>SSA650 (SSA650Q) /CSM/SS/SSA6-C/SSA650Q.Seq.d/
AAAAAACAAAAAAAATAAAAAAATAAATAAATAAATAAATAAATAAATAAATAAATAAAT
AAAAAAATAAAATGAATTTTAATAAATTATTTGTAATATTATCAACAATATTCTTTTTAG
CAACAAATTATATTAAGATTGGAGAGGCATCATGTTCAGAACAATTAGCAGGTTATTTCA
ATGAAAAAAATCAAAATGTTCAATTAACATTTGTTCGTCCACAAGGTGATGTAGTTTACA
TAAGCAATACCCTATCATATTATCCCTATGGAAGTTTCTTAACAAATGGTAATTCATTTC
CAGCATTGTTTTCATCCAGGACCAAAACAACTCCATCAGGTGTGCAACCATTTGATATTG
ATCAAAAACAAACATCATTCTATGATAGAAGTGGTATTATATTAAGACAAGATGGTTCAT
TATCAATGAGAGCTTTATGGTCTGGTCCATTCACTGTGAATTTAACATGTACAAATTCTG
GTTCTCTTAATTATGGTATTGCTGATAATGGTTATTTAGTATCATTACAATTTAAATAAA
ATTATTTATTAAATAXXXXXXXXXX

ktkkikk*ink*ink*ink*KNKMNFNKLFVILSTIFFLATNYIKIGEASCSEQLAGYFN
EKNQNVQLTFVRPQGDVVYISNTLSYYPYGSFLTNGNSFPALFSSRTKTTPSGVQPFDID
QKQTSFYDRSGIILRQDGSLSMRALWSGPFTVNLTCTNSGSLNYGIADNGYLVSLQFK*n
ylln---

Frame A:
kkqkk*knk*ink*ink*inkkik*ilinyl*yyqqysf*qqiilrlerhhvqnn*qvis
mkkikmfn*hlfvhkvm*ft*aipyhiipmevs*qmvihfqhcfhpgpkqlhqvcnhlil
iknkhhsmievvly*dkmvhyq*elyglvhsl*i*hvqilvllimvllimvi*yhynlnk
iiy*---


Frame B:
knkknkkink*ink*ink*ikk*nef**iicniinnilfsnkly*dwrgimfrtisrlfq
*kkskcsinicsstr*cslhkqypiilslwkflnkw*fissivfiqdqnnsircati*y*
sktniil**kwyyiktrwfiinesfmvwsihcefnmykfwfs*lwyc**wlfsiiti*ik
lfik---


Frame C:
ktkkikk*ink*ink*ink*KNKMNFNKLFVILSTIFFLATNYIKIGEASCSEQLAGYFN
EKNQNVQLTFVRPQGDVVYISNTLSYYPYGSFLTNGNSFPALFSSRTKTTPSGVQPFDID
QKQTSFYDRSGIILRQDGSLSMRALWSGPFTVNLTCTNSGSLNYGIADNGYLVSLQFK*n
ylln---

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SSM313 (SSM313Q) /CSM/SS/SSM3-A/SSM313Q.Seq.d/                        914   0.0
SSM172 (SSM172Q) /CSM/SS/SSM1-C/SSM172Q.Seq.d/                        914   0.0
SSM155 (SSM155Q) /CSM/SS/SSM1-C/SSM155Q.Seq.d/                        914   0.0
SSL679 (SSL679Q) /CSM/SS/SSL6-D/SSL679Q.Seq.d/                        914   0.0
SSL668 (SSL668Q) /CSM/SS/SSL6-C/SSL668Q.Seq.d/                        914   0.0
SSE524 (SSE524Q) /CSM/SS/SSE5-A/SSE524Q.Seq.d/                        914   0.0
SSE342 (SSE342Q) /CSM/SS/SSE3-B/SSE342Q.Seq.d/                        914   0.0
SSC507 (SSC507Q) /CSM/SS/SSC5-A/SSC507Q.Seq.d/                        914   0.0
SSA650 (SSA650Q) /CSM/SS/SSA6-C/SSA650Q.Seq.d/                        914   0.0
SSK536 (SSK536Q) /CSM/SS/SSK5-B/SSK536Q.Seq.d/                        908   0.0

