>SSH378 (SSH378Q) /CSM/SS/SSH3-D/SSH378Q.Seq.d/
XXXXXXXXXXCAGATTTTGGTCTTAGTAAAATATTTGGAACTTGGTGAAGCATTGGAAAC
AAGTTGTGGTACACCAGATTATGTTGCACCAGAAGTTTTAACTGGTGGTTCATATGATAA
TGCAGTCGATATGTGGTCAATTGGTGTCATTACCTATATTTTATTATGTGGTTTCCCACC
ATTCTATGCTTCATCTCAAAACTTATTATTTGAAAAAATTTTAACCGCTGATTATGATTT
CCCAGAACCAGAATGGACTCATGTCTCTGAACATGCCAAAGCTTTCATTAGAAACTTAAT
TGTCAAAGATCCAGATCAACGTCATACTGCCAAACAATGTCTTGATGACCTTTGGCTCTC
TGGTAGTGATCAATCAATTGGTTCTGCTGCTGATCTCCACTCTCATTTCGCTGAAAAGAT
GAAGAAATATAATGACCAAAGAAGAGGTGGTCAATCTTCAAATAATTAAATTTAATAATA
ATAATAATAA

---ILVLVKYLELGEALETSCGTPDYVAPEVLTGGSYDNAVDMWSIGVITYILLCGFPPF
YASSQNLLFEKILTADYDFPEPEWTHVSEHAKAFIRNLIVKDPDQRHTAKQCLDDLWLSG
SDQSIGSAADLHSHFAEKMKKYNDQRRGGQSSNN*i******

Frame A:
---rfws**niwnlvkhwkqvvvhqimlhqkf*lvvhmimqsicgqlvslpifyyvvshh
smlhlktyylkkf*plimisqnqnglmslnmpklslet*lskiqinvilpnnvlmtfgsl
vvinqlvlllistlislkr*rnimtkeevvnlqiikfnnnnn


Frame B:
---dfglskifgtw*signklwytrlcctrsfnwwfi**csryvvnwchylyfimwfpti
lcfisklii*knfnr*l*fprtrmdscl*tcqsfh*klncqrsrstsycqtms**plalw
**sinwfcc*splsfr*kdeei**pkkrwsifk*lnliiiii


Frame C:
---ILVLVKYLELGEALETSCGTPDYVAPEVLTGGSYDNAVDMWSIGVITYILLCGFPPF
YASSQNLLFEKILTADYDFPEPEWTHVSEHAKAFIRNLIVKDPDQRHTAKQCLDDLWLSG
SDQSIGSAADLHSHFAEKMKKYNDQRRGGQSSNN*i******

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SSH378 (SSH378Q) /CSM/SS/SSH3-D/SSH378Q.Seq.d/                        892   0.0
SSJ513 (SSJ513Q) /CSM/SS/SSJ5-A/SSJ513Q.Seq.d/                        876   0.0
SSI101 (SSI101Q) /CSM/SS/SSI1-A/SSI101Q.Seq.d/                        876   0.0
SLD285 (SLD285Q) /CSM/SL/SLD2-D/SLD285Q.Seq.d/                        876   0.0
SLC252 (SLC252Q) /CSM/SL/SLC2-C/SLC252Q.Seq.d/                        876   0.0
SSA402 (SSA402Q) /CSM/SS/SSA4-A/SSA402Q.Seq.d/                        874   0.0
SSC643 (SSC643Q) /CSM/SS/SSC6-B/SSC643Q.Seq.d/                        868   0.0
SLI715 (SLI715Q) /CSM/SL/SLI7-A/SLI715Q.Seq.d/                        846   0.0
SSJ377 (SSJ377Q) /CSM/SS/SSJ3-D/SSJ377Q.Seq.d/                        844   0.0
VFG381 (VFG381Q) /CSM/VF/VFG3-D/VFG381Q.Seq.d/                        829   0.0

