>SSB273 (SSB273Q) /CSM/SS/SSB2-D/SSB273Q.Seq.d/
AAAAAAATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACTTTTTTCAAAAATAA
AAATACACATACATAAATAAAAAATATATTAGTAATATAAAAAAAAAAAAAAAAAAAAAT
TXXXXXXXXXXTAAAAAATTNTTNGTTNTGNTTTTTTTTTTTTTTTTTCCCCCAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAACNNCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAA

kkikkkkkkkkkkknffqk*KYTYINKKYISNIKKKKKKN---

---KKXXVXXFFFFFPPKKKKKKKKKKXQKKKKKKKKKKKKKKKKK

Frame A:
kkikkkkkkkkkkknffqk*KYTYINKKYISNIKKKKKKN---

---*kixxxxfffffspkkkkkkkkkktxkkkkkkkkkkkkkkkkk

Frame B:
kk*kkkkkkkkkkktffknkntht*iknilvi*kkkkkki---

---KKXXVXXFFFFFPPKKKKKKKKKKXQKKKKKKKKKKKKKKKKK

Frame C:
knkkkkkkkkkkkklfskikihihk*kiy**ykkkkkkk---

---knxxxxffffffpqkkkkkkkkknxkkkkkkkkkkkkkkkkk

 ***** No hits found ******

Lambda     K      H
    1.37    0.711     1.31

Gapped
Lambda     K      H
    1.37    0.711     1.31

Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 0
Number of Sequences: 97611
Number of extensions: 0
Number of successful extensions: 0
Number of sequences better than 10.0: 0
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 0
length of query: 261
length of database: 80,480,566
effective HSP length: 17
effective length of query: 244
effective length of database: 78,821,179
effective search space: 19232367676
effective search space used: 19232367676
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 16 (32.2 bits)

 ***** No hits found ******

Lambda     K      H
    1.37    0.711     1.31

Matrix: blastn matrix:1 -3
Number of Hits to DB: 0
Number of Sequences: 25047164
Number of extensions: 0
Number of successful extensions: 0
Number of sequences better than 10.0: 0
length of query: 261
length of database: P,440,743,729
effective HSP length: 22
effective length of query: 239
effective length of database: O,889,706,121
effective search space: 7621639762919
effective search space used: 7621639762919
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 10 (19.8 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

ANTI-DNA BLAST search was processed by blast@nig.ac.jp, National Institute of Genetics, Japan.

 ***** No hits found ******

Lambda     K      H
   0.318    0.134    0.401

Gapped
Lambda     K      H
   0.267   0.0410    0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3159261
Number of Hits to DB: 55,876,012

 psg: 0.49  gvh: 0.20  alm: 0.66  top: 0.53  tms: 0.00  mit: 0.39  mip: 0.00
 nuc: 2.90  erl: 0.00  erm: 0.80  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 72.0 %: nuclear
	 16.0 %: cytoplasmic
	  8.0 %: mitochondrial
	  4.0 %: cytoskeletal

>> prediction for SSB273 is nuc

>SSB273F.Seq
AAAAAAATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACTTTTTTCAAAAATAA
AAATACACATACATAAATAAAAAATATATTAGTAATATAAAAAAAAAAAAAAAAAAAAAT
T----------

>SSB273Z.Seq
----------TAAAAAATTNTTNGTTNTGNTTTTTTTTTTTTTTTTTCCCCCAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAACNNCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAA

>SSB273P.Seq
AAAAAAATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACTTTTTTCAAAAATAA
AAATACACATACATAAATAAAAAATATATTAGTAATATAAAAAAAAAAAAAAAAAAAAAT
T----------TAAAAAATTNTTNGTTNTGNTTTTTTTTTTTTTTTTTCCCCCAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAACNNCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAA