>SSG652 (SSG652Q) /CSM/SS/SSG6-C/SSG652Q.Seq.d/
XXXXXXXXXXTAATAATAATAATAATAATAATAATAAAATGTCAGAAAGTGTAGGGAATA
TAAGAATTGACCCAAGGGATACAATATTTGCAAAAATTATTTCTGGTGCAATCCCATCAA
AAAAATTTTACGATGATGAATATTGTATTGCAATCGAAGATATTAACCCACAAGCACCAG
TACATCTTTTAGTTATTCCAAAACTTGCCGTTGGTGGTCTTAGTGATGTCGCCAATGTTG
ACCTTGAAAAATACAAAGAATCTATGGGTCATATCATGTCAAAAATTCATCATATCGCTT
CTCTTAAAGGTGCTGATTCTTACAGATTGGTCATTAATGAAGGTGTTTTAGGTCAACAAT
CTGTTAGATGGTTACATATTCATATCCTTGGTGGTAGACAAATGAATTGGCCACCAGGCT
AATTTCAATTAAAGAATTCTTCATTGTACCTATTTAAACCTTTTACTAATAATAGTAAAG
AAAATTCACCATTGGCACGTACATAATAAAAAAATATATCCTTTTAATGGATCACTAGC

---NNNNNNNNKMSESVGNIRIDPRDTIFAKIISGAIPSKKFYDDEYCIAIEDINPQAPV
HLLVIPKLAVGGLSDVANVDLEKYKESMGHIMSKIHHIASLKGADSYRLVINEGVLGQQS
VRWLHIHILGGRQMNWPPG*fqlknsslylfkpftnnskensplart**knisf*wits

Frame A:
---NNNNNNNNKMSESVGNIRIDPRDTIFAKIISGAIPSKKFYDDEYCIAIEDINPQAPV
HLLVIPKLAVGGLSDVANVDLEKYKESMGHIMSKIHHIASLKGADSYRLVINEGVLGQQS
VRWLHIHILGGRQMNWPPG*fqlknsslylfkpftnnskensplart**knisf*wits


Frame B:
---iiiiiiiikcqkv*gi*eltqgiqylqklflvqshqknftmmnivlqskilthkhqy
if*lfqnlplvvlvmspmltlkntknlwviscqkfiislllkvliltdwslmkvf*vnnl
ldgyifislvvdk*ighqanfn*rilhctylnllliivkkihhwhvhnkkiypfngsl


Frame C:
---********nvrkcreykn*pkgynicknyfwcnpikkilr**ilycnrry*ptstst
sfsysktcrwws**crqc*p*kiqriygsyhvknssyrfs*rc*flqigh**rcfrstic
*mvtysypww*tnelatrlisikeffivpi*tfy****rkftigtyiikkyillmdh*

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

VSB635 (VSB635Q) /CSM/VS/VSB6-B/VSB635Q.Seq.d/                        912   0.0
SSK564 (SSK564Q) /CSM/SS/SSK5-C/SSK564Q.Seq.d/                        912   0.0
SSJ812 (SSJ812Q) /CSM/SS/SSJ8-A/SSJ812Q.Seq.d/                        912   0.0
SSI289 (SSI289Q) /CSM/SS/SSI2-D/SSI289Q.Seq.d/                        912   0.0
SSH491 (SSH491Q) /CSM/SS/SSH4-D/SSH491Q.Seq.d/                        912   0.0
SSH481 (SSH481Q) /CSM/SS/SSH4-D/SSH481Q.Seq.d/                        912   0.0
SSH478 (SSH478Q) /CSM/SS/SSH4-D/SSH478Q.Seq.d/                        912   0.0
SSH331 (SSH331Q) /CSM/SS/SSH3-B/SSH331Q.Seq.d/                        912   0.0
SSG652 (SSG652Q) /CSM/SS/SSG6-C/SSG652Q.Seq.d/                        912   0.0
SSF891 (SSF891Q) /CSM/SS/SSF8-D/SSF891Q.Seq.d/                        912   0.0

