>SSA537 (SSA537Q) /CSM/SS/SSA5-B/SSA537Q.Seq.d/
GTCTTTGTTTTGGTGGTTGTAAACCAACACATGGTATTCTTTGTCCAGGTCCAAAATATG
ACCCAGATATTGGTGAAGGTTACTCAAAGGGTAGAGTTTTTATATTAAAATTGGTTACAT
TAATTATGGTTGCAGGTTGTGTTGCAGTTTTCATTACAAGTTTAAAGGGTAATTCCTCTG
TGACCTCTGGTATTAACAATTTGAGTGACACTGTTTTCAATAAAACCTCATACACTTTAG
AACAATTGATTGAGATTAGTAATCAATTAAATGAGACTAAATATCAACAATTTGATCAAA
AACAAGAGATTCAATCACAATTGACCCAATTGATTAGCGATGGTGAGGAACTCGAGAGTA
AAGGCGAGGATATCAGTTCCAACGCAAAGGATATAAATAATATTAGAACAAAGATCATTA
TCGTCGGTTTAGTATTTTGCATGGTAGTGGCAGGCCTCATTGGTGTATCAGCACTAATTG
GTCTACCAAGAATTTCACGTGCAGCCTCTATCGCTTTGGTAATTTTAATTCCATTCATGT
GGATCGTTTTCTCTGTTCATTATCCAATCAATAGTGTCGTTGCTGATATTTGTATAAGTT
ATGATACAACTGGTGTACAACAATTATCAAATTTTACAAATCCAATTATCGAACAGGTCT
TTGAAGGCTGTCAAAXXXXXXXXXXAAATGTAAGAATGCACCAACTTGTGGTGATTTATC
AACTTGTGATCCATCCATTCTTACCGAAGTTATGTCTTGTGATTGGGTAGATGTTAGTTC
TGTTAATTCTTGCTCTCAAGGTGGTTGCCAATACAACCAACAAGTTGTAAATACTACAAA
ACAAATTATGCAACTTTATGATATCTTAACTTCACTCACTACTCTTTGGACTGATAAAGT
TGTACCATTAATTAAATGTTCATATCTTATGCCATTCATAGATGAAGTTCAAAATATTGT
TTGCGTTGATGAAGTTAATTCTTTAGATCTCTTAATAGCTCCAACTGCAGTGTTTGCCAT
TTTATTAACTGGACTTGGTATTACTGGTATCTTAGGAAGTAAGAGATTTAATTCCAAATA
CCGTGTAAAGGGAAGTAGATCAGCTTAATTCCTTGATTATCAAGTTTTTACTATAATTAT
ATATATATACAAAATCGACTGTTAAATATTTGAATAACTTAAATAAAGTTTATTTATTTT
CTAAAATTAAAAAAAA

LCFGGCKPTHGILCPGPKYDPDIGEGYSKGRVFILKLVTLIMVAGCVAVFITSLKGNSSV
TSGINNLSDTVFNKTSYTLEQLIEISNQLNETKYQQFDQKQEIQSQLTQLISDGEELESK
GEDISSNAKDINNIRTKIIIVGLVFCMVVAGLIGVSALIGLPRISRAASIALVILIPFMW
IVFSVHYPINSVVADICISYDTTGVQQLSNFTNPIIEQVFEGCQ---

---KCKNAPTCGDLSTCDPSILTEVMSCDWVDVSSVNSCSQGGCQYNQQVVNTTKQIMQL
YDILTSLTTLWTDKVVPLIKCSYLMPFIDEVQNIVCVDEVNSLDLLIAPTAVFAILLTGL
GITGILGSKRFNSKYRVKGSRSA*fldyqvftiiiyiykidc*ife*lk*slfif*n*kk

Frame A:
vfvlvvvnqhmvffvqvqnmtqilvkvtqrvefly*nwlh*lwlqvvlqfslqv*rvipl
*plvlti*vtlfsikphtl*nn*lrlvin*mrlninnliknkrfnhn*pn*lamvrnsrv
karisvptqri*iileqrslssv*yfaw*wqaslvyqh*lvyqefhvqplslw*f*fhsc
gsfslfiiqsivsllifv*vmiqlvynnyqilqiqlsnrslkavk---

---KCKNAPTCGDLSTCDPSILTEVMSCDWVDVSSVNSCSQGGCQYNQQVVNTTKQIMQL
YDILTSLTTLWTDKVVPLIKCSYLMPFIDEVQNIVCVDEVNSLDLLIAPTAVFAILLTGL
GITGILGSKRFNSKYRVKGSRSA*fldyqvftiiiyiykidc*ife*lk*slfif*n*kk

Frame B:
slfwwl*tntwyslsrski*pryw*rllkg*sfyikigyinygcrlccsfhykfkg*flc
dlwy*qfe*hcfq*nlihfrtid*d**sik*d*isti*sktrdsitidpid*rw*gtre*
rrgyqfqrkgyk*y*nkdhyrrfsilhgsgrphwcistnwstknftcslyrfgnfnsihv
drflcslsnq*crc*ylykl*ynwcttiikfyksnyrtgl*rls---

---nvrmhqlvviyqlvihpflpklclvig*mlvllilalkvvanttnkl*ilqnklcnf
mis*lhsllfgliklyh*lnvhilchs*mkfkilfalmklil*is**lqlqclpfy*ldl
vllvs*evrdlipntv*revdqlnsliikfll*lyiytkstvkylnnlnkvylfskikk

Frame C:
LCFGGCKPTHGILCPGPKYDPDIGEGYSKGRVFILKLVTLIMVAGCVAVFITSLKGNSSV
TSGINNLSDTVFNKTSYTLEQLIEISNQLNETKYQQFDQKQEIQSQLTQLISDGEELESK
GEDISSNAKDINNIRTKIIIVGLVFCMVVAGLIGVSALIGLPRISRAASIALVILIPFMW
IVFSVHYPINSVVADICISYDTTGVQQLSNFTNPIIEQVFEGCQ---

---m*ectnlw*finl*sihsyrsyvl*lgrc*fc*fllsrwlpiqptsckyyktnyatl
*ylnfthysld**sctin*mfisyaihr*sskyclr**s*ffrslnssncsvchfinwtw
yywylrk*ei*fqipckgk*islip*lssfyynyiyiqnrllni*it*ikfiyflklkk

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SSA537 (SSA537Q) /CSM/SS/SSA5-B/SSA537Q.Seq.d/                       2264   0.0
SSF190 (SSF190Q) /CSM/SS/SSF1-D/SSF190Q.Seq.d/                       1029   0.0
SLE313 (SLE313Q) /CSM/SL/SLE3-A/SLE313Q.Seq.d/                        950   0.0
AHQ437 (AHQ437Q) /CSM/AH/AHQ4-B/AHQ437Q.Seq.d/                        910   0.0
AFI885 (AFI885Q) /CSM/AF/AFI8-D/AFI885Q.Seq.d/                        638   0.0
FC-IC0541 (FC-IC0541Q) /CSM/FC-IC/FC-IC0541Q.Seq.d/                   432   e-120
FC-IC1231 (FC-IC1231Q) /CSM/FC-IC/FC-IC1231Q.Seq.d/                   103   6e-21
VFJ177 (VFJ177Q) /CSM/VF/VFJ1-D/VFJ177Q.Seq.d/                         96   2e-18
SSM708 (SSM708Q) /CSM/SS/SSM7-A/SSM708Q.Seq.d/                         96   2e-18
SSM258 (SSM258Q) /CSM/SS/SSM2-C/SSM258Q.Seq.d/                         96   2e-18

                                                               Score     E
Sequences producing significant alignments:                    (bits)  Value  N

