>SSG635 (SSG635Q) /CSM/SS/SSG6-B/SSG635Q.Seq.d/
GAAATTGTTATATTTATTTAACTAATGATGTAAATGATGCAAATAATGGTACATTCCATT
TCTATGATAGTCAACCAACTGATAGTAATTGGAAATTATTATCAACAATTAGAGAGGGTG
TTTCAAATGTTGAATCATTTGATCAACAACTTTTAGACTCTTTGACATTAATTGGTCAAG
ATTATGGTGACTATGTCTCACTTTGGAGAAAGTTTGATGGAATATTTGGTAGAGTTAATG
GATTGGTAACTTATTTACCAATTGCCACAGGTTATATGGAGCATTTGTTCCAACAAATGA
TTCAAGATGGTGTTCAACATATTGAGGTTAGAAAGTGTTTTGGAGATTTCTATGACCTAA
CCGGTAAAATCTATGATGATTATTGGTTCGTCCAAACTATGGAAGAATTAGTACTAACAA
CAAGACAAAAATATAATATGTCTGAATTTGCACTTAAAATTATTGGTTGCAATGGCAGAC
ATAATAACCAATCGGTGGTGTATGATGCAATGGTAATGTCATTGGATTTAAGAAATAAAT
ACCCATCAACCTTTGTCGGCTATGATTTGGTCGGTCCAGAGGATGAGGGTTACCCATTAA
TCTATTTCATTGAGCAATTTGCAGAAATTAAAAAATTAGGTTACCAATACCAATATCCAT
TGGATTATTACTTCCATGCTGGTGAAACTATTCTATACAATAATACAAATCTATATGATG
CTATACTTTTAAATACTAAAAGAATCGGCCACGGTATTCAGTTACCAAAACATCCACTAT
TGATGGATTTAGTATTAAAGAATGATATTGGTATTGAAATTTGTCCAATTTCAAATCAAA
TCCTTCAATATGTTTCTGATATGCGTGCTCATCCAGGTTTGGATTTATTAAATAGAGGTT
TACCAGTTACTATCTCACCTGATGATCCTGCAATCTTTAATTATGGTGGCCTAAGTTATG
ATTTCTTTGAAGTCACTTATTCTTGGGGTTTAAATCTTCAACAATTAAAACAATTAGCAA
TCAATTCAATTAATCATTCAAATACTTTTAATCAATCCGAATATAATTTACTCTATAATG
CTTGGGAAGTAAAATGGTTTAATTTTATTGATTATATCATTAATACTTATTCAAATATTT
AAAAAAAAAAAAAAATAATAAAAAAAAAAAAATAAAAAAATAAAAAAAAAATAATAATAA
TAATCAAAATAATATAAAAAA

NCYIYLTNDVNDANNGTFHFYDSQPTDSNWKLLSTIREGVSNVESFDQQLLDSLTLIGQD
YGDYVSLWRKFDGIFGRVNGLVTYLPIATGYMEHLFQQMIQDGVQHIEVRKCFGDFYDLT
GKIYDDYWFVQTMEELVLTTRQKYNMSEFALKIIGCNGRHNNQSVVYDAMVMSLDLRNKY
PSTFVGYDLVGPEDEGYPLIYFIEQFAEIKKLGYQYQYPLDYYFHAGETILYNNTNLYDA
ILLNTKRIGHGIQLPKHPLLMDLVLKNDIGIEICPISNQILQYVSDMRAHPGLDLLNRGL
PVTISPDDPAIFNYGGLSYDFFEVTYSWGLNLQQLKQLAINSINHSNTFNQSEYNLLYNA
WEVKWFNFIDYIINTYSNI*kkkkiikkkk*knkkkiiiiikii*k

Frame A:
eivifi*lmm*mmqimvhsismivnqlivignyyqqlervfqmlnhlinnf*tl*h*lvk
imvtmshfgeslmeylvelmdw*liyqlpqviwsicsnk*fkmvfnilrlesvleismt*
pvksmmiigssklwkn*y*qqdkniiclnlhlkllvamadiitnrwcmmqw*chwi*ein
thqplsamiwsvqrmrvth*sislsnlqklkn*vtntnihwiitsmlvklfytiiqiymm
lyf*ilkesatvfsyqnihy*wi*y*rmilvlkfvqfqiksfnmflicvliqvwiy*iev
yqllshlmilqslimva*vmislkslilgv*ifnn*nn*qsiqliiqillinpniiysim
lgk*nglilliisliliqifkkkkk**kkknkkikkk****sk*ykk