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

AB029922|AB029922.1 Dictyostelium discoideum DD-1 mRNA, complete cds.   757   0.0    2
U61986|U61986.1 Dictyostelium discoideum PkiA (pkiA) mRNA, complete cds.   519   0.0    5
AP003192|AP003192.2 Clostridium perfringens DNA, complete genome, section 8/10.    48   1e-04  6
BH605184|BH605184.1 BOGSB09TR BOGS Brassica oleracea genomic clone BOGSB09, DNA sequence.    48   0.015  2
CK435395|CK435395.1 GQ0064.TB_I01 GQ006: Cambium and phloem from mature trees Picea glauca cDNA clone GQ0064_I01 3', mRNA sequence.    50   0.033  1
AC120630|AC120630.5 Rattus norvegicus clone CH230-337O5, WORKING DRAFT SEQUENCE, 2 unordered pieces.    34   0.086  5
AE014836|AE014836.1 Plasmodium falciparum 3D7 chromosome 11 section 1 of 8 of the complete sequence.    38   0.087  7
BH724763|BH724763.1 BOMPT20TF BO_2_3_KB Brassica oleracea genomic clone BOMPT20, DNA sequence.    48   0.13   1
AE004014|AE004014.1 Xylella fastidiosa 9a5c, section 160 of 229 of the complete genome.    34   0.31   2
AF056206|AF056206.1 Plasmodium falciparum putative protein kinase C interacting protein 1 (pkci1) gene, complete cds.    44   0.36   2

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

(Q23921) RecName: Full=Protein pkiA; AltName: Full=Protein DD-1;...   260   2e-68
U61986_1(U61986|pid:none) Dictyostelium discoideum PkiA (pkiA) m...   236   4e-61
BC068885_1(BC068885|pid:none) Xenopus laevis hypothetical protei...   115   7e-25
BC135760_1(BC135760|pid:none) Xenopus tropicalis cDNA clone IMAG...   113   3e-24
FN314883_1(FN314883|pid:none) Schistosoma japonicum isolate Anhu...   113   3e-24
AY812855_1(AY812855|pid:none) Schistosoma japonicum SJCHGC07198 ...   113   3e-24
FN314882_1(FN314882|pid:none) Schistosoma japonicum isolate Anhu...   113   3e-24
AY860950_1(AY860950|pid:none) Bombyx mori protein kinase c inhib...   111   1e-23
BA000045_929(BA000045|pid:none) Gloeobacter violaceus PCC 7421 D...   110   2e-23
(Q8SQ21) RecName: Full=Histidine triad nucleotide-binding protei...   110   3e-23

 psg: 0.74  gvh: 0.37  alm: 0.38  top: 0.53  tms: 0.00  mit: 0.20  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 56.0 %: cytoplasmic
	 28.0 %: nuclear
	  8.0 %: mitochondrial
	  4.0 %: cytoskeletal
	  4.0 %: vesicles of secretory system

>> prediction for SSG652 is cyt

>SSG652Z.Seq
----------TAATAATAATAATAATAATAATAATAAAATGTCAGAAAGTGTAGGGAATA
TAAGAATTGACCCAAGGGATACAATATTTGCAAAAATTATTTCTGGTGCAATCCCATCAA
AAAAATTTTACGATGATGAATATTGTATTGCAATCGAAGATATTAACCCACAAGCACCAG
TACATCTTTTAGTTATTCCAAAACTTGCCGTTGGTGGTCTTAGTGATGTCGCCAATGTTG
ACCTTGAAAAATACAAAGAATCTATGGGTCATATCATGTCAAAAATTCATCATATCGCTT
CTCTTAAAGGTGCTGATTCTTACAGATTGGTCATTAATGAAGGTGTTTTAGGTCAACAAT
CTGTTAGATGGTTACATATTCATATCCTTGGTGGTAGACAAATGAATTGGCCACCAGGCT
AATTTCAATTAAAGAATTCTTCATTGTACCTATTTAAACCTTTTACTAATAATAGTAAAG
AAAATTCACCATTGGCACGTACATAATAAAAAAATATATCCTTTTAATGGATCACTAGC