AC117072|AC117072.2 Dictyostelium discoideum chromosome 2 map 3323568-3470138 strain AX4, complete sequence.    40  0.15  8
AC103396|AC103396.3 Mus musculus clone RP24-142I5, WORKING DRAFT SEQUENCE, 41 unordered pieces.    42  0.36  4
AC134219|AC134219.2 Rattus norvegicus clone CH230-35M8, *** SEQUENCING IN PROGRESS ***, 1 ordered piece.    34  0.48  9
AC016150|AC016150.19 Homo sapiens chromosome X clone RP11-503D9, WORKING DRAFT SEQUENCE, 25 unordered pieces.    46  1.0  1
AC109554|AC109554.4 Rattus norvegicus clone CH230-331D3, *** SEQUENCING IN PROGRESS ***, 1 ordered piece.    46  1.0  1
AC109803|AC109803.1 Homo sapiens chromosome 3 clone RP11-37F14, WORKING DRAFT SEQUENCE, 4 unordered pieces.    46  1.0  1
AC011987|AC011987.5 Homo sapiens clone RP11-19B13, WORKING DRAFT SEQUENCE, 12 unordered pieces.    46  1.0  1
AL353757|AL353757.9 Human DNA sequence from clone RP11-439I8 on chromosome 13.    46  1.0  1
AC107510|AC107510.5 Rattus norvegicus clone CH230-138J6, *** SEQUENCING IN PROGRESS ***, 4 unordered pieces.    46  1.0  1
BM064293|BM064293.1 KS01065D06 KS01 Capsicum annuum cDNA, mRNA sequence.    46  1.0  1

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF085853_1(EF085853|pid:none) Picea sitchensis clone WS02812_M21...    54   1e-05
AK064917_1(AK064917|pid:none) Oryza sativa Japonica Group cDNA c...    54   1e-05
FB861715_1(FB861715|pid:none) Sequence 80988 from Patent WO20080...    53   2e-05
FB861745_1(FB861745|pid:none) Sequence 81018 from Patent WO20080...    53   2e-05
AC152347_9(AC152347|pid:none) Medicago truncatula clone mth2-28c...    43   0.019
AF062395_1(AF062395|pid:none) Borrelia turicatae 91E135 repeat m...    40   0.16
CP000685_241(CP000685|pid:none) Flavobacterium johnsoniae UW101,...    40   0.21
CP001217_105(CP001217|pid:none) Helicobacter pylori P12, complet...    39   0.28
CP001173_88(CP001173|pid:none) Helicobacter pylori G27, complete...    39   0.28
AE000511_101(AE000511|pid:none) Helicobacter pylori 26695, compl...    39   0.36

 psg: 0.84  gvh: 0.63  alm: 0.14  top: 0.47  tms: 0.27  mit: 0.19  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 1.00  m3b: 0.00  m_ : 0.00 

	 32.0 %: endoplasmic reticulum
	 24.0 %: mitochondrial
	 24.0 %: plasma membrane
	  8.0 %: extracellular, including cell wall
	  4.0 %: Golgi
	  4.0 %: vacuolar
	  4.0 %: vesicles of secretory system

>> prediction for SSA537 is end

>SSA537F.Seq
GTCTTTGTTTTGGTGGTTGTAAACCAACACATGGTATTCTTTGTCCAGGTCCAAAATATG
ACCCAGATATTGGTGAAGGTTACTCAAAGGGTAGAGTTTTTATATTAAAATTGGTTACAT
TAATTATGGTTGCAGGTTGTGTTGCAGTTTTCATTACAAGTTTAAAGGGTAATTCCTCTG
TGACCTCTGGTATTAACAATTTGAGTGACACTGTTTTCAATAAAACCTCATACACTTTAG
AACAATTGATTGAGATTAGTAATCAATTAAATGAGACTAAATATCAACAATTTGATCAAA
AACAAGAGATTCAATCACAATTGACCCAATTGATTAGCGATGGTGAGGAACTCGAGAGTA
AAGGCGAGGATATCAGTTCCAACGCAAAGGATATAAATAATATTAGAACAAAGATCATTA
TCGTCGGTTTAGTATTTTGCATGGTAGTGGCAGGCCTCATTGGTGTATCAGCACTAATTG
GTCTACCAAGAATTTCACGTGCAGCCTCTATCGCTTTGGTAATTTTAATTCCATTCATGT
GGATCGTTTTCTCTGTTCATTATCCAATCAATAGTGTCGTTGCTGATATTTGTATAAGTT
ATGATACAACTGGTGTACAACAATTATCAAATTTTACAAATCCAATTATCGAACAGGTCT
TTGAAGGCTGTCAAA----------

>SSA537Z.Seq
----------AAATGTAAGAATGCACCAACTTGTGGTGATTTATCAACTTGTGATCCATC
CATTCTTACCGAAGTTATGTCTTGTGATTGGGTAGATGTTAGTTCTGTTAATTCTTGCTC
TCAAGGTGGTTGCCAATACAACCAACAAGTTGTAAATACTACAAAACAAATTATGCAACT
TTATGATATCTTAACTTCACTCACTACTCTTTGGACTGATAAAGTTGTACCATTAATTAA
ATGTTCATATCTTATGCCATTCATAGATGAAGTTCAAAATATTGTTTGCGTTGATGAAGT
TAATTCTTTAGATCTCTTAATAGCTCCAACTGCAGTGTTTGCCATTTTATTAACTGGACT
TGGTATTACTGGTATCTTAGGAAGTAAGAGATTTAATTCCAAATACCGTGTAAAGGGAAG
TAGATCAGCTTAATTCCTTGATTATCAAGTTTTTACTATAATTATATATATATACAAAAT
CGACTGTTAAATATTTGAATAACTTAAATAAAGTTTATTTATTTTCTAAAATTAAAAAAA
A

>SSA537P.Seq
GTCTTTGTTTTGGTGGTTGTAAACCAACACATGGTATTCTTTGTCCAGGTCCAAAATATG
ACCCAGATATTGGTGAAGGTTACTCAAAGGGTAGAGTTTTTATATTAAAATTGGTTACAT
TAATTATGGTTGCAGGTTGTGTTGCAGTTTTCATTACAAGTTTAAAGGGTAATTCCTCTG
TGACCTCTGGTATTAACAATTTGAGTGACACTGTTTTCAATAAAACCTCATACACTTTAG
AACAATTGATTGAGATTAGTAATCAATTAAATGAGACTAAATATCAACAATTTGATCAAA
AACAAGAGATTCAATCACAATTGACCCAATTGATTAGCGATGGTGAGGAACTCGAGAGTA
AAGGCGAGGATATCAGTTCCAACGCAAAGGATATAAATAATATTAGAACAAAGATCATTA
TCGTCGGTTTAGTATTTTGCATGGTAGTGGCAGGCCTCATTGGTGTATCAGCACTAATTG
GTCTACCAAGAATTTCACGTGCAGCCTCTATCGCTTTGGTAATTTTAATTCCATTCATGT
GGATCGTTTTCTCTGTTCATTATCCAATCAATAGTGTCGTTGCTGATATTTGTATAAGTT
ATGATACAACTGGTGTACAACAATTATCAAATTTTACAAATCCAATTATCGAACAGGTCT
TTGAAGGCTGTCAAA----------AAATGTAAGAATGCACCAACTTGTGGTGATTTATC
AACTTGTGATCCATCCATTCTTACCGAAGTTATGTCTTGTGATTGGGTAGATGTTAGTTC
TGTTAATTCTTGCTCTCAAGGTGGTTGCCAATACAACCAACAAGTTGTAAATACTACAAA
ACAAATTATGCAACTTTATGATATCTTAACTTCACTCACTACTCTTTGGACTGATAAAGT
TGTACCATTAATTAAATGTTCATATCTTATGCCATTCATAGATGAAGTTCAAAATATTGT
TTGCGTTGATGAAGTTAATTCTTTAGATCTCTTAATAGCTCCAACTGCAGTGTTTGCCAT
TTTATTAACTGGACTTGGTATTACTGGTATCTTAGGAAGTAAGAGATTTAATTCCAAATA
CCGTGTAAAGGGAAGTAGATCAGCTTAATTCCTTGATTATCAAGTTTTTACTATAATTAT
ATATATATACAAAATCGACTGTTAAATATTTGAATAACTTAAATAAAGTTTATTTATTTT
CTAAAATTAAAAAAAA