>SSC707 (SSC707Q) /CSM/SS/SSC7-A/SSC707Q.Seq.d/
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATTTATTTATTTATTAATTCACATATATA
TAATAATATTTATTAATATATATNNNNATATACACACACACACACGCGCTTTTAGTAATT
TTTTCAAATAATATTTTTTTATTTATTATATACATAATTTATCCTCATTTCCTATATATA
CATAATTTTCAAATAAAATGAAGAGAGGCGTTGCATTTTTAAGTTTATTCATGTGCTTNG
TTGTTATAGCNTGTTGTATTGTTTCGATTGTTTATCCATGGTATATCGTTTCATTTAAAA
AAATTGGCTCAGAAGATAGAGTCAAGTATTTATACTATTGGGATGAAATAAGAAATACTG
ATGAAAAATTAAATGCTACAAATATTATAAATACAAGTAGTAATTCTGATTCAGAGAAAT
ATGATGATTTGGGATATGATCATATAAAGAACGTTTTCATAGTTTCANTTGCATTTTTAT
GTCTAGCAACATTATTAGCTTTAATTAGTGCCGTAGTGATTTTAATTGCATTCTTGGCAA
AGAATAGAATTTGCGCTAAAGTTGCCGGTGTTTTCATGATCATTGTAATGATTTTGTTAT
TAGTTTCATTTTTCCAATTCTTTAGAATCAATGGAGCATTCCGTGAAGATGATCCATTAT
GTAATGGTAATCCAGTTGCATCTTGGATTAGTTCATTGTTTGTTGGTGATGCCGATGATA
CXXXXXXXXXX

kkkkkkkkkkfiyllihiyiiifiniyxxihthtrafsnffk*yffiyyihnlssfpiyt
*FSNKMKRGVAFLSLFMCXVVIACCIVSIVYPWYIVSFKKIGSEDRVKYLYYWDEIRNTD
EKLNATNIINTSSNSDSEKYDDLGYDHIKNVFIVSXAFLCLATLLALISAVVILIAFLAK
NRICAKVAGVFMIIVMILLLVSFFQFFRINGAFREDDPLCNGNPVASWISSLFVGDADD-
--

Frame A:
kkkkkkkkkknlfiy*ftyi**ylliyxxiyththallvifsnniflfiiyiiyphflyi
hnfqik*realhf*vyscaxll*xvvlfrlfihgisfhlkklaqkiessiytigmk*eil
mkn*mlqil*iqvviliqrnmmiwdmii*rtfs*fxlhfyv*qhy*l*lvp**f*lhswq
riefalklpvfs*sl**fcy*fhfsnslesmehsvkmihyvmviqlhlglvhcllvmpmi
---


Frame B:
kkkkkkkkkkiylfinshiynniy*yixxyththtrf**ffqiiffyllyt*filisyiy
iifk*neerrcifkfihvlxcysxlycfdclsmvyrfi*knwlrr*sqvfillg*nkky*
*kikcykyykyk**f*frei**fgi*sykerfhsfxcifmssniisfn*crsdfncilgk
e*nlr*scrcfhdhcndfvisfifpil*nqwsip*r*sim*w*sscild*fivcw*cr*-
--


Frame C:
kkkkkkkkkkfiyllihiyiiifiniyxxihthtrafsnffk*yffiyyihnlssfpiyt
*FSNKMKRGVAFLSLFMCXVVIACCIVSIVYPWYIVSFKKIGSEDRVKYLYYWDEIRNTD
EKLNATNIINTSSNSDSEKYDDLGYDHIKNVFIVSXAFLCLATLLALISAVVILIAFLAK
NRICAKVAGVFMIIVMILLLVSFFQFFRINGAFREDDPLCNGNPVASWISSLFVGDADD-
--

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SSC707 (SSC707Q) /CSM/SS/SSC7-A/SSC707Q.Seq.d/                        995   0.0
SSB742 (SSB742Q) /CSM/SS/SSB7-B/SSB742Q.Seq.d/                        817   0.0
SSF656 (SSF656Q) /CSM/SS/SSF6-C/SSF656Q.Seq.d/                        787   0.0
SSM281 (SSM281Q) /CSM/SS/SSM2-D/SSM281Q.Seq.d/                        749   0.0
SSD417 (SSD417Q) /CSM/SS/SSD4-A/SSD417Q.Seq.d/                        749   0.0
SSF520 (SSF520Q) /CSM/SS/SSF5-A/SSF520Q.Seq.d/                        662   0.0
SSK394 (SSK394Q) /CSM/SS/SSK3-D/SSK394Q.Seq.d/                        622   e-177
SSL870 (SSL870Q) /CSM/SS/SSL8-C/SSL870Q.Seq.d/                        553   e-156
SSB102 (SSB102Q) /CSM/SS/SSB1-A/SSB102Q.Seq.d/                        539   e-152
SSG126 (SSG126Q) /CSM/SS/SSG1-B/SSG126Q.Seq.d/                        502   e-141