                                                               Score     E
Sequences producing significant alignments:                    (bits)  Value  N

BM608903|BM608903.1 17000687086872 A.Gam.ad.cDNA.blood1 Anopheles gambiae cDNA clone 19600449690492 5', mRNA sequence.    42  2e-04  2
BH468477|BH468477.1 BOGHT60TF BOGH Brassica oleracea genomic clone BOGHT60, DNA sequence.    50  5e-04  2
AL845350|AL845350.6 Mouse DNA sequence from clone RP23-322M5 on chromosome 2.    38  0.048  4
BM625754|BM625754.1 17000687493646 A.Gam.ad.cDNA1 Anopheles gambiae cDNA clone 19600449641588 5', mRNA sequence.    42  0.075  2
BM595657|BM595657.1 17000687475903 A.Gam.ad.cDNA.blood1 Anopheles gambiae cDNA clone 19600449718151 5', mRNA sequence.    42  0.10  2
AC138300|AC138300.4 Mus musculus chromosome 14 clone RP23-187B20 map 14, *** SEQUENCING IN PROGRESS ***, 3 ordered pieces.    48  0.12  1
AL844509|AL844509.1 Plasmodium falciparum chromosome 13.          38  0.14  6
AC116551|AC116551.2 Dictyostelium discoideum chromosome 2 map complement(581327-427576) strain AX4, complete sequence.    34  0.14  6
AC116349|AC116349.2 Homo sapiens chromosome 5 clone RP11-30F18, complete sequence.    46  0.19  3
AC104741|AC104741.2 Homo sapiens chromosome 3 clone RP11-228H5, complete sequence.    36  0.22  4

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

(P83913) RecName: Full=Leupeptin-inactivating enzyme 2;         ...    36   0.78
CP000150_565(CP000150|pid:none) Burkholderia sp. 383 chromosome ...    33   5.1
CP000323_705(CP000323|pid:none) Psychrobacter cryohalolentis K5,...    33   5.1
AY084362_1(AY084362|pid:none) Arabidopsis thaliana clone 105450 ...    32   8.7
(Q9GCB9) RecName: Full=Ribosomal protein S2, mitochondrial;  &AC...    32   8.7
BA000016_852(BA000016|pid:none) Clostridium perfringens str. 13 ...    32   8.7
DQ212986_1(DQ212986|pid:none) Enterococcus faecalis VanG vancomy...    32   8.7

 psg: 0.97  gvh: 0.49  alm: 0.34  top: 0.40  tms: 0.00  mit: 0.29  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 36.0 %: cytoplasmic
	 32.0 %: nuclear
	 12.0 %: extracellular, including cell wall
	  8.0 %: mitochondrial
	  4.0 %: vacuolar
	  4.0 %: vesicles of secretory system
	  4.0 %: endoplasmic reticulum

>> prediction for SSA650 is cyt

>SSA650F.Seq
AAAAAACAAAAAAAATAAAAAAATAAATAAATAAATAAATAAATAAATAAATAAATAAAT
AAAAAAATAAAATGAATTTTAATAAATTATTTGTAATATTATCAACAATATTCTTTTTAG
CAACAAATTATATTAAGATTGGAGAGGCATCATGTTCAGAACAATTAGCAGGTTATTTCA
ATGAAAAAAATCAAAATGTTCAATTAACATTTGTTCGTCCACAAGGTGATGTAGTTTACA
TAAGCAATACCCTATCATATTATCCCTATGGAAGTTTCTTAACAAATGGTAATTCATTTC
CAGCATTGTTTTCATCCAGGACCAAAACAACTCCATCAGGTGTGCAACCATTTGATATTG
ATCAAAAACAAACATCATTCTATGATAGAAGTGGTATTATATTAAGACAAGATGGTTCAT
TATCAATGAGAGCTTTATGGTCTGGTCCATTCACTGTGAATTTAACATGTACAAATTCTG
GTTCTCTTAATTATGGTATTGCTGATAATGGTTATTTAGTATCATTACAATTTAAATAAA
ATTATTTATTAAATA----------