>SSA503 (SSA503Q) /CSM/SS/SSA5-A/SSA503Q.Seq.d/
XXXXXXXXXXAAACTATATCTGATGATTTAAGAAGACAATTATTGTTTAAACAACTACCA
CTTTATCAAGAAGGAGATTTCAAAATCGTTCAAACTCCTGCGATAATTGATTACATTTCA
GAGAAACATGATTTTCGTGGTAAAACCAAAGAAGAAAGAGCAAGAGCTCATCAATGTTTA
GCAGGTATAATGGAAGTTTTGGACCATTGTTTGGAATATTCATTTAAAATGGATAAACAA
CAACAAGAAAAATTCAGAAATGAAAGTCCAATAAAGAAATTTTTTGAAGGTTTTGAAATG
GTACTTTCTCAAAATAAATATTTGGCATCTGGTGAAAAAGAAACTTATGTTGATCTTATG
GCATTTGTAATGGTTGACTATGTCACTAATTTGGGTCTTATGCCAAGTGGTGATTATCCT
AAACTAATCTCTTTGAAAAAACATTATGAATCATCACCACAACTTAAAAAATATTTGGAA
TCAAGACCACAATCTAATTTCTAGAATATTCCTCAATTTTTTATTAATTTTTAATTTTAA
TTATTAAATAAAAAAAGAATAAAATAAAACTAAAA

---TISDDLRRQLLFKQLPLYQEGDFKIVQTPAIIDYISEKHDFRGKTKEERARAHQCLA
GIMEVLDHCLEYSFKMDKQQQEKFRNESPIKKFFEGFEMVLSQNKYLASGEKETYVDLMA
FVMVDYVTNLGLMPSGDYPKLISLKKHYESSPQLKKYLESRPQSNF*nipqffinf*f*l
lnkkrik*n*

Frame A:
---nyi**fkktiiv*ttttlsrrrfqnrsnscdn*lhfret*fsw*nqrrksksssmfs
ryngsfgplfgifi*ng*tttrkiqk*ksnkeif*rf*ngtfsk*ifgiw*krnlc*syg
icng*lch*fgsyakw*ls*tnlfektl*iittt*kifgiktti*fleyssify*flili
ik*kknkiklk


Frame B:
---TISDDLRRQLLFKQLPLYQEGDFKIVQTPAIIDYISEKHDFRGKTKEERARAHQCLA
GIMEVLDHCLEYSFKMDKQQQEKFRNESPIKKFFEGFEMVLSQNKYLASGEKETYVDLMA
FVMVDYVTNLGLMPSGDYPKLISLKKHYESSPQLKKYLESRPQSNF*nipqffinf*f*l
lnkkrik*n*


Frame C:
---lylmi*ednyclnnyhfikkeisksfkllr*litfqrnmifvvkpkkkeqelinv*q
v*wkfwtivwnihlkwinnnkknsemkvq*rnflkvlkwyflkiniwhlvkkklmlilwh
l*wltmsliwvlcqvviiln*sl*knimnhhhnlkniwnqdhnlisriflnfllifnfny
*ikke*nktk

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SSA503 (SSA503Q) /CSM/SS/SSA5-A/SSA503Q.Seq.d/                        997   0.0
SSL157 (SSL157Q) /CSM/SS/SSL1-C/SSL157Q.Seq.d/                        973   0.0
SSJ566 (SSJ566Q) /CSM/SS/SSJ5-C/SSJ566Q.Seq.d/                        973   0.0
SSI234 (SSI234Q) /CSM/SS/SSI2-B/SSI234Q.Seq.d/                        973   0.0
SSE684 (SSE684Q) /CSM/SS/SSE6-D/SSE684Q.Seq.d/                        973   0.0
SSC810 (SSC810Q) /CSM/SS/SSC8-A/SSC810Q.Seq.d/                        973   0.0
AHI677 (AHI677Q) /CSM/AH/AHI6-D/AHI677Q.Seq.d/                        973   0.0
SSH606 (SSH606Q) /CSM/SS/SSH6-A/SSH606Q.Seq.d/                        950   0.0
CFI708 (CFI708Q) /CSM/CF/CFI7-A/CFI708Q.Seq.d/                        928   0.0
SSK769 (SSK769Q) /CSM/SS/SSK7-C/SSK769Q.Seq.d/                        926   0.0

                                                               Score     E
Sequences producing significant alignments:                    (bits)  Value  N

AC116855|AC116855.3 Mus musculus clone RP24-402K18, WORKING DRAFT SEQUENCE, 3 unordered pieces.    38  0.024  4
AL109749|AL109749.22 Human DNA sequence from clone RP6-213H19 on chromosome Xq25-26.3.    34  0.026  5
Z69678|Z69678.1 D.schiavazzii satellite DNA (clone bdopvu2).      48  0.12  1
Z69669|Z69669.1 D.schiavazzii satellite DNA (clone vetpvu1).      48  0.12  1
AC068775|AC068775.52 Homo sapiens 12 BAC RP11-291B21 (Roswell Park Cancer Institute Human BAC Library) complete sequence.    38  0.21  4
AC000374|AC000374.1 Human cosmid g1980a170, complete sequence.    38  0.23  3
AX573239|AX573239.1 Sequence 85 from Patent WO02074992.           40  0.34  8
AC144371|AC144371.2 Felis catus clone RP86-182D16, WORKING DRAFT SEQUENCE, 9 ordered pieces.    42  0.47  5
AF020713|AF020713.1 Bacteriophage SPBc2 complete genome.          38  0.48  3
AC034161|AC034161.3 Homo sapiens chromosome 11 clone RP11-397J5, WORKING DRAFT SEQUENCE, 18 unordered pieces.    34  0.52  6

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

(Q54QV7) RecName: Full=Putative glutathione S-transferase alpha-...   316   2e-85
(Q86AU1) RecName: Full=Putative glutathione S-transferase alpha-...   101   2e-20
(Q55FF3) RecName: Full=Putative glutathione S-transferase alpha-...    99   6e-20
(Q54VI4) RecName: Full=Putative glutathione S-transferase alpha-...    92   1e-17
(P15964) RecName: Full=Glutathione S-transferase class-mu 26 kDa...    80   4e-14
(Q556G3) RecName: Full=Putative glutathione S-transferase alpha-...    80   4e-14
EU518245_1(EU518245|pid:none) Thais clavigera glutathione S-tran...    74   2e-12
U13853_1(U13853|pid:none) pGEX-4T1 cloning vector, complete sequ...    73   5e-12
U85201_1(U85201|pid:none) Expression vector pGH/F2.2-163, comple...    73   5e-12
FJ526990_1(FJ526990|pid:none) Cloning vector pEG(KT), complete s...    73   5e-12

 psg: 0.70  gvh: 0.30  alm: 0.38  top: 0.53  tms: 0.00  mit: 0.24  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 48.0 %: cytoplasmic
	 36.0 %: nuclear
	  8.0 %: mitochondrial
	  4.0 %: cytoskeletal
	  4.0 %: plasma membrane

>> prediction for SSA503 is cyt

>SSA503Z.Seq
----------AAACTATATCTGATGATTTAAGAAGACAATTATTGTTTAAACAACTACCA
CTTTATCAAGAAGGAGATTTCAAAATCGTTCAAACTCCTGCGATAATTGATTACATTTCA
GAGAAACATGATTTTCGTGGTAAAACCAAAGAAGAAAGAGCAAGAGCTCATCAATGTTTA
GCAGGTATAATGGAAGTTTTGGACCATTGTTTGGAATATTCATTTAAAATGGATAAACAA
CAACAAGAAAAATTCAGAAATGAAAGTCCAATAAAGAAATTTTTTGAAGGTTTTGAAATG
GTACTTTCTCAAAATAAATATTTGGCATCTGGTGAAAAAGAAACTTATGTTGATCTTATG
GCATTTGTAATGGTTGACTATGTCACTAATTTGGGTCTTATGCCAAGTGGTGATTATCCT
AAACTAATCTCTTTGAAAAAACATTATGAATCATCACCACAACTTAAAAAATATTTGGAA
TCAAGACCACAATCTAATTTCTAGAATATTCCTCAATTTTTTATTAATTTTTAATTTTAA
TTATTAAATAAAAAAAGAATAAAATAAAACTAAAA