                                                               Score     E
Sequences producing significant alignments:                    (bits)  Value  N

AL844509|AL844509.1 Plasmodium falciparum chromosome 13.          44  0.40  9
AZ498960|AZ498960.1 1M0336B03R Mouse 10kb plasmid UUGC1M library Mus musculus genomic clone UUGC1M0336B03 R, DNA sequence.    36  0.53  2
BZ461478|BZ461478.1 BOOAQ64TF BO_1.6_2_KB_tot Brassica oleracea genomic clone BOOAQ64, DNA sequence.    46  0.60  1
AL049180|AL049180.3 Plasmodium falciparum DNA *** SEQUENCING IN PROGRESS *** from  MAL13P1.    44  2.4  1
AC107306|AC107306.3 Homo sapiens chromosome 12 clone RP11-646F20, WORKING DRAFT SEQUENCE, 52 unordered pieces.    44  2.4  1
AC132858|AC132858.4 Mus musculus clone RP23-116J1, WORKING DRAFT SEQUENCE, 5 unordered pieces.    44  2.4  1
AC013275|AC013275.8 Homo sapiens BAC clone RP11-464C8 from 2, complete sequence.    44  2.4  1
AC016076|AC016076.4 Homo sapiens clone RP11-713O9, WORKING DRAFT SEQUENCE, 20 unordered pieces.    44  2.4  1
AL845446|AL845446.7 Human DNA sequence from clone XXbac-79P13 on chromosome 6.    44  2.4  1
AC133901|AC133901.3 Mus musculus clone RP24-536H19, WORKING DRAFT SEQUENCE, 5 unordered pieces.    44  2.4  1

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014188_101(AE014188|pid:none) Plasmodium falciparum 3D7 chromo...    33   6.8

 psg: 0.97  gvh: 0.69  alm: 0.13  top: 0.40  tms: 0.13  mit: 0.39  mip: 0.03
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 1.00  m3b: 0.00  m_ : 0.00 

	 36.0 %: endoplasmic reticulum
	 32.0 %: mitochondrial
	 12.0 %: plasma membrane
	  8.0 %: extracellular, including cell wall
	  4.0 %: Golgi
	  4.0 %: vacuolar
	  4.0 %: vesicles of secretory system

>> prediction for SSC707 is end

>SSC707F.Seq
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATTTATTTATTTATTAATTCACATATATA
TAATAATATTTATTAATATATATNNNNATATACACACACACACACGCGCTTTTAGTAATT
TTTTCAAATAATATTTTTTTATTTATTATATACATAATTTATCCTCATTTCCTATATATA
CATAATTTTCAAATAAAATGAAGAGAGGCGTTGCATTTTTAAGTTTATTCATGTGCTTNG
TTGTTATAGCNTGTTGTATTGTTTCGATTGTTTATCCATGGTATATCGTTTCATTTAAAA
AAATTGGCTCAGAAGATAGAGTCAAGTATTTATACTATTGGGATGAAATAAGAAATACTG
ATGAAAAATTAAATGCTACAAATATTATAAATACAAGTAGTAATTCTGATTCAGAGAAAT
ATGATGATTTGGGATATGATCATATAAAGAACGTTTTCATAGTTTCANTTGCATTTTTAT
GTCTAGCAACATTATTAGCTTTAATTAGTGCCGTAGTGATTTTAATTGCATTCTTGGCAA
AGAATAGAATTTGCGCTAAAGTTGCCGGTGTTTTCATGATCATTGTAATGATTTTGTTAT
TAGTTTCATTTTTCCAATTCTTTAGAATCAATGGAGCATTCCGTGAAGATGATCCATTAT
GTAATGGTAATCCAGTTGCATCTTGGATTAGTTCATTGTTTGTTGGTGATGCCGATGATA
C----------