>SSG280 (SSG280Q) /CSM/SS/SSG2-D/SSG280Q.Seq.d/
GAGTAGTTTTCCGTAGAATTAAAATTAATTTCACATTAGCTTTAATCTATAATCTTTGTG
CTGTTCCACTAGCCGCTGGTTTATTTAGAGTAATCTTTGGTGTGTCTTTACCACCAATGG
CTGCTGCTGCTGCAATGGTAGTTTCTTCATTATCAGTTTTATCTTCTTCATTATTATTAA
AACTTTATTCTTCACCAAATTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAXXXXXXXXXX

VVFRRIKINFTLALIYNLCAVPLAAGLFRVIFGVSLPPMAAAAAMVVSSLSVLSSSLLLK
LYSSPN*kkkkkkkkkkkkkkk---

Frame A:
e*fsvelklish*l*siifvlfh*plvyle*slvclyhqwllllqw*flhyqfyllhyy*
nfilhqikkkkkkkkkkkkkkk---


Frame B:
ssfp*n*n*fhisfnl*slccstsrwfi*snlwcvfttngccccngsffiisfiffiiik
tlfftklkkkkkkkkkkkkkkk---


Frame C:
VVFRRIKINFTLALIYNLCAVPLAAGLFRVIFGVSLPPMAAAAAMVVSSLSVLSSSLLLK
LYSSPN*kkkkkkkkkkkkkkk---

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SSL788 (SSL788Q) /CSM/SS/SSL7-D/SSL788Q.Seq.d/                        398   e-110
SSI134 (SSI134Q) /CSM/SS/SSI1-B/SSI134Q.Seq.d/                        398   e-110
SSG280 (SSG280Q) /CSM/SS/SSG2-D/SSG280Q.Seq.d/                        398   e-110
SSC204 (SSC204Q) /CSM/SS/SSC2-A/SSC204Q.Seq.d/                        398   e-110
SSM483 (SSM483Q) /CSM/SS/SSM4-D/SSM483Q.Seq.d/                        389   e-107
SSJ731 (SSJ731Q) /CSM/SS/SSJ7-B/SSJ731Q.Seq.d/                        375   e-103
SHA773 (SHA773Q) /CSM/SH/SHA7-D/SHA773Q.Seq.d/                        371   e-102
CHO653 (CHO653Q) /CSM/CH/CHO6-C/CHO653Q.Seq.d/                        276   2e-73
FC-AD01 (FC-AD01Q) /CSM/FC/FC-AD/FC-AD01Q.Seq.d/                       40   0.016
VFM704 (VFM704Q) /CSM/VF/VFM7-A/VFM704Q.Seq.d/                         38   0.062

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

AC116984|AC116984.2 Dictyostelium discoideum chromosome 2 map 2567470-3108875 strain AX4, complete sequence.   398   e-107  1
AC117072|AC117072.2 Dictyostelium discoideum chromosome 2 map 3323568-3470138 strain AX4, complete sequence.    40   0.001  6
AC116957|AC116957.2 Dictyostelium discoideum chromosome 2 map 1685067-2090751 strain AX4, complete sequence.    32   0.002  9
AC115577|AC115577.2 Dictyostelium discoideum chromosome 2 map 4657875-4914984 strain AX4, complete sequence.    40   0.002  8
AC109190|AC109190.5 Mus musculus clone RP24-212L9, WORKING DRAFT SEQUENCE, 4 ordered pieces.    52   0.004  1
AC117176|AC117176.2 Dictyostelium discoideum chromosome 2 map 5018074-5200947 strain AX4, complete sequence.    40   0.010  8
AC093100|AC093100.1 Drosophila melanogaster, chromosome 2L, region 26A-26D, BAC clone BACR05J04, complete sequence.    40   0.016  4
AC116305|AC116305.2 Dictyostelium discoideum chromosome 2 map 1005175-1418323 strain AX4, complete sequence.    34   0.020  9
AC104421|AC104421.2 Homo sapiens chromosome 8 clone RP11-97P4 map 8, LOW-PASS SEQUENCE SAMPLING.    32   0.021  5
AC115612|AC115612.2 Dictyostelium discoideum chromosome 2 map 6245135-6357017 strain AX4, complete sequence.    36   0.028  5

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC116984_190(AC116984|pid:none) Dictyostelium discoideum chromos...    72   5e-12
AM920430_149(AM920430|pid:none) Penicillium chrysogenum Wisconsi...    44   0.002
AP007150_91(AP007150|pid:none) Aspergillus oryzae RIB40 genomic ...    42   0.007
AP007161_714(AP007161|pid:none) Aspergillus oryzae RIB40 genomic...    41   0.011
AB172173_1(AB172173|pid:none) Macaca fascicularis brain cDNA clo...    41   0.015
CP000412_524(CP000412|pid:none) Lactobacillus delbrueckii subsp....    41   0.015
AM920421_233(AM920421|pid:none) Penicillium chrysogenum Wisconsi...    41   0.015
CR382124_165(CR382124|pid:none) Kluyveromyces lactis strain NRRL...    40   0.019
BC143973_1(BC143973|pid:none) Homo sapiens ATPase, Cu++ transpor...    40   0.025
BC143975_1(BC143975|pid:none) Homo sapiens ATPase, Cu++ transpor...    40   0.025

 psg: 0.92  gvh: 0.69  alm: 0.31  top: 0.33  tms: 0.07  mit: 0.60  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.40  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 1.00  tyr: 0.71  leu: 0.00  gpi: 1.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 1.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 0.00 

	 36.0 %: plasma membrane
	 32.0 %: extracellular, including cell wall
	 20.0 %: endoplasmic reticulum
	 12.0 %: Golgi

>> prediction for SSG280 is pla

>SSG280F.Seq
GAGTAGTTTTCCGTAGAATTAAAATTAATTTCACATTAGCTTTAATCTATAATCTTTGTG
CTGTTCCACTAGCCGCTGGTTTATTTAGAGTAATCTTTGGTGTGTCTTTACCACCAATGG
CTGCTGCTGCTGCAATGGTAGTTTCTTCATTATCAGTTTTATCTTCTTCATTATTATTAA
AACTTTATTCTTCACCAAATTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAA----------