>SSG305 (SSG305Q) /CSM/SS/SSG3-A/SSG305Q.Seq.d/
XXXXXXXXXXTGACATTCTCGCAACATTGCATGTACATCAAGAAGATACTGTTGCAGTAG
CATGCTATAAGGAAGGTTTATTACCAATCAGTCAAAACTCTTTTATTATTGGTGATATCT
CTTATCACAACTATGAAGGTATTTCAATCAATGCTCAAGAACAAGAACGTATCGTTAAAT
CGTTGGGACCTGTAAATAAGAATTTAATTCTCCGTAATCACGGTATCGTTTCATGTGGTA
ATTCCATCGAAGAAGCTTTCTTTTTCCTCTATCAACTCGTTAAAACTTGTGAAATCCAAG
TTAAAATGTTATCAATGGTTGGTGGTGATATTTCAAAATTAGATATTCCAGATAAACAAA
TTAGAGATTTTTCAACTCGTACAGCTGCTTCTTTCACCAAACAAGGAAATGGTAAAAAAG
AATGGAAATCTTATTATAGAATTGTTGAAAAATTAGATGATTCTTTTAAAAATTAAATTA
AATTAAAATAAAATAAAATAAAATAAAAAAAAAAAAAAAAAAAA

---DILATLHVHQEDTVAVACYKEGLLPISQNSFIIGDISYHNYEGISINAQEQERIVKS
LGPVNKNLILRNHGIVSCGNSIEEAFFFLYQLVKTCEIQVKMLSMVGGDISKLDIPDKQI
RDFSTRTAASFTKQGNGKKEWKSYYRIVEKLDDSFKN*iklk*nkik*kkkkkk

Frame A:
---DILATLHVHQEDTVAVACYKEGLLPISQNSFIIGDISYHNYEGISINAQEQERIVKS
LGPVNKNLILRNHGIVSCGNSIEEAFFFLYQLVKTCEIQVKMLSMVGGDISKLDIPDKQI
RDFSTRTAASFTKQGNGKKEWKSYYRIVEKLDDSFKN*iklk*nkik*kkkkkk


Frame B:
---tfsqhcmyikkillq*hairkvyyqsvktllllvislittmkvfqsmlknknvslnr
wdl*iri*fsvitvsfhvvipskklsfssinslklvksklkcyqwlvvifqn*ifqinkl
eifqlvqlllspnkemvkkngnliiellkn*millkikln*nkik*nkkkkkk


Frame C:
---hsrniactsrryccssml*grfitnqsklfyyw*yllsql*ryfnqcsrtrtyr*iv
gtck*efnsp*sryrfmw*fhrrsflfplstr*nl*nps*nvingww*yfkirysr*tn*
rffnsyscffhqtrkw*krmeill*nc*kir*ff*kln*ikik*nkikkkkkk

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SSG305 (SSG305Q) /CSM/SS/SSG3-A/SSG305Q.Seq.d/                        902   0.0
SSK395 (SSK395Q) /CSM/SS/SSK3-D/SSK395Q.Seq.d/                        894   0.0
SSD356 (SSD356Q) /CSM/SS/SSD3-C/SSD356Q.Seq.d/                        894   0.0
SSJ796 (SSJ796Q) /CSM/SS/SSJ7-D/SSJ796Q.Seq.d/                        811   0.0
VSI387 (VSI387Q) /CSM/VS/VSI3-D/VSI387Q.Seq.d/                        402   e-111
AHH872 (AHH872Q) /CSM/AH/AHH8-C/AHH872Q.Seq.d/                        240   2e-62
SSI485 (SSI485Q) /CSM/SS/SSI4-D/SSI485Q.Seq.d/                         60   4e-08
CHK287 (CHK287Q) /CSM/CH/CHK2-D/CHK287Q.Seq.d/                         38   0.13
SFH305 (SFH305Q) /CSM/SF/SFH3-A/SFH305Q.Seq.d/                         36   0.51
CHN782 (CHN782Q) /CSM/CH/CHN7-D/CHN782Q.Seq.d/                         36   0.51

