>SSC185 (SSC185Q) /CSM/SS/SSC1-D/SSC185Q.Seq.d/
GAAAACACAAAACTATTATTTTTAGTTTTTTTTATTTTTATTTTTATTATTTTTCAAACA
AATAATAATAATAATAATAATAATAATAATAATAATAATAATAANATTATTATAATTTTA
TAATTATTTTTTAAAAATTAATAGATTAATTAANAGATCTTTCACTGGTACTGTTAATAT
TAATAATAGTAAATTTTTAAATTTTAAXXXXXXXXXX

ENTKLLFLVFFIFIFIIFQTNNNNNNNNNNNNNNXIIIIL*lffkn**in*xifhwyc*y
****ifkf---

Frame A:
ENTKLLFLVFFIFIFIIFQTNNNNNNNNNNNNNNXIIIIL*lffkn**in*xifhwyc*y
****ifkf---


Frame B:
ktqnyyf*fflflfllffkqiiiiiiiiiiiiiixll*fynyflkinrlixrsftgtvni
nnskflnf---


Frame C:
khktiifsffyfyfyyfsnk**************xyynfiiif*klid*lxdlslvllil
iivnf*il---

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SSC185 (SSC185Q) /CSM/SS/SSC1-D/SSC185Q.Seq.d/                        103   1e-21
SSC795 (SSC795Q) /CSM/SS/SSC7-D/SSC795Q.Seq.d/                         96   3e-19
AFM493 (AFM493Q) /CSM/AF/AFM4-D/AFM493Q.Seq.d/                         96   3e-19
AFI790 (AFI790Q) /CSM/AF/AFI7-D/AFI790Q.Seq.d/                         96   3e-19
VSB866 (VSB866Q) /CSM/VS/VSB8-C/VSB866Q.Seq.d/                         36   0.20
VSA707 (VSA707Q) /CSM/VS/VSA7-A/VSA707Q.Seq.d/                         36   0.20
VSA145 (VSA145Q) /CSM/VS/VSA1-B/VSA145Q.Seq.d/                         36   0.20
SSL220 (SSL220Q) /CSM/SS/SSL2-A/SSL220Q.Seq.d/                         36   0.20
SSI845 (SSI845Q) /CSM/SS/SSI8-B/SSI845Q.Seq.d/                         36   0.20
SSA195 (SSA195Q) /CSM/SS/SSA1-D/SSA195Q.Seq.d/                         36   0.20

                                                               Score     E
Sequences producing significant alignments:                    (bits)  Value  N

AC116984|AC116984.2 Dictyostelium discoideum chromosome 2 map 2567470-3108875 strain AX4, complete sequence.    96  6e-15  2
AB028611|AB028611.1 Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone:MFE16.    44  0.65  1
AJ011856|AJ011856.1 Saccharomyces cerevisiae complete mitochondrial genome.    44  0.65  1
AL122035|AL122035.6 Human chromosome 14 DNA sequence BAC C-2555O16 of library CalTech-D  from chromosome 14 of Homo sapiens (Human).    44  0.65  1
AL161756|AL161756.6 Human chromosome 14 DNA sequence BAC R-712C19 of library RPCI-11  from chromosome 14 of Homo sapiens (Human).    44  1.8  3
AC105369|AC105369.2 Sus scrofa clone RP44-348N16, WORKING DRAFT SEQUENCE, 6 ordered pieces.    44  2.2  2
AC097937|AC097937.6 Rattus norvegicus clone CH230-52O24, *** SEQUENCING IN PROGRESS ***, 2 unordered pieces.    36  2.5  2
AZ672421|AZ672421.1 ENTJO58TR Entamoeba histolytica Sheared DNA Entamoeba histolytica genomic, DNA sequence.    42  2.6  1
CB089091|CB089091.1 if09f12.b1 Cycas sporophyll (w/o ovule) (NYBG) Cycas rumphii cDNA clone if09f12, mRNA sequence.    42  2.6  1
AE003695|AE003695.2 Drosophila melanogaster chromosome 3R, section 33 of 118 of the complete sequence.    42  2.6  1

 ***** No hits found ******

Lambda     K      H
   0.318    0.134    0.401

Gapped
Lambda     K      H
   0.267   0.0410    0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3159261
Number of Hits to DB: 59,797,937

 psg: 1.04  gvh: 0.50  alm: 0.21  top: 0.47  tms: 0.07  mit: 0.29  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 1.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 1.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 0.00 

	 28.0 %: endoplasmic reticulum
	 24.0 %: nuclear
	 16.0 %: cytoplasmic
	 12.0 %: mitochondrial
	  8.0 %: plasma membrane
	  4.0 %: Golgi
	  4.0 %: vesicles of secretory system
	  4.0 %: extracellular, including cell wall

>> prediction for SSC185 is end

>SSC185F.Seq
GAAAACACAAAACTATTATTTTTAGTTTTTTTTATTTTTATTTTTATTATTTTTCAAACA
AATAATAATAATAATAATAATAATAATAATAATAATAATAATAANATTATTATAATTTTA
TAATTATTTTTTAAAAATTAATAGATTAATTAANAGATCTTTCACTGGTACTGTTAATAT
TAATAATAGTAAATTTTTAAATTTTAA----------