>SSF506 (SSF506Q) /CSM/SS/SSF5-A/SSF506Q.Seq.d/
XXXXXXXXXXTAATAATAATAATAATAATAATAATAATAATCGCTCCCATTTTAATCAAA
ACCCAGGCGAATATCAAAAAGTGATCAATCAATTAATTGATATTGTTTATATGAATCAAA
AAAAAACATTAAATAGTAAATTATAGTAAAAATTTTAAAATCACTAATTTAAGAAAATAA

---NNNNNNNNNNRSHFNQNPGEYQKVINQLIDIVYMNQKKTLNSKL**kf*nh*fkki

Frame A:
---NNNNNNNNNNRSHFNQNPGEYQKVINQLIDIVYMNQKKTLNSKL**kf*nh*fkki


Frame B:
---iiiiiiiiiiapiliktqanikk*sin*lilfi*ikkkh*ivnysknfkitnlrk*


Frame C:
---*********slpf*skprrisksdqsin*yclyeskknik**iivkilksli*en

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SSF506 (SSF506Q) /CSM/SS/SSF5-A/SSF506Q.Seq.d/                        222   1e-57
SSJ412 (SSJ412Q) /CSM/SS/SSJ4-A/SSJ412Q.Seq.d/                        202   1e-51
VHP607 (VHP607Q) /CSM/VH/VHP6-A/VHP607Q.Seq.d/                         42   0.003
VHK647 (VHK647Q) /CSM/VH/VHK6-B/VHK647Q.Seq.d/                         42   0.003
SSM552 (SSM552Q) /CSM/SS/SSM5-C/SSM552Q.Seq.d/                         42   0.003
SSI220 (SSI220Q) /CSM/SS/SSI2-A/SSI220Q.Seq.d/                         42   0.003
SSF422 (SSF422Q) /CSM/SS/SSF4-A/SSF422Q.Seq.d/                         42   0.003
SSA250 (SSA250Q) /CSM/SS/SSA2-C/SSA250Q.Seq.d/                         42   0.003
VHQ329 (VHQ329Q) /CSM/VH/VHQ3-B/VHQ329Q.Seq.d/                         36   0.17
VHQ168 (VHQ168Q) /CSM/VH/VHQ1-C/VHQ168Q.Seq.d/                         36   0.17

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

BH585254|BH585254.1 BOGZO48TR BOGZ Brassica oleracea genomic clone BOGZO48, genomicsurvey sequence.    40   0.002  2
BH660264|BH660264.1 BOHSP26TR BO_2_3_KB Brassica oleracea genomic clone BOHSP26, DNA sequence.    40   0.002  2
BH591817|BH591817.1 BOHGP48TR BOHG Brassica oleracea genomic clone BOHGP48, DNA sequence.    40   0.008  2
BZ039377|BZ039377.1 lka20d06.g1 B.oleracea002 Brassica oleracea genomic, DNA sequence.    40   0.008  2
BH691369|BH691369.1 BOMBF94TF BO_2_3_KB Brassica oleracea genomic clone BOMBF94, DNA sequence.    40   0.008  2
BH485954|BH485954.1 BOHAI31TF BOHA Brassica oleracea genomic clone BOHAI31, DNA sequence.    40   0.008  2
BH455493|BH455493.1 BOGPZ84TR BOGP Brassica oleracea genomic clone BOGPZ84, DNA sequence.    40   0.008  2
BH730400|BH730400.1 BOHWX09TR BO_2_3_KB Brassica oleracea genomic clone BOHWX09, DNA sequence.    40   0.008  2
BH536010|BH536010.1 BOGBX90TF BOGB Brassica oleracea genomic clone BOGBX90, DNA sequence.    40   0.008  2
BH248214|BH248214.1 BOGAC33TF BOGA Brassica oleracea genomic clone BOGAC33, DNA sequence.    40   0.008  2

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC116986_56(AC116986|pid:none) Dictyostelium discoideum chromoso...    35   0.63

 psg: 0.63  gvh: 0.06  alm: 0.56  top: 0.53  tms: 0.00  mit: 0.27  mip: 0.03
 nuc: 0.00  erl: 0.00  erm: 0.20  pox: 1.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 32.0 %: cytoplasmic
	 32.0 %: peroxisomal
	 20.0 %: mitochondrial
	 12.0 %: nuclear
	  4.0 %: cytoskeletal

>> prediction for SSF506 is cyt

>SSF506Z.Seq
----------TAATAATAATAATAATAATAATAATAATAATCGCTCCCATTTTAATCAAA
ACCCAGGCGAATATCAAAAAGTGATCAATCAATTAATTGATATTGTTTATATGAATCAAA
AAAAAACATTAAATAGTAAATTATAGTAAAAATTTTAAAATCACTAATTTAAGAAAATAA