>SSA591 (SSA591Q) /CSM/SS/SSA5-D/SSA591Q.Seq.d/
XXXXXXXXXXTTTTCAAGATATTCAAAATTTTATCCAAGATTATGACTTAAATAAGGATT
ACAGTGTAACTTCATCTGAAATATATCAATCATTTTTAAAAAAAATGAATGGTGATAGTT
TAAAGGCATCACAGGCAGCTGGTGTTTTATGTTCAACAGTTGATATGGACAATGATGGTA
AATTCAGTTATTATGAAATTTCTAAATATTGTGCAGACCAGGCAAAAAAACAAATTGAAC
AAAATGCTGAGACTGCTGCATTGGCTGATGTCGAAGCATTGTTATTAAGACTTGATAAAG
ATAAGGATAAAAAATTAAACAAAACAGAATTTGTTAAATTCTTTAAAGAACAGGGCTATA
ATCCATACTCTGACCCTGATTATGTTCTTAAAATTATTGATTTGGATAANGATGGATATG
TNTCCGCAAGTGAATTNCAAGAATGGTTCAAACAAAAAAGATTGGCTTATGCAAGAGGTC
CAATTTGTTAAATTCTCTTGGGACAAAATACCACATTAATCTTATTTTTTAAGGTTTTTA
AATTTGGTACAAAAAAATAAAAATTAAATAAATATTCAATTTCCATTGTCCAAAATCCAA
AAAAAAAAAAAAAAAAA

---FQDIQNFIQDYDLNKDYSVTSSEIYQSFLKKMNGDSLKASQAAGVLCSTVDMDNDGK
FSYYEISKYCADQAKKQIEQNAETAALADVEALLLRLDKDKDKKLNKTEFVKFFKEQGYN
PYSDPDYVLKIIDLDXDGYVSASEXQEWFKQKRLAYARGPIC*illgqnttlilffkvfk
fgtkk*klnkysisivqnpkkkkkk

Frame A:
---FQDIQNFIQDYDLNKDYSVTSSEIYQSFLKKMNGDSLKASQAAGVLCSTVDMDNDGK
FSYYEISKYCADQAKKQIEQNAETAALADVEALLLRLDKDKDKKLNKTEFVKFFKEQGYN
PYSDPDYVLKIIDLDXDGYVSASEXQEWFKQKRLAYARGPIC*illgqnttlilffkvfk
fgtkk*klnkysisivqnpkkkkkk


Frame B:
---fkifkilskimt*iritv*lhlkyinhf*kk*mviv*rhhrqlvfyvqqliwtmmvn
svimkflnivqtrqknklnkmlrllhwlmskhcy*dlikirikn*tkqnllnslknraii
htltlimflklliwixmdmxpqvnxkngsnkkdwlmqevqfvkfswdkiph*syflrfln
lvqknkn*iniqfplskiqkkkkk


Frame C:
---sryskfyprl*lk*glqcnfi*nisiifkknew**fkgitgswcfmfns*ygq*w*i
qll*nf*ilcrpgkktn*tkc*dccig*crsivikt**r*g*kikqnric*il*rtgl*s
il*p*lcs*ny*fg*xwicxrk*ixrmvqtkkiglckrsnllnslgtkyhinlif*gf*i
wykkikik*ifnfhcpkskkkkkk

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SSM536 (SSM536Q) /CSM/SS/SSM5-B/SSM536Q.Seq.d/                        963   0.0
SSM254 (SSM254Q) /CSM/SS/SSM2-C/SSM254Q.Seq.d/                        963   0.0
SSK215 (SSK215Q) /CSM/SS/SSK2-A/SSK215Q.Seq.d/                        963   0.0
SSI258 (SSI258Q) /CSM/SS/SSI2-C/SSI258Q.Seq.d/                        963   0.0
SSF123 (SSF123Q) /CSM/SS/SSF1-A/SSF123Q.Seq.d/                        963   0.0
SSA591 (SSA591Q) /CSM/SS/SSA5-D/SSA591Q.Seq.d/                        963   0.0
SSJ723 (SSJ723Q) /CSM/SS/SSJ7-A/SSJ723Q.Seq.d/                        955   0.0
SSD683 (SSD683Q) /CSM/SS/SSD6-D/SSD683Q.Seq.d/                        952   0.0
SSH174 (SSH174Q) /CSM/SS/SSH1-D/SSH174Q.Seq.d/                        950   0.0
SSE532 (SSE532Q) /CSM/SS/SSE5-B/SSE532Q.Seq.d/                        950   0.0

