>SSB376 (SSB376Q) /CSM/SS/SSB3-D/SSB376Q.Seq.d/
AAAAACTTATAACAATAATTCATTTAAATAAATAAAAGTTATTTAAATAAAAACTTCAAA
TTATATATTCAATTTTTTCCCAATATTTATTTTTAGAAATTCTTTAAAAATAAATATTTT
ATTATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAXXXXXXXXXX

ktynnnsfk*ikvi*IKTSNYIFNFFPIFIFRNSLKINILL*kkkkkkkkk---

Frame A:
knl*q*fi*inksylnknfklyiqffpniyf*kffknkyfiikkkkkkkkk---


Frame B:
ktynnnsfk*ikvi*IKTSNYIFNFFPIFIFRNSLKINILL*kkkkkkkkk---


Frame C:
klitiihlnk*klfk*klqiiysifsqylfleil*k*ifyykkkkkkkkk---

 ***** No hits found ******

Lambda     K      H
    1.37    0.711     1.31

Gapped
Lambda     K      H
    1.37    0.711     1.31

Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 0
Number of Sequences: 97611
Number of extensions: 0
Number of successful extensions: 0
Number of sequences better than 10.0: 0
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 0
length of query: 165
length of database: 80,480,566
effective HSP length: 17
effective length of query: 148
effective length of database: 78,821,179
effective search space: 11665534492
effective search space used: 11665534492
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)

 ***** No hits found ******

Lambda     K      H
    1.37    0.711     1.31

[blastall] WARNING:  [000.000]  SetUpBlastSearch failed.
[blastall] ERROR:  [000.000]  Blast: No valid letters to be indexed

ANTI-DNA BLAST search was processed by blast@nig.ac.jp, National Institute of Genetics, Japan.

 ***** No hits found ******

Lambda     K      H
   0.318    0.134    0.401

Gapped
Lambda     K      H
   0.267   0.0410    0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3159261
Number of Hits to DB: 130,288,207

 psg: 0.92  gvh: 0.24  alm: 0.39  top: 0.53  tms: 0.00  mit: 0.44  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 32.0 %: mitochondrial
	 28.0 %: cytoplasmic
	 28.0 %: nuclear
	  4.0 %: cytoskeletal
	  4.0 %: plasma membrane
	  4.0 %: peroxisomal

>> prediction for SSB376 is mit

>SSB376F.Seq
AAAAACTTATAACAATAATTCATTTAAATAAATAAAAGTTATTTAAATAAAAACTTCAAA
TTATATATTCAATTTTTTCCCAATATTTATTTTTAGAAATTCTTTAAAAATAAATATTTT
ATTATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA----------