>SSF439 (SSF439Q) /CSM/SS/SSF4-B/SSF439Q.Seq.d/
CTTTAGTTTCTTAAAGTAAAATTATAAATTAGATTAATCATGGGTGCAAAGGAACATTTC
ATGCCATCAGCAATTCCATCTTTGGAAAAGAATGTTATGATTATATGTGGTATTTTAGAT
TTCTTCTTTTTTGGTGTTGGTACAATTATTTTAGGTGCTCTCGATGACTGTAATGTTTGG
TGTGTTCTCATTGGTGTTTTACAATTATGTTTACCATTCGTTGGTTGGTTCTGGTCCATC
ATTTGGGGTGTTTTAATTCTCTTAAAAGCATTAGCTTAAATTATTATTATTATNATAAAC
TTCATTTACATATAATTACCTTAAACTCCATCATCTCTGTTTGTGATGGTTTTTTTTAAA
AAAAAAAAATAAAAAAAAAAAATAATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAXXXXXXXXXX

l*flkvkl*IRLIMGAKEHFMPSAIPSLEKNVMIICGILDFFFFGVGTIILGALDDCNVW
CVLIGVLQLCLPFVGWFWSIIWGVLILLKALA*iiiixinfiyi*lp*tpsslfvmvffk
kkk*kkkiikkkkkkkkkkkkkkkkkkkk---

Frame A:
l*flkvkl*IRLIMGAKEHFMPSAIPSLEKNVMIICGILDFFFFGVGTIILGALDDCNVW
CVLIGVLQLCLPFVGWFWSIIWGVLILLKALA*iiiixinfiyi*lp*tpsslfvmvffk
kkk*kkkiikkkkkkkkkkkkkkkkkkkk---


Frame B:
fsflk*nykld*swvqrnischqqfhlwkrml*lyvvf*issflvlvqlf*vlsmtvmfg
vfslvfynyvyhslvgsgpsfgvf*fs*kh*lkllllx*tsftynylklhhlcl*wfflk
kknkkkk**kkkkkkkkkkkkkkkkkkk---


Frame C:
lvs*skiin*inhgckgtfhaisnsifgkecydymwyfrfllfwcwynyfrcsr*l*clv
cshwcftimftirwlvlvhhlgcfnslksislnyyyyxklhlhiitlnsiisvcdgff*k
kkikkknnkkkkkkkkkkkkkkkkkkkk---

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

VSI547 (VSI547Q) /CSM/VS/VSI5-B/VSI547Q.Seq.d/                        702   0.0
VSH433 (VSH433Q) /CSM/VS/VSH4-B/VSH433Q.Seq.d/                        702   0.0
VSC836 (VSC836Q) /CSM/VS/VSC8-B/VSC836Q.Seq.d/                        702   0.0
VSA114 (VSA114Q) /CSM/VS/VSA1-A/VSA114Q.Seq.d/                        702   0.0
SSL126 (SSL126Q) /CSM/SS/SSL1-B/SSL126Q.Seq.d/                        702   0.0
SSF439 (SSF439Q) /CSM/SS/SSF4-B/SSF439Q.Seq.d/                        702   0.0
SSM183 (SSM183Q) /CSM/SS/SSM1-D/SSM183Q.Seq.d/                        686   0.0
SSD115 (SSD115Q) /CSM/SS/SSD1-A/SSD115Q.Seq.d/                        670   0.0
SSL285 (SSL285Q) /CSM/SS/SSL2-D/SSL285Q.Seq.d/                        272   4e-72
SFH542 (SFH542Q) /CSM/SF/SFH5-B/SFH542Q.Seq.d/                         40   0.029

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

BX901969|BX901969.1 Zebrafish DNA sequence *** SEQUENCING IN PROGRESS *** from clone CH211-148M9.    36   1e-04  8
AL929359|AL929359.1 Plasmodium falciparum strain 3D7, chromosome 9; segment 5/5.    36   2e-04  9
AE014845|AE014845.1 Plasmodium falciparum 3D7 chromosome 12, section 2 of 9 of the complete sequence.    40   0.001  9
CF469211|CF469211.1 P17F2 Plasmodium yoelli 17X axenic hepatic stages Plasmodium yoelii yoelii cDNA, mRNA sequence.    54   0.002  1
BG603650|BG603650.1 EST502740 Plasmodium yoelii sporozoite cDNA Plasmodium yoelii cDNA clone PYCDU05, mRNA sequence.    54   0.002  1
BG603654|BG603654.1 EST502744 Plasmodium yoelii sporozoite cDNA Plasmodium yoelii cDNA clone PYCDU10, mRNA sequence.    54   0.002  1
AC116305|AC116305.2 Dictyostelium discoideum chromosome 2 map 1005175-1418323 strain AX4, complete sequence.    36   0.002  5
AC116986|AC116986.2 Dictyostelium discoideum chromosome 2 map 2234041-2567370 strain AX4, complete sequence.    40   0.004  5
AB063522|AB063522.2 Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis DNA, complete genome, section 2/2.    34   0.004  11
AF466146|AF466146.1 Melipona bicolor mitochondrial genome, partial sequence.    32   0.005  5

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL008970_13(AL008970|pid:none) Plasmodium falciparum MAL3P4.  &A...    61   1e-08
AM910990_289(AM910990|pid:none) Plasmodium knowlesi strain H chr...    61   1e-08
(P16537) RecName: Full=Protein SPEC3;  &A43696(A43696)                 47   2e-04
CP000589_85(CP000589|pid:none) Ostreococcus lucimarinus CCE9901 ...    35   0.61
(Q0VBF8) RecName: Full=Uncharacterized membrane protein C1orf95 ...    35   0.61
BC134608_1(BC134608|pid:none) Bos taurus hypothetical LOC614962,...    35   0.79
(P0AAF1) RecName: Full=Putrescine-ornithine antiporter; AltName:...    35   0.79
CU928158_2329(CU928158|pid:none) Escherichia fergusonii ATCC 354...    35   0.79
CP000970_686(CP000970|pid:none) Escherichia coli SMS-3-5, comple...    35   0.79
CP000880_2159(CP000880|pid:none) Salmonella enterica subsp. ariz...    35   0.79

 psg: 0.89  gvh: 0.49  alm: 0.25  top: 0.47  tms: 0.20  mit: 0.24  mip: 0.02
 nuc: 0.00  erl: 0.00  erm: 0.40  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 1.00  m3b: 0.00  m_ : 0.00 

	 40.0 %: endoplasmic reticulum
	 16.0 %: mitochondrial
	 12.0 %: plasma membrane
	  8.0 %: extracellular, including cell wall
	  4.0 %: cytoplasmic
	  4.0 %: cytoskeletal
	  4.0 %: Golgi
	  4.0 %: vacuolar
	  4.0 %: vesicles of secretory system
	  4.0 %: nuclear

>> prediction for SSF439 is end

>SSF439F.Seq
CTTTAGTTTCTTAAAGTAAAATTATAAATTAGATTAATCATGGGTGCAAAGGAACATTTC
ATGCCATCAGCAATTCCATCTTTGGAAAAGAATGTTATGATTATATGTGGTATTTTAGAT
TTCTTCTTTTTTGGTGTTGGTACAATTATTTTAGGTGCTCTCGATGACTGTAATGTTTGG
TGTGTTCTCATTGGTGTTTTACAATTATGTTTACCATTCGTTGGTTGGTTCTGGTCCATC
ATTTGGGGTGTTTTAATTCTCTTAAAAGCATTAGCTTAAATTATTATTATTATNATAAAC
TTCATTTACATATAATTACCTTAAACTCCATCATCTCTGTTTGTGATGGTTTTTTTTAAA
AAAAAAAAATAAAAAAAAAAAATAATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAA----------