>SSC219 (SSC219Q) /CSM/SS/SSC2-A/SSC219Q.Seq.d/
XXXXXXXXXXTTGCAAGTGCCGCAGACCAATTAAAATATTCAATTATTTTTAGAAATATG
AATGGTACAATAGCAAATAAAGGAAGTGTTAGAATTGATATGCAAAGCTCTTTCACAAGT
AATGGTCCAGTGTGGCTCGACTTGAAAGCCCAATTAAATGGNGTCAAAGGAAATTCAACA
ATTGCTCATGTTATAGTTGATGGCAATACAATCACTGGTATTGGTGCTGAACAAGTCAGT
GTTACTAATATCACTATTGTTGCTATGATGAATTCATATGCCTCTGGAAAAACCTGCAAT
GTTTTTGAAAATGGTCTTTAAACTGGTTATAAAAAACAAAAAAAAAAAAAACAGAATGAT
TACATTCATTTTTTTTNTTTTATATCATTTTGTGTATTTTGATTACTCTATATTTATGTT
ATTTTATTCACTAAAAAAAAATTCCATTATTTTTTTTAGAAAA

---ASAADQLKYSIIFRNMNGTIANKGSVRIDMQSSFTSNGPVWLDLKAQLNGVKGNSTI
AHVIVDGNTITGIGAEQVSVTNITIVAMMNSYASGKTCNVFENGL*tgykkqkkkkqndy
ihffxfisfcvf*llyiyvilftkkkfhyff*k

Frame A:
---ckcrrpikifnyf*kyewynsk*rkc*n*yaklfhk*wssvarlespikwxqrkfnn
cscys*wqynhwywc*tsqcy*yhyccydeficlwknlqcf*kwslnwl*ktkkkkte*l
hsffxfyiilcilitlylcyfih*kkiplffle


Frame B:
---ASAADQLKYSIIFRNMNGTIANKGSVRIDMQSSFTSNGPVWLDLKAQLNGVKGNSTI
AHVIVDGNTITGIGAEQVSVTNITIVAMMNSYASGKTCNVFENGL*tgykkqkkkkqndy
ihffxfisfcvf*llyiyvilftkkkfhyff*k


Frame C:
---qvpqtn*niqlflei*mvq*qikevlelickalsqvmvqcgst*kpn*mxskeiqql
lml*lmaiqslvlvlnksvllisllll**ihmplekpamflkmvfklviknkkkknrmit
fiffxlyhfvyfdysifmlfyslkknsiiffrk

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SSC219 (SSC219Q) /CSM/SS/SSC2-A/SSC219Q.Seq.d/                        628   e-179
SSA222 (SSA222Q) /CSM/SS/SSA2-A/SSA222Q.Seq.d/                        620   e-177
SSD612 (SSD612Q) /CSM/SS/SSD6-A/SSD612Q.Seq.d/                        583   e-166
VHE682 (VHE682Q) /CSM/VH/VHE6-D/VHE682Q.Seq.d/                         46   5e-04
CHJ164 (CHJ164Q) /CSM/CH/CHJ1-C/CHJ164Q.Seq.d/                         40   0.029
VFH238 (VFH238Q) /CSM/VF/VFH2-B/VFH238Q.Seq.d/                         36   0.45
VFG757 (VFG757Q) /CSM/VF/VFG7-C/VFG757Q.Seq.d/                         36   0.45
VFG711 (VFG711Q) /CSM/VF/VFG7-A/VFG711Q.Seq.d/                         36   0.45
VFA537 (VFA537Q) /CSM/VF/VFA5-B/VFA537Q.Seq.d/                         36   0.45
VSE332 (VSE332Q) /CSM/VS/VSE3-B/VSE332Q.Seq.d/                         34   1.8

                                                               Score     E
Sequences producing significant alignments:                    (bits)  Value  N