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

AC116305|AC116305.2 Dictyostelium discoideum chromosome 2 map 1005175-1418323 strain AX4, complete sequence.   829   0.0    2
M64176|M64176.1 D.discoideum myosin light chain kinase (MLCK) mRNA, complete cds.    84   7e-26  3
AZ545332|AZ545332.1 ENTGA35TF Entamoeba histolytica Sheared DNA Entamoeba histolytica genomic, DNA sequence.    52   6e-11  3
AB118103|AB118103.1 Entamoeba histolytica gene for hypothetical protein, complete cds, clone:Eh-2109.    52   7e-11  3
AZ667950|AZ667950.1 ENTFN88TR Entamoeba histolytica Sheared DNA Entamoeba histolytica genomic, DNA sequence.    52   2e-10  2
AC116982|AC116982.2 Dictyostelium discoideum chromosome 2 map 3622643-3879522 strain AX4, complete sequence.    50   4e-06  6
BH146759|BH146759.1 ENTPS59TR Entamoeba histolytica Sheared DNA Entamoeba histolytica genomic, DNA sequence.    48   3e-05  2
BH164301|BH164301.1 ENTSK07TR Entamoeba histolytica Sheared DNA Entamoeba histolytica genomic, DNA sequence.    48   3e-05  2
AZ693041|AZ693041.1 ENTJJ36TR Entamoeba histolytica Sheared DNA Entamoeba histolytica genomic, DNA sequence.    48   3e-05  2
AZ676962|AZ676962.1 ENTJV60TR Entamoeba histolytica Sheared DNA Entamoeba histolytica genomic, DNA sequence.    52   3e-04  2

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

(Q869W6) RecName: Full=Probable calcium/calmodulin-dependent ser...   298   7e-81
AC116982_54(AC116982|pid:none) Dictyostelium discoideum chromoso...   147   2e-34
AB076903_1(AB076903|pid:none) Ciona intestinalis Ci-CaM-K mRNA f...   142   5e-33
(Q63450) RecName: Full=Calcium/calmodulin-dependent protein kina...   136   2e-31
(Q14012) RecName: Full=Calcium/calmodulin-dependent protein kina...   136   2e-31
BC074183_1(BC074183|pid:none) Xenopus laevis MGC82022 protein, m...   136   2e-31
PDBF(1A06) MOL_ID: 1; MOLECULE: CALCIUM/CALMODULIN-DEPENDENT PRO...   136   2e-31
AY890885_1(AY890885|pid:none) Synthetic construct Homo sapiens c...   136   2e-31
L24907_1(L24907|pid:none) Rattus norvegicus calcium/calmodulin-d...   136   2e-31
AY335686_1(AY335686|pid:none) Synthetic construct Homo sapiens C...   135   7e-31

 psg: 0.69  gvh: 0.57  alm: 0.34  top: 0.53  tms: 0.00  mit: 0.17  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 48.0 %: cytoplasmic
	 32.0 %: nuclear
	 16.0 %: mitochondrial
	  4.0 %: Golgi

>> prediction for SSH378 is cyt

>SSH378Z.Seq
----------CAGATTTTGGTCTTAGTAAAATATTTGGAACTTGGTGAAGCATTGGAAAC
AAGTTGTGGTACACCAGATTATGTTGCACCAGAAGTTTTAACTGGTGGTTCATATGATAA
TGCAGTCGATATGTGGTCAATTGGTGTCATTACCTATATTTTATTATGTGGTTTCCCACC
ATTCTATGCTTCATCTCAAAACTTATTATTTGAAAAAATTTTAACCGCTGATTATGATTT
CCCAGAACCAGAATGGACTCATGTCTCTGAACATGCCAAAGCTTTCATTAGAAACTTAAT
TGTCAAAGATCCAGATCAACGTCATACTGCCAAACAATGTCTTGATGACCTTTGGCTCTC
TGGTAGTGATCAATCAATTGGTTCTGCTGCTGATCTCCACTCTCATTTCGCTGAAAAGAT
GAAGAAATATAATGACCAAAGAAGAGGTGGTCAATCTTCAAATAATTAAATTTAATAATA
ATAATAATAA