>SSD104 (SSD104Q) /CSM/SS/SSD1-A/SSD104Q.Seq.d/
TTTTTTTTTTTTTTTACAATTGTTTAGAAAATTAACAAAAAAAGAAATTAATGTGTTTTA
CAAACAAAGGTTGGATCACAATAATATTTTGGACATCCATTTGCTTCAGTTGCTCTGAAT
TGATCTAAACGATAACCTGCTGGACAAAGTGGCATACCCAAGGTACAGAATGAAGATTGA
GTGCAAGTTGGAGAAGCTAAACAACGATTTTCATTACGAGAGTATGTCATAATCGAACCA
CCTGGACATTTTAATAATGGCAATGAATCACATTTACCAATTGGATCTGGTAAATGAATG
AAAGCATTTGATATTGTAATTTTTCCACTACTGAATGTACCTTGACCGATTAAACCATAG
TCATCTGATCTAACTGTTTTAGATCCTAACCATGCAGAATCAAAATATTTACCAACGTTC
TTTGAATATGGCATGAGTATATCACTAACAGTTTGTTTAGTACGGATATTCAATAAAACT
GCATCTGTTGATGCACATGGGGTAGTGACACATCTGAC

ffffftiv*kinkkrn*cvlqtkvgsq*yfghpfasvaln*skr*pagqsgipkvqned*
vqvgeakqrfslreyviieppghfnngneshlpigsgk*mkafdivifpllnvp*pikp*
SSDLTVLDPNHAESKYLPTFFEYGMSISLTVCLVRIFNKTASVDAHGVVTHL

Frame A:
ffffftiv*kinkkrn*cvlqtkvgsq*yfghpfasvaln*skr*pagqsgipkvqned*
vqvgeakqrfslreyviieppghfnngneshlpigsgk*mkafdivifpllnvp*pikp*
SSDLTVLDPNHAESKYLPTFFEYGMSISLTVCLVRIFNKTASVDAHGVVTHL


Frame B:
fffflqlfrkltkkeinvfykqrldhnnildihllqll*idlndnlldkvaypryrmkie
ckleklnndfhyesms*snhldilimamnhiyqldlvne*khlil*ffhy*myldrlnhs
hli*lf*iltmqnqniyqrslnma*vyh*qfv*ygysiklhllmhmg**hi*


Frame C:
ffffynclen*qkkklmcftnkgwitiifwtsicfscseli*titcwtkwhtqgte*rls
aswrs*ttifitrvchnrttwtf**wq*itftnwiw*mnesi*ycnfsttectltd*tiv
i*sncfrs*pcrikiftnvl*iwheyitnslfstdiq*ncic*ctwgsdtsd

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SSM524 (SSM524Q) /CSM/SS/SSM5-A/SSM524Q.Seq.d/                        955   0.0
SSM411 (SSM411Q) /CSM/SS/SSM4-A/SSM411Q.Seq.d/                        955   0.0
SSM285 (SSM285Q) /CSM/SS/SSM2-D/SSM285Q.Seq.d/                        955   0.0
SSM240 (SSM240Q) /CSM/SS/SSM2-B/SSM240Q.Seq.d/                        955   0.0
SSK489 (SSK489Q) /CSM/SS/SSK4-D/SSK489Q.Seq.d/                        955   0.0
SSK447 (SSK447Q) /CSM/SS/SSK4-B/SSK447Q.Seq.d/                        955   0.0
SSJ893 (SSJ893Q) /CSM/SS/SSJ8-D/SSJ893Q.Seq.d/                        955   0.0
SSJ224 (SSJ224Q) /CSM/SS/SSJ2-A/SSJ224Q.Seq.d/                        955   0.0
SSI834 (SSI834Q) /CSM/SS/SSI8-B/SSI834Q.Seq.d/                        955   0.0
SSI294 (SSI294Q) /CSM/SS/SSI2-D/SSI294Q.Seq.d/                        955   0.0

                                                               Score     E
Sequences producing significant alignments:                    (bits)  Value  N

AC116305|AC116305.2 Dictyostelium discoideum chromosome 2 map 1005175-1418323 strain AX4, complete sequence.   942  0.0  5
AC106402|AC106402.4 Rattus norvegicus clone CH230-130H6, *** SEQUENCING IN PROGRESS ***, 5 unordered pieces.    40  0.075  2
AL109748|AL109748.2 Homo sapiens chromosome 21 PAC RPCIP704M13256Q2.    48  0.11  1
AC099401|AC099401.2 Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1134F05, complete sequence.    46  0.42  1
AK067149|AK067149.1 Oryza sativa (japonica cultivar-group) cDNA clone:J013097G10, full insert sequence.    46  0.42  1
AL050303|AL050303.4 Homo sapiens chromosome 21 PAC RPCIP704G14214Q2.    48  0.86  2
BX255277|BX255277.5 Mouse DNA sequence from clone RP23-478B14 on chromosome 11.    40  0.88  2
AC124501|AC124501.3 Mus musculus chromosome 6 clone RP23-412F10, complete sequence.    44  1.7  1
AC092100|AC092100.5 Homo sapiens BAC clone RP11-666G4 from 7, complete sequence.    44  1.7  1
AZ126336|AZ126336.1 OSJNBb0076L02f CUGI Rice BAC Library (EcoRI) Oryza sativa genomic clone OSJNBb0076L02f, genomic survey sequence.    44  1.7  1

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC116305_115(AC116305|pid:none) Dictyostelium discoideum chromos...   326   2e-88
AC116305_114(AC116305|pid:none) Dictyostelium discoideum chromos...   197   2e-49
AC116305_112(AC116305|pid:none) Dictyostelium discoideum chromos...   136   3e-31
AC116921_3(AC116921|pid:none) Dictyostelium discoideum chromosom...    78   1e-13
BC101017_1(BC101017|pid:none) Homo sapiens chromosome 12 open re...    43   0.004
AL033501_6(AL033501|pid:none) C.albicans cosmid Ca41C10.  &T1823...    37   0.29
FM992688_766(FM992688|pid:none) Candida dubliniensis CD36 chromo...    35   1.1
CP001037_1830(CP001037|pid:none) Nostoc punctiforme PCC 73102, c...    34   1.9
AE000666_396(AE000666|pid:none) Methanothermobacter thermautotro...    34   2.5
AJ311906_1(AJ311906|pid:none) Mus musculus mRNA for Muc5b protein.     34   2.5

 psg: 0.75  gvh: 0.40  alm: 0.39  top: 0.53  tms: 0.00  mit: 0.25  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 56.0 %: cytoplasmic
	 32.0 %: nuclear
	  4.0 %: cytoskeletal
	  4.0 %: mitochondrial
	  4.0 %: vesicles of secretory system

>> prediction for SSD104 is cyt

>SSD104E.Seq
TTTTTTTTTTTTTTTACAATTGTTTAGAAAATTAACAAAAAAAGAAATTAATGTGTTTTA
CAAACAAAGGTTGGATCACAATAATATTTTGGACATCCATTTGCTTCAGTTGCTCTGAAT
TGATCTAAACGATAACCTGCTGGACAAAGTGGCATACCCAAGGTACAGAATGAAGATTGA
GTGCAAGTTGGAGAAGCTAAACAACGATTTTCATTACGAGAGTATGTCATAATCGAACCA
CCTGGACATTTTAATAATGGCAATGAATCACATTTACCAATTGGATCTGGTAAATGAATG
AAAGCATTTGATATTGTAATTTTTCCACTACTGAATGTACCTTGACCGATTAAACCATAG
TCATCTGATCTAACTGTTTTAGATCCTAACCATGCAGAATCAAAATATTTACCAACGTTC
TTTGAATATGGCATGAGTATATCACTAACAGTTTGTTTAGTACGGATATTCAATAAAACT
GCATCTGTTGATGCACATGGGGTAGTGACACATCTGAC