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

AE011230|AE011230.1 Leptospira interrogans serovar lai str. 56601 chromosome I, section39 of 397 of the complete sequence.    40   0.012  2
AE011545|AE011545.1 Leptospira interrogans serovar lai str. 56601 chromosome I, section 354 of 397 of the complete sequence.    38   0.045  2
AE011538|AE011538.1 Leptospira interrogans serovar lai str. 56601 chromosome I, section 347 of 397 of the complete sequence.    38   0.051  2
AE011577|AE011577.1 Leptospira interrogans serovar lai str. 56601 chromosome I, section 386 of 397 of the complete sequence.    40   0.052  2
AB041512|AB041512.1 Homo sapiens genomic DNA, chromosome 6q21, clone:520L4.    32   0.052  8
AE011362|AE011362.1 Leptospira interrogans serovar lai str. 56601 chromosome I, section 171 of 397 of the complete sequence.    40   0.059  4
AE011503|AE011503.1 Leptospira interrogans serovar lai str. 56601 chromosome I, section 312 of 397 of the complete sequence.    40   0.062  3
AE011601|AE011601.1 Leptospira interrogans serovar lai str. 56601 chromosome II, section 13 of 34 of the complete sequence.    38   0.12   3
AE011257|AE011257.1 Leptospira interrogans serovar lai str. 56601 chromosome I, section 66 of 397 of the complete sequence.    38   0.13   3
AE011504|AE011504.1 Leptospira interrogans serovar lai str. 56601 chromosome I, section 313 of 397 of the complete sequence.    42   0.18   3

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF189771_1(AF189771|pid:none) Mus musculus alpha adducin mRNA, c...   110   2e-23
BC034368_1(BC034368|pid:none) Mus musculus adducin 1 (alpha), mR...   110   2e-23
(Q9QYC0) RecName: Full=Alpha-adducin; AltName: Full=Erythrocyte ...   110   2e-23
AF096839_1(AF096839|pid:none) Mus musculus alpha-2 protein (ADD1...   110   2e-23
S18207(S18207;B56696) adducin alpha chain, splice form 1 - human...   110   2e-23
L29296_1(L29296|pid:none) Human (clone: SS20B/E6.0) alpha-adduci...   110   2e-23
AL121750_1(AL121750|pid:none) Human DNA sequence from clone RP3-...   110   2e-23
(P35611) RecName: Full=Alpha-adducin; AltName: Full=Erythrocyte ...   110   2e-23
BC013393_1(BC013393|pid:none) Homo sapiens adducin 1 (alpha), mR...   110   2e-23
Z49082_1(Z49082|pid:none) R.norvegicus mRNA for alpha-adducin (n...   110   2e-23

 psg: 0.75  gvh: 0.40  alm: 0.46  top: 0.53  tms: 0.00  mit: 0.11  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.20  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 44.0 %: cytoplasmic
	 36.0 %: nuclear
	 12.0 %: cytoskeletal
	  4.0 %: mitochondrial
	  4.0 %: peroxisomal

>> prediction for SSG305 is cyt

>SSG305Z.Seq
----------TGACATTCTCGCAACATTGCATGTACATCAAGAAGATACTGTTGCAGTAG
CATGCTATAAGGAAGGTTTATTACCAATCAGTCAAAACTCTTTTATTATTGGTGATATCT
CTTATCACAACTATGAAGGTATTTCAATCAATGCTCAAGAACAAGAACGTATCGTTAAAT
CGTTGGGACCTGTAAATAAGAATTTAATTCTCCGTAATCACGGTATCGTTTCATGTGGTA
ATTCCATCGAAGAAGCTTTCTTTTTCCTCTATCAACTCGTTAAAACTTGTGAAATCCAAG
TTAAAATGTTATCAATGGTTGGTGGTGATATTTCAAAATTAGATATTCCAGATAAACAAA
TTAGAGATTTTTCAACTCGTACAGCTGCTTCTTTCACCAAACAAGGAAATGGTAAAAAAG
AATGGAAATCTTATTATAGAATTGTTGAAAAATTAGATGATTCTTTTAAAAATTAAATTA
AATTAAAATAAAATAAAATAAAATAAAAAAAAAAAAAAAAAAAA