>SSC272 (SSC272Q) /CSM/SS/SSC2-C/SSC272Q.Seq.d/
XXXXXXXXXXTTTTCAGTATTGGTACAATCTGAAACAGCCTATTTTGGTTTAAAAACCCA
TGGTGACCATAATGATTTTATTTTCAAATTAACAGATTCAGAAAAAATTAAAAAAGCCAG
AGATATTTTGTCTGGAAAGGAAACCAATGAAGTTCATGTAATGGGTAGAATTAGAAAGAG
ACCTGAAAGCTATAATCCAAAGTATTCCTTTATTCTTGACCCAGATACAATCACATTTTT
TTCCATGGCTATTGAAGTTTGTGATGCTTCAACTATTTATGTAGAAGATCACCTTGATGA
GGCCTGTGGTGCTTTCCTCCCAGGTTGCTTCTGGTGCCCATGGTCTTCAAAACTAACATG
NGAAATTAAAATTTAAACTATAAGAGTAAAATTAAATTACTCATGATTAAATTTAATCAA
ATTAAATACTTAAATATTTAATAATAAAGTTTATTAAACAAAAGTTTTTATAAAAAAA

---SVLVQSETAYFGLKTHGDHNDFIFKLTDSEKIKKARDILSGKETNEVHVMGRIRKRP
ESYNPKYSFILDPDTITFFSMAIEVCDASTIYVEDHLDEACGAFLPGCFWCPWSSKLTXE
IKI*tirvklnys*lnliklnt*ifnnkvy*tkvfikk

Frame A:
---fqywynlkqpilv*kpmvtimilfsn*qiqkklkkpeifclerkpmkfm*wvelerd
lkaiiqsiplfltqiqshffpwllkfvmlqlfm*kitlmrpvvlssqvasgahglqn*hx
klkfkl*e*n*ithd*i*sn*ilkyliikfikqkfl*k


Frame B:
---fsigti*nslfwfknpw*p**fyfqinrfrkn*ksqryfvwkgnq*sscng*n*ket
*kl*skvflys*prynhiffhgy*sl*cfnylcrrsp**glwcfpprlllvpmvfktnmx
n*nlnykskikllmikfnqikylni***sllnksfykk


Frame C:
---SVLVQSETAYFGLKTHGDHNDFIFKLTDSEKIKKARDILSGKETNEVHVMGRIRKRP
ESYNPKYSFILDPDTITFFSMAIEVCDASTIYVEDHLDEACGAFLPGCFWCPWSSKLTXE
IKI*tirvklnys*lnliklnt*ifnnkvy*tkvfikk

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SSC272 (SSC272Q) /CSM/SS/SSC2-C/SSC272Q.Seq.d/                        525   e-148
SSM239 (SSM239Q) /CSM/SS/SSM2-B/SSM239Q.Seq.d/                        517   e-146
SSK842 (SSK842Q) /CSM/SS/SSK8-B/SSK842Q.Seq.d/                        517   e-146
SSK637 (SSK637Q) /CSM/SS/SSK6-B/SSK637Q.Seq.d/                        517   e-146
SSK558 (SSK558Q) /CSM/SS/SSK5-C/SSK558Q.Seq.d/                        517   e-146
SSJ755 (SSJ755Q) /CSM/SS/SSJ7-C/SSJ755Q.Seq.d/                        517   e-146
SSI859 (SSI859Q) /CSM/SS/SSI8-C/SSI859Q.Seq.d/                        517   e-146
SSI820 (SSI820Q) /CSM/SS/SSI8-A/SSI820Q.Seq.d/                        517   e-146
SSI577 (SSI577Q) /CSM/SS/SSI5-D/SSI577Q.Seq.d/                        517   e-146
SSI140 (SSI140Q) /CSM/SS/SSI1-B/SSI140Q.Seq.d/                        517   e-146

                                                               Score     E
Sequences producing significant alignments:                    (bits)  Value  N

