16(AC149135|pid:none) Medicago truncatula chromosome 2 ...   173   7e-42
AC068901_7(AC068901|pid:none) Arabidopsis thaliana chromosome 1 ...   173   7e-42
AJ851089_77(AJ851089|pid:none) Uncultured bacterium pRSB107 plas...   173   7e-42
CU928144_37(CU928144|pid:none) Escherichia fergusonii str. ATCC ...   173   7e-42
AF307748_1(AF307748|pid:none) Tn10 delivery vector pHV1249 trans...   173   7e-42
EF120459_1(EF120459|pid:none) Enterobacteria phage CL707 IS10 tr...   172   1e-41
AE005674_1692(AE005674|pid:none) Shigella flexneri 2a str. 301, ...   167   3e-40
AE005674_485(AE005674|pid:none) Shigella flexneri 2a str. 301, c...   167   3e-40
AB366440_79(AB366440|pid:none) Salmonella enterica subsp. enteri...   167   3e-40
AF386526_83(AF386526|pid:none) Shigella flexneri 2a str. 301 vir...   167   3e-40

 psg: 0.75  gvh: 0.44  alm: 0.27  top: 0.50  tms: 0.07  mit: 0.12  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.20  pox: 0.30  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 1.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 1.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 0.00 

	 28.0 %: endoplasmic reticulum
	 20.0 %: cytoplasmic
	 16.0 %: mitochondrial
	 16.0 %: nuclear
	  8.0 %: Golgi
	  8.0 %: plasma membrane
	  4.0 %: vesicles of secretory system

>> prediction for SSH817 is end

>SSH817F.Seq
AGAATATGGAAGGAATATTATGTGCAAGTCCAGGATGTGGTAAACCAGCCAAACTTCAAT
GTCCAACATGTGTAAATCTCAAACTTGAAACACCATCACATTTTTGTTCACAAGAATGTT
TTAAAACATTTTGGCCACTTCATAAAATGTATCATCAAAAAGGACAACCAGAAAATTTAC
CATCACAATTTAGAAATTATAAATTCACAGGTCCACTTAGACCAACTAATATTACACCAA
TGAGA----------

>SSH817Z.Seq
----------CGCCATAGCCGAACGAGCAGCTCAGAGCGTTTTGATATCATGCTGCTAAT
CGCCCTGATGCTTCAACTAACATGTTGGCTTGCGGGCGTTCATGCTCAGAAACAAGGTTG
GGACAAGCACTTCCAGGCTAACACAGTCAGAAATCGAAACGTACTCTCAACAGTTCGCTT
AGGCATGGAAGTTTTGCGGCATTCTGGCTACACAATAACAAGGGAAGACTTACTCGTGGC
TGCAACCCTACTAGCTCAAAATTTATTCACACATGGTTACGCTTTGGGGAAATTATGAGG
GGATCTCTCAGTGCTCAACAGTTACTTCAACCATACCATGCTGATATCACAGTACTTAAT
AAAAAAAATTTTAACCGTGAAAATATCCTTGACAGATCTCATCCATTATCTGGTAGTCAT
GTTATTGATTAATATTCACTCAATTGATTTTAATTTTTTTAAAATTATCATCTATACATT
TTATATAAATATAAATATAAAATAAAACATAAATTATAACTATTAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAGGGCGGCGGCCCACTGC

>SSH817P.Seq
AGAATATGGAAGGAATATTATGTGCAAGTCCAGGATGTGGTAAACCAGCCAAACTTCAAT
GTCCAACATGTGTAAATCTCAAACTTGAAACACCATCACATTTTTGTTCACAAGAATGTT
TTAAAACATTTTGGCCACTTCATAAAATGTATCATCAAAAAGGACAACCAGAAAATTTAC
CATCACAATTTAGAAATTATAAATTCACAGGTCCACTTAGACCAACTAATATTACACCAA
TGAGA----------CGCCATAGCCGAACGAGCAGCTCAGAGCGTTTTGATATCATGCTG
CTAATCGCCCTGATGCTTCAACTAACATGTTGGCTTGCGGGCGTTCATGCTCAGAAACAA
GGTTGGGACAAGCACTTCCAGGCTAACACAGTCAGAAATCGAAACGTACTCTCAACAGTT
CGCTTAGGCATGGAAGTTTTGCGGCATTCTGGCTACACAATAACAAGGGAAGACTTACTC
GTGGCTGCAACCCTACTAGCTCAAAATTTATTCACACATGGTTACGCTTTGGGGAAATTA
TGAGGGGATCTCTCAGTGCTCAACAGTTACTTCAACCATACCATGCTGATATCACAGTAC
TTAATAAAAAAAATTTTAACCGTGAAAATATCCTTGACAGATCTCATCCATTATCTGGTA
GTCATGTTATTGATTAATATTCACTCAATTGATTTTAATTTTTTTAAAATTATCATCTAT
ACATTTTATATAAATATAAATATAAAATAAAACATAAATTATAACTATTAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAGGGCGGCGGCCCACTGC