>SSG485 (SSG485Q) /CSM/SS/SSG4-D/SSG485Q.Seq.d/
ATCTCAAGTTAAAATGACTAGAATTAATCGTAAATACTCTTCTGATCTTAAATCAACTGA
ATGTTGTTTATTAGATTCACCAGATGTTCTCTATGTTTGGGTTGGTTCAAATTGTTCAGC
TTCCTTGGAGAATATTGTACTTATCTTTGTTAATGACTATTGTAACTATTATAGTATCCC
AATTGATTCCATTCAAAAGGTAGTTCAATACAATGAATCAATTGAATTCAAATTAAGATT
TAAAGCTTGGGATAGAAAAGAGGAATGGGTTGATCCTCATGAAACTCGTCAATGCCAAGT
TGCCCTACAAAGAACTTTACTCTTCCGTAAACAATATGAAGAGGAACAACAACTATTCAA
AGAATATATGGACTATGCATATTCACTAGGTGATGAAGATGAATTGGAAGACTTTGAAAC
TTGGACTCTCATTAAAAAAGGTTATCTAGATTATCATGGTGAATTAAATCTAAGTTATAG
TGATCAATTAAATGGTACTCTAAGTAGAAGTTTAAGTAATAGTAGTAATGGTAGTAGTAA
TAGTAGTACTTCTCCAAATTTAAATGCTCATATCTCTTCTXXXXXXXXXX

SQVKMTRINRKYSSDLKSTECCLLDSPDVLYVWVGSNCSASLENIVLIFVNDYCNYYSIP
IDSIQKVVQYNESIEFKLRFKAWDRKEEWVDPHETRQCQVALQRTLLFRKQYEEEQQLFK
EYMDYAYSLGDEDELEDFETWTLIKKGYLDYHGELNLSYSDQLNGTLSRSLSNSSNGSSN
SSTSPNLNAHIS---

Frame A:
iss*nd*n*s*ilf*s*in*mlfirftrcslclgwfklfsflgeyctylc**ll*ll*yp
n*fhskgssiq*in*iqiki*slg*krgmg*ss*nssmpscptknftlp*ti*rgtttiq
riyglciftr**r*igrl*nldsh*krlsrlsw*ikskl**sikwysk*kfk****w***
**yfskfkcsylf---


Frame B:
SQVKMTRINRKYSSDLKSTECCLLDSPDVLYVWVGSNCSASLENIVLIFVNDYCNYYSIP
IDSIQKVVQYNESIEFKLRFKAWDRKEEWVDPHETRQCQVALQRTLLFRKQYEEEQQLFK
EYMDYAYSLGDEDELEDFETWTLIKKGYLDYHGELNLSYSDQLNGTLSRSLSNSSNGSSN
SSTSPNLNAHIS---


Frame C:
lklk*lelivntllilnqlnvvy*ihqmfsmfglvqivqlpwrilylsllmtivtiivsq
lipfkr*fntmnqlnsn*dlklgiekrnglilmklvnaklpykelyssvnnmkrnnnysk
niwtmhih*vmkmnwktlklglslkkvi*iimvn*i*vivin*mvl*vev*vivvmvvvi
vvllqi*mlisl---

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SSG485 (SSG485Q) /CSM/SS/SSG4-D/SSG485Q.Seq.d/                       1015   0.0
AHM348 (AHM348Q) /CSM/AH/AHM3-B/AHM348Q.Seq.d/                       1015   0.0
AHH412 (AHH412Q) /CSM/AH/AHH4-A/AHH412Q.Seq.d/                       1015   0.0
CFF766 (CFF766Q) /CSM/CF/CFF7-C/CFF766Q.Seq.d/                       1013   0.0
AHF696 (AHF696Q) /CSM/AH/AHF6-D/AHF696Q.Seq.d/                       1005   0.0
AHD330 (AHD330Q) /CSM/AH/AHD3-B/AHD330Q.Seq.d/                        999   0.0
SHA688 (SHA688Q) /CSM/SH/SHA6-D/SHA688Q.Seq.d/                        991   0.0
CHR853 (CHR853Q) /CSM/CH/CHR8-C/CHR853Q.Seq.d/                        991   0.0
CHH371 (CHH371Q) /CSM/CH/CHH3-C/CHH371Q.Seq.d/                        922   0.0
AHL606 (AHL606Q) /CSM/AH/AHL6-A/AHL606Q.Seq.d/                        922   0.0

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

AP004161|AP004161.3 Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1311_H06.    42   0.007  5
AL714007|AL714007.10 Mouse DNA sequence from clone RP23-295M3 on chromosome X.    36   0.11   6
BH475536|BH475536.1 BOHBA58TR BOHB Brassica oleracea genomic clone BOHBA58, DNA sequence.    48   0.14   1
BH935296|BH935296.1 ode75g01.b1 B.oleracea002 Brassica oleracea genomic, DNA sequence.    48   0.14   1
AC124514|AC124514.2 Mus musculus chromosome UNK clone RP23-450H18, WORKING DRAFT SEQUENCE, 8 unordered pieces.    34   0.39   6
AC138642|AC138642.10 Mus musculus chromosome 3, clone RP23-21O7, complete sequence.    36   0.50   8
AC069186|AC069186.2 Homo sapiens chromosome 1 clone RP11-300G24 map 1, WORKING DRAFT SEQUENCE, 12 unordered pieces.    42   0.59   6
AQ870827|AQ870827.1 nbeb0041C20f CUGI Rice BAC Library (EcoRI) Oryza sativa genomic clone nbeb0041C20f, genomic survey sequence.    38   0.62   2
AC133709|AC133709.8 Medicago truncatula clone mth2-7b3, complete sequence.    34   0.69   5
AC101163|AC101163.1 Mus musculus clone RP23-173P6, LOW-PASS SEQUENCE SAMPLING.    34   0.83   4

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

T30330(T30330) gelsolin-related protein GRP125 - slime mold (Dic...    42   0.009
(Q27319) RecName: Full=Gelsolin, cytoplasmic; AltName: Full=Acti...    40   0.035
S41391(S41391)gelsolin - American lobster                              40   0.035
DQ453500_1(DQ453500|pid:none) Heliocidaris tuberculata advillin ...    39   0.10
DQ453501_1(DQ453501|pid:none) Heliocidaris erythrogramma advilli...    39   0.10
AY261827_1(AY261827|pid:none) Ciona intestinalis cytoplasmic gel...    39   0.13
AY052174_1(AY052174|pid:none) Drosophila simulans isolate sim1 g...    39   0.13
FJ438495_1(FJ438495|pid:none) Epinephelus coioides scinderin-lik...    39   0.13
AY052178_1(AY052178|pid:none) Drosophila simulans isolate sim5 g...    39   0.13
AY052175_1(AY052175|pid:none) Drosophila simulans isolate sim2 g...    39   0.13

 psg: 0.62  gvh: 0.48  alm: 0.39  top: 0.53  tms: 0.00  mit: 0.35  mip: 0.03
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 40.0 %: nuclear
	 28.0 %: cytoplasmic
	 24.0 %: mitochondrial
	  4.0 %: cytoskeletal
	  4.0 %: vesicles of secretory system

>> prediction for SSG485 is nuc

>SSG485F.Seq
ATCTCAAGTTAAAATGACTAGAATTAATCGTAAATACTCTTCTGATCTTAAATCAACTGA
ATGTTGTTTATTAGATTCACCAGATGTTCTCTATGTTTGGGTTGGTTCAAATTGTTCAGC
TTCCTTGGAGAATATTGTACTTATCTTTGTTAATGACTATTGTAACTATTATAGTATCCC
AATTGATTCCATTCAAAAGGTAGTTCAATACAATGAATCAATTGAATTCAAATTAAGATT
TAAAGCTTGGGATAGAAAAGAGGAATGGGTTGATCCTCATGAAACTCGTCAATGCCAAGT
TGCCCTACAAAGAACTTTACTCTTCCGTAAACAATATGAAGAGGAACAACAACTATTCAA
AGAATATATGGACTATGCATATTCACTAGGTGATGAAGATGAATTGGAAGACTTTGAAAC
TTGGACTCTCATTAAAAAAGGTTATCTAGATTATCATGGTGAATTAAATCTAAGTTATAG
TGATCAATTAAATGGTACTCTAAGTAGAAGTTTAAGTAATAGTAGTAATGGTAGTAGTAA
TAGTAGTACTTCTCCAAATTTAAATGCTCATATCTCTTCT----------