AF140044|AF140044.1 Dictyostelium discoideum putative calmodulin-binding protein CaM-BP15 mRNA, complete cds.   291  e-177  3
AC115604|AC115604.2 Dictyostelium discoideum chromosome 2 map 4354771-4414991 strain AX4, complete sequence.   109  3e-81  8
AC125803|AC125803.4 Rattus norvegicus clone CH230-8M13, WORKING DRAFT SEQUENCE, 1 ordered piece.    46  0.39  1
AC094380|AC094380.6 Rattus norvegicus clone CH230-3P6, *** SEQUENCING IN PROGRESS ***, 7 unordered pieces.    46  0.39  1
AC131992|AC131992.3 Mus musculus clone RP24-190B16, WORKING DRAFT SEQUENCE, 23 unordered pieces.    44  1.5  1
CA328604|CA328604.1 UI-M-FY0-cda-c-20-0-UI.r1 NIH_BMAP_FY0 Mus musculus cDNA clone IMAGE:6826797 5', mRNA sequence.    44  1.5  1
AC136678|AC136678.2 Rattus norvegicus clone CH230-16I19, WORKING DRAFT SEQUENCE, 1 ordered piece.    44  1.5  1
AC117826|AC117826.3 Mus musculus clone RP24-81K19, WORKING DRAFT SEQUENCE, 13 unordered pieces.    44  1.5  1
AC096079|AC096079.6 Rattus norvegicus clone CH230-33I23, *** SEQUENCING IN PROGRESS ***, 6 unordered pieces.    44  1.5  1
AC137010|AC137010.1 Rattus norvegicus clone CH230-unknown, WORKING DRAFT SEQUENCE, 2 unordered pieces.    44  1.5  1

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF140044_1(AF140044|pid:none) Dictyostelium discoideum putative ...   241   6e-63
CP000113_2102(CP000113|pid:none) Myxococcus xanthus DK 1622, com...   139   3e-32
CP000155_1080(CP000155|pid:none) Hahella chejuensis KCTC 2396, c...   127   1e-28
AC115604_1(AC115604|pid:none) Dictyostelium discoideum chromosom...    46   4e-04
CP001618_2965(CP001618|pid:none) Beutenbergia cavernae DSM 12333...    43   0.003
AF080118_11(AF080118|pid:none) Arabidopsis thaliana BAC F8M12.  ...    33   2.4
CP001184_633(CP001184|pid:none) Ureaplasma urealyticum serovar 1...    33   3.2
EF611243_1(EF611243|pid:none) Plum pox virus isolate Penn3 polyp...    32   7.1

 psg: 0.75  gvh: 0.24  alm: 0.41  top: 0.53  tms: 0.00  mit: 0.16  mip: 0.00
 nuc: 0.03  erl: 0.00  erm: 0.20  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 48.0 %: cytoplasmic
	 28.0 %: nuclear
	 16.0 %: cytoskeletal
	  4.0 %: mitochondrial
	  4.0 %: vacuolar

>> prediction for SSC272 is cyt

>SSC272Z.Seq
----------TTTTCAGTATTGGTACAATCTGAAACAGCCTATTTTGGTTTAAAAACCCA
TGGTGACCATAATGATTTTATTTTCAAATTAACAGATTCAGAAAAAATTAAAAAAGCCAG
AGATATTTTGTCTGGAAAGGAAACCAATGAAGTTCATGTAATGGGTAGAATTAGAAAGAG
ACCTGAAAGCTATAATCCAAAGTATTCCTTTATTCTTGACCCAGATACAATCACATTTTT
TTCCATGGCTATTGAAGTTTGTGATGCTTCAACTATTTATGTAGAAGATCACCTTGATGA
GGCCTGTGGTGCTTTCCTCCCAGGTTGCTTCTGGTGCCCATGGTCTTCAAAACTAACATG
NGAAATTAAAATTTAAACTATAAGAGTAAAATTAAATTACTCATGATTAAATTTAATCAA
ATTAAATACTTAAATATTTAATAATAAAGTTTATTAAACAAAAGTTTTTATAAAAAAA