AC116984|AC116984.2 Dictyostelium discoideum chromosome 2 map 2567470-3108875 strain AX4, complete sequence.    46  0.001  8
AC116306|AC116306.2 Dictyostelium discoideum chromosome 2 map 1004546-1005075 strain AX4, complete sequence.    42  0.051  2
AC116955|AC116955.2 Dictyostelium discoideum chromosome 2 map 5455881-5481449 strain AX4, complete sequence.    46  0.054  3
AC114261|AC114261.2 Dictyostelium discoideum chromosome 2 map 126059-159710 strain AX4, complete sequence.    46  0.37  1
AC006278|AC006278.8 Plasmodium falciparum chromosome 12 clone 3D7, *** SEQUENCING IN PROGRESS ***, 4 unordered pieces.    38  0.48  6
AC096740|AC096740.3 Homo sapiens BAC clone RP11-326O23 from 4, complete sequence.    42  0.50  3
AX392735|AX392735.1 Sequence 25 from Patent WO0212526.            30  0.75  9
AC115607|AC115607.2 Dictyostelium discoideum chromosome 2 map 4559693-4624405 strain AX4, complete sequence.    46  0.90  5
AE014846|AE014846.1 Plasmodium falciparum 3D7 chromosome 12, section 3 of 9 of the complete sequence.    40  0.93  4
AC108845|AC108845.4 Mus musculus clone RP23-425C23, WORKING DRAFT SEQUENCE, 8 ordered pieces.    44  1.5  1

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

(O96042) RecName: Full=Differentiation-associated protein 2;    ...    41   0.011
AE015924_81(AE015924|pid:none) Porphyromonas gingivalis W83, com...    33   3.0
AP009380_2038(AP009380|pid:none) Porphyromonas gingivalis ATCC 3...    33   3.0
CP001087_4452(CP001087|pid:none) Desulfobacterium autotrophicum ...    33   3.9
CY040585_1(CY040585|pid:none) Influenza A virus (A/swine/Missour...    33   3.9
CP000903_755(CP000903|pid:none) Bacillus weihenstephanensis KBAB...    33   3.9
AJ301644_2(AJ301644|pid:none) Thryonomys swinderianus complete m...    33   3.9
CR382127_179(CR382127|pid:none) Yarrowia lipolytica strain CLIB1...    32   5.1
CP000572_3816(CP000572|pid:none) Burkholderia pseudomallei 1106a...    32   5.1
EU107946_1(EU107946|pid:none) Anolis garmani isolate 11Agarm3213...    32   5.1

 psg: 0.71  gvh: 0.43  alm: 0.42  top: 0.53  tms: 0.00  mit: 0.27  mip: 0.06
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 44.0 %: cytoplasmic
	 36.0 %: nuclear
	 12.0 %: mitochondrial
	  4.0 %: cytoskeletal
	  4.0 %: vesicles of secretory system

>> prediction for SSC219 is cyt

>SSC219Z.Seq
----------TTGCAAGTGCCGCAGACCAATTAAAATATTCAATTATTTTTAGAAATATG
AATGGTACAATAGCAAATAAAGGAAGTGTTAGAATTGATATGCAAAGCTCTTTCACAAGT
AATGGTCCAGTGTGGCTCGACTTGAAAGCCCAATTAAATGGNGTCAAAGGAAATTCAACA
ATTGCTCATGTTATAGTTGATGGCAATACAATCACTGGTATTGGTGCTGAACAAGTCAGT
GTTACTAATATCACTATTGTTGCTATGATGAATTCATATGCCTCTGGAAAAACCTGCAAT
GTTTTTGAAAATGGTCTTTAAACTGGTTATAAAAAACAAAAAAAAAAAAAACAGAATGAT
TACATTCATTTTTTTTNTTTTATATCATTTTGTGTATTTTGATTACTCTATATTTATGTT
ATTTTATTCACTAAAAAAAAATTCCATTATTTTTTTTAGAAAA