                                                               Score     E
Sequences producing significant alignments:                    (bits)  Value  N

AB070449|AB070449.1 Dictyostelium discoideum cbpG mRNA for calcium binding protein CBP7, complete cds, clone:SSM207.   617  0.0  4
AB070448|AB070448.1 Dictyostelium discoideum cbpF mRNA for calcium binding protein CBP6, complete cds, clone:SSA631.   234  e-137  4
AF076972|AF076972.1 Dictyostelium discoideum calcium-binding protein mRNA, complete cds.   151  e-106  6
AC007017|AC007017.4 Arabidopsis thaliana chromosome 2 clone F11F19 map g6825, complete sequence.    48  0.018  2
AC116551|AC116551.2 Dictyostelium discoideum chromosome 2 map complement(581327-427576) strain AX4, complete sequence.    32  0.062  8
AP003193|AP003193.2 Clostridium perfringens DNA, complete genome, section 9/10.    34  0.095  9
AQ966783|AQ966783.1 LERIM16TRB LERG Arabidopsis thaliana genomic clone LERIM16, genomic survey sequence.    48  0.13  1
AL023835|AL023835.1 Caenorhabditis elegans YAC Y37A1B.            38  0.35  3
AC116960|AC116960.2 Dictyostelium discoideum chromosome 2 map complement(1004496-821614) strain AX4, complete sequence.    34  0.43  6
AC125059|AC125059.4 Mus musculus chromosome UNK clone RP23-404P13, WORKING DRAFT SEQUENCE, 2 unordered pieces.    38  0.50  6

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

(Q54QT9) RecName: Full=Calcium-binding protein F; AltName: Full=...   211   2e-53
(Q54QU0) RecName: Full=Calcium-binding protein F-like; AltName: ...   209   4e-53
(Q54QT7) RecName: Full=Calcium-binding protein C; AltName: Full=...   193   3e-48
(Q966Q9) RecName: Full=Calcium-binding protein H; AltName: Full=...    48   2e-04
(Q2TBI5) RecName: Full=Calcineurin subunit B type 2; AltName: Fu...    40   0.040
AY336971_1(AY336971|pid:none) Xenopus laevis protein phospatase ...    39   0.12
AB375794_1(AB375794|pid:none) Bos taurus mRNA for calcineurin B,...    39   0.15
JC1220(JC1220) calcineurin regulatory chain, brain - mouse  &S43...    39   0.15
D14425_1(D14425|pid:none) Rattus sp. mRNA for calcineurin B, com...    39   0.15
CU640366_1300(CU640366|pid:none) Podospora anserina genomic DNA ...    38   0.20

 psg: 0.75  gvh: 0.41  alm: 0.48  top: 0.53  tms: 0.00  mit: 0.19  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 48.0 %: cytoplasmic
	 28.0 %: nuclear
	  8.0 %: cytoskeletal
	  8.0 %: mitochondrial
	  4.0 %: vacuolar
	  4.0 %: endoplasmic reticulum

>> prediction for SSA591 is cyt

>SSA591Z.Seq
----------TTTTCAAGATATTCAAAATTTTATCCAAGATTATGACTTAAATAAGGATT
ACAGTGTAACTTCATCTGAAATATATCAATCATTTTTAAAAAAAATGAATGGTGATAGTT
TAAAGGCATCACAGGCAGCTGGTGTTTTATGTTCAACAGTTGATATGGACAATGATGGTA
AATTCAGTTATTATGAAATTTCTAAATATTGTGCAGACCAGGCAAAAAAACAAATTGAAC
AAAATGCTGAGACTGCTGCATTGGCTGATGTCGAAGCATTGTTATTAAGACTTGATAAAG
ATAAGGATAAAAAATTAAACAAAACAGAATTTGTTAAATTCTTTAAAGAACAGGGCTATA
ATCCATACTCTGACCCTGATTATGTTCTTAAAATTATTGATTTGGATAANGATGGATATG
TNTCCGCAAGTGAATTNCAAGAATGGTTCAAACAAAAAAGATTGGCTTATGCAAGAGGTC
CAATTTGTTAAATTCTCTTGGGACAAAATACCACATTAATCTTATTTTTTAAGGTTTTTA
AATTTGGTACAAAAAAATAAAAATTAAATAAATATTCAATTTCCATTGTCCAAAATCCAA
AAAAAAAAAAAAAAAAA