Frame B:
kllylfn**ck*ck*wyipfl**stn***leiiinn*rgcfkc*ii*sttfrlfdinwsr
lw*lcltlekv*wniw*s*wignlftnchrlygafvptndsrwcsty*g*kvfwrfl*pn
r*nl**llvrpnygristnnktki*yv*ict*nywlqwqt**piggv*cngnvigfkk*i
pinlcrl*fgrsrg*glpinlfh*aicrn*kirlpipisiglllpcw*nysiq*yksi*c
ytfky*knrprysvtktstidgfsike*ywy*nlsnfksnpsicf*yacssrfgfik*rf
tsyylt**scnl*lwwpkl*fl*shlflgfksstiktisnqfn*sfkyf*siri*ftl*c
lgskmv*fy*lyh*ylfkylkkkknnkkkkikk*kknnnnnqnnik


Frame C:
NCYIYLTNDVNDANNGTFHFYDSQPTDSNWKLLSTIREGVSNVESFDQQLLDSLTLIGQD
YGDYVSLWRKFDGIFGRVNGLVTYLPIATGYMEHLFQQMIQDGVQHIEVRKCFGDFYDLT
GKIYDDYWFVQTMEELVLTTRQKYNMSEFALKIIGCNGRHNNQSVVYDAMVMSLDLRNKY
PSTFVGYDLVGPEDEGYPLIYFIEQFAEIKKLGYQYQYPLDYYFHAGETILYNNTNLYDA
ILLNTKRIGHGIQLPKHPLLMDLVLKNDIGIEICPISNQILQYVSDMRAHPGLDLLNRGL
PVTISPDDPAIFNYGGLSYDFFEVTYSWGLNLQQLKQLAINSINHSNTFNQSEYNLLYNA
WEVKWFNFIDYIINTYSNI*kkkkiikkkk*knkkkiiiiikii*k

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SSG635 (SSG635Q) /CSM/SS/SSG6-B/SSG635Q.Seq.d/                       2260   0.0
SSE144 (SSE144Q) /CSM/SS/SSE1-B/SSE144Q.Seq.d/                       2258   0.0
AFD748 (AFD748Q) /CSM/AF/AFD7-B/AFD748Q.Seq.d/                       1350   0.0
AFM279 (AFM279Q) /CSM/AF/AFM2-D/AFM279Q.Seq.d/                       1275   0.0
SFJ863 (SFJ863Q) /CSM/SF/SFJ8-C/SFJ863Q.Seq.d/                       1217   0.0
CFI823 (CFI823Q) /CSM/CF/CFI8-A/CFI823Q.Seq.d/                       1195   0.0
SSJ756 (SSJ756Q) /CSM/SS/SSJ7-C/SSJ756Q.Seq.d/                         40   0.078
SSH502 (SSH502Q) /CSM/SS/SSH5-A/SSH502Q.Seq.d/                         40   0.078
SSC454 (SSC454Q) /CSM/SS/SSC4-C/SSC454Q.Seq.d/                         40   0.078
SLK303 (SLK303Q) /CSM/SL/SLK3-A/SLK303Q.Seq.d/                         40   0.078

                                                               Score     E
Sequences producing significant alignments:                    (bits)  Value  N

AC116305|AC116305.2 Dictyostelium discoideum chromosome 2 map 1005175-1418323 strain AX4, complete sequence.  2250  0.0  1
AF063866|AF063866.1 Melanoplus sanguinipes entomopoxvirus, complete genome.    36  0.007  12
AL627233|AL627233.9 Human DNA sequence from clone RP11-305I2 on chromosome X.    50  0.067  1
AC137414|AC137414.1 Rattus norvegicus clone CH230-unknown, *** SEQUENCING IN PROGRESS ***, 7 unordered pieces.    42  0.13  2
BG607523|BG607523.1 WHE2494_H08_P16ZS Triticum monococcum early reproductive apex cDNA library Triticum monococcum cDNA clone WHE2494_H08_P16, mRNA sequence.    38  0.15  3
BX088724|BX088724.4 Zebrafish DNA sequence *** SEQUENCING IN PROGRESS *** from clone.    48  0.26  1
BZ624701|BZ624701.1 ig92h06.g1 WGS-ZmaysF (DH5a methyl filtered) Zea mays genomic clone ig92h06 5', DNA sequence.    44  0.36  2
AC129600|AC129600.2 Mus musculus chromosome UNK clone RP23-361D7, WORKING DRAFT SEQUENCE, 10 unordered pieces.    48  0.42  5
BX640995|BX640995.1 Homo sapiens mRNA; cDNA DKFZp686H07252 (from clone DKFZp686H07252); complete cds.    38  0.54  2
AL844509|AL844509.1 Plasmodium falciparum chromosome 13.          38  0.58  13

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC116305_2(AC116305|pid:none) Dictyostelium discoideum chromosom...   785   0.0
(Q553U5) RecName: Full=Protein CECR1 homolog; Flags: Precursor;       783   0.0
AY902779_1(AY902779|pid:none) Gallus gallus CECR1 (CECR1) mRNA, ...   241   3e-62
BC051755_1(BC051755|pid:none) Homo sapiens cat eye syndrome chro...   238   2e-61
AK304818_1(AK304818|pid:none) Homo sapiens cDNA FLJ58672 complet...   237   6e-61
(Q9NZK5) RecName: Full=Cat eye syndrome critical region protein ...   237   6e-61
AF190746_1(AF190746|pid:none) Homo sapiens CECR1 protein mRNA, c...   237   6e-61
AJ720326_1(AJ720326|pid:none) Gallus gallus mRNA for hypothetica...   234   4e-60
(Q5RC46) RecName: Full=Cat eye syndrome critical region protein ...   233   1e-59
(P58780) RecName: Full=Cat eye syndrome critical region protein ...   231   5e-59

 psg: 0.75  gvh: 0.36  alm: 0.44  top: 0.53  tms: 0.00  mit: 0.17  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 48.0 %: cytoplasmic
	 40.0 %: nuclear
	  4.0 %: cytoskeletal
	  4.0 %: mitochondrial
	  4.0 %: vesicles of secretory system

>> prediction for SSG635 is cyt

>SSG635Z.Seq
----------TACCCATTAATCTATTTCATTGAGCAAATTTGCAGAAATTAAAAAATTAG
GTTACCAATACCAATATCCATTGGATTATTACTTCCATGCTGGTGAAACTATTCTATACA
ATAATACAAATCTATATGATGCTATACTTTTAAATACTAAAAGAATCGGCCACGGTATTC
AGTTACCAAAACATCCACTATTGATGGATTTAGTATTAAAGAATGATATTGGTATTGAAA
TTTGTCCAATTTCAAATCAAATCCTTCAATATGTTTCTGATATGCGTGCTCATCCAGGTT
TGGATTTATTAAATAGAGGTTTACCAGTTACTATCTCACCTGATGATCCTGCAATCTTTA
ATTATGGTGGCCTAAGTTATGATTTCTTTGAAGTCACTTATTCTTGGGGTTTAAATCTTC
AACAATTAAAACAATTAGCAATCAATTCAATTAATCATTCAAATACTTTTAATCAATCCG
AATATAATTTACTCTATAATGCTTGGGAAGTAAAATGGTTTAATTTTATTGATTATATCA
TTAATACTTATTCAAATATTTAAAAAAAAAAAAAAAAGTAAAAAAAAAAAAAAAAAAAAA

>SSG635E.Seq
GAAATTGTTATATTTATTTAACTAATGATGTAAATGATGCAAATAATGGTACATTCCATT
TCTATGATAGTCAACCAACTGATAGTAATTGGAAATTATTATCAACAATTAGAGAGGGTG
TTTCAAATGTTGAATCATTTGATCAACAACTTTTAGACTCTTTGACATTAATTGGTCAAG
ATTATGGTGACTATGTCTCACTTTGGAGAAAGTTTGATGGAATATTTGGTAGAGTTAATG
GATTGGTAACTTATTTACCAATTGCCACAGGTTATATGGAGCATTTGTTCCAACAAATGA
TTCAAGATGGTGTTCAACATATTGAGGTTAGAAAGTGTTTTGGAGATTTCTATGACCTAA
CCGGTAAAATCTATGATGATTATTGGTTCGTCCAAACTATGGAAGAATTAGTACTAACAA
CAAGACAAAAATATAATATGTCTGAATTTGCACTTAAAATTATTGGTTGCAATGGCAGAC
ATAATAACCAATCGGTGGTGTATGATGCAATGGTAATGTCATTGGATTTAAGAAATAAAT
ACCCATCAACCTTTGTCGGCTATGATTTGGTCGGTCCAGAGGATGAGGGTTACCCATTAA
TCTATTTCATTGAGCAATTTGCAGAAATTAAAAAATTAGGTTACCAATACCAATATCCAT
TGGATTATTACTTCCATGCTGGTGAAACTATTCTATACAATAATACAAATCTATATGATG
CTATACTTTTAAATACTAAAAGAATCGGCCACGGTATTCAGTTACCAAAACATCCACTAT
TGATGGATTTAGTATTAAAGAATGATATTGGTATTGAAATTTGTCCAATTTCAAATCAAA
TCCTTCAATATGTTTCTGATATGCGTGCTCATCCAGGTTTGGATTTATTAAATAGAGGTT
TACCAGTTACTATCTCACCTGATGATCCTGCAATCTTTAATTATGGTGGCCTAAGTTATG
ATTTCTTTGAAGTCACTTATTCTTGGGGTTTAAATCTTCAACAATTAAAACAATTAGCAA
TCAATTCAATTAATCATTCAAATACTTTTAATCAATCCGAATATAATTTACTCTATAATG
CTTGGGAAGTAAAATGGTTTAATTTTATTGATTATATCATTAATACTTATTCAAATATTT
AAAAAAAAAAAAAAATAATAAAAAAAAAAAAATAAAAAAATAAAAAAAAAATAATAATAA
TAATCAAAATAATATAAAAAA