>SSA351 (SSA351Q) /CSM/SS/SSA3-C/SSA351Q.Seq.d/
XXXXXXXXXXCCATTATATTAATGGTTAGCAGGTAGTCTTGCTATGATTATCTATAATAA
ACCTTTACAATTACAAGGATTAGGTCCAAAAACTATAGTGGGACAGGTGTGGTTTAATGC
TGTATTAGCTTTACATTCAATTTATTTAATTGGTGTAGGTTTCGAATTAATTTCAAGAGC
ATATCTTATGATGGTTGGTTCAACTTGTTCAGAACAAAGAAGAGGATTTTTATGTTGTTT
TGTATATTCAATGAGTATTTGGTGGAAATTAATGATGATTTTAGGTGTTGTTTCATCTAT
TGTATTATGTGGTTTGACAGCATTAGTGATTGTATTAGAAGGATTTGCAAAAATAAAGAT
TATTCGTTTAGCAGTTACAGATGCAGTAACATTGGTTCAATTATTCTTTAGTGTAATATG
TTTTGTAACATCAAGAGCCACCCAAAAAATGCAAGATGAAGAAGAGGAAGCACTTCATGG
TGTTAAAAAACAAGAACTCCAACCAACTAATTCTGCTGCATCAACTCCATCTTCTGCTCC
ACCATGTTATATTGTTGATGAGAAAAAAGATTCTGCTTCTCCATCTGGTCAATCTAAAGA
TTCTGAACCTTCAGCAGTTTTACCAGCTTAAATATTTTTAAAAAATTTTTAAAAATAATA
AAAAACAATAATAATAATTTTATAATACTAAAAAA

---ly*WLAGSLAMIIYNKPLQLQGLGPKTIVGQVWFNAVLALHSIYLIGVGFELISRAY
LMMVGSTCSEQRRGFLCCFVYSMSIWWKLMMILGVVSSIVLCGLTALVIVLEGFAKIKII
RLAVTDAVTLVQLFFSVICFVTSRATQKMQDEEEEALHGVKKQELQPTNSAASTPSSAPP
CYIVDEKKDSASPSGQSKDSEPSAVLPA*iflknf*k**ktiiiil*y*k

Frame A:
---hying*qvvll*lsiinlynykd*vqkl*wdrcglmly*lyiqfi*lv*vsn*fqeh
il*wlvqlvqnkeedfyvvlyiq*vfggn***f*vlfhllyyvv*qh**ly*kdlqk*rl
fv*qlqmq*hwfnyslv*yvl*hqeppkkckmkkrkhfmvlknknsnqlillhqlhlllh
hvillmrkkilllhlvnlkilnlqqfyqlkyf*kifknnkkq***fyntkk


Frame B:
---iilmvsr*scydyl**tftitrirsknysgtgvv*ccisftfnlfnwcrfrinfksi
sydgwfnlfrtkkrifmlfcifneylveinddfrccfiycimwfdsisdcirricknkdy
sfssyrcsnigsiil*cnmfcnikshpknar*rrgstswc*ktrtptn*fccinsifcst
mlyc**ekrfcfsiwsi*rf*tfssftslnifkkflkiiknnnnnfiilk


Frame C:
---ly*WLAGSLAMIIYNKPLQLQGLGPKTIVGQVWFNAVLALHSIYLIGVGFELISRAY
LMMVGSTCSEQRRGFLCCFVYSMSIWWKLMMILGVVSSIVLCGLTALVIVLEGFAKIKII
RLAVTDAVTLVQLFFSVICFVTSRATQKMQDEEEEALHGVKKQELQPTNSAASTPSSAPP
CYIVDEKKDSASPSGQSKDSEPSAVLPA*iflknf*k**ktiiiil*y*k

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SSA351 (SSA351Q) /CSM/SS/SSA3-C/SSA351Q.Seq.d/                       1225   0.0
SSL143 (SSL143Q) /CSM/SS/SSL1-B/SSL143Q.Seq.d/                       1201   0.0
SSI872 (SSI872Q) /CSM/SS/SSI8-C/SSI872Q.Seq.d/                       1168   0.0
SSI720 (SSI720Q) /CSM/SS/SSI7-A/SSI720Q.Seq.d/                       1130   0.0
SSF570 (SSF570Q) /CSM/SS/SSF5-C/SSF570Q.Seq.d/                       1128   0.0
SSI669 (SSI669Q) /CSM/SS/SSI6-C/SSI669Q.Seq.d/                       1104   0.0
SSM532 (SSM532Q) /CSM/SS/SSM5-B/SSM532Q.Seq.d/                       1065   0.0
SSM275 (SSM275Q) /CSM/SS/SSM2-D/SSM275Q.Seq.d/                       1027   0.0
SSC273 (SSC273Q) /CSM/SS/SSC2-D/SSC273Q.Seq.d/                        924   0.0
SSJ488 (SSJ488Q) /CSM/SS/SSJ4-D/SSJ488Q.Seq.d/                        844   0.0

                                                               Score     E
Sequences producing significant alignments:                    (bits)  Value  N

AL158164|AL158164.15 Human DNA sequence from clone RP11-414K1 on chromosome 10.    48  0.14  1
BX322665|BX322665.4 Zebrafish DNA sequence from clone DKEY-183N20 in linkage group 20.    44  0.19  4
AC090012|AC090012.8 Homo sapiens 12q BAC RP11-6F20 (Roswell Park Cancer Institute Human BAC Library) complete sequence.    38  0.20  5
AC027366|AC027366.1 Homo sapiens clone RP11-27F17, LOW-PASS SEQUENCE SAMPLING.    48  0.77  2
AC018583|AC018583.3 Homo sapiens clone RP11-6F20, WORKING DRAFT SEQUENCE, 10 unordered pieces.    38  1.1  5
AC131757|AC131757.2 Mus musculus chromosome UNK clone RP24-210I7, WORKING DRAFT SEQUENCE, 2 unordered pieces.    38  1.6  2
AL929493|AL929493.13 Zebrafish DNA sequence *** SEQUENCING IN PROGRESS *** from clone CH211-157D2.    36  1.7  4
BF273477|BF273477.1 GA__Eb0018C05f Gossypium arboreum 7-10 dpa fiber library Gossypium arboreum cDNA clone GA__Eb0018C05f, mRNA sequence.    44  2.2  1
AC131469|AC131469.5 Rattus norvegicus clone CH230-193C19, WORKING DRAFT SEQUENCE, 1 ordered piece.    44  2.2  1
BI316847|BI316847.1 saf76e12.y1 Gm-c1078 Glycine max cDNA clone GENOME SYSTEMS CLONE ID: Gm-c1078-2159 5' similar to TR:O22477 O22477 BETAINE ALDEHYDE DEHYDROGENASE ;, mRNA sequence.    38  2.6  2

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CP001150_1616(CP001150|pid:none) Rhodobacter sphaeroides KD131 c...    39   0.15
AJ010302_2(AJ010302|pid:none) Rhodobacter sphaeroides photosynth...    39   0.15
CP000143_1895(CP000143|pid:none) Rhodobacter sphaeroides 2.4.1 c...    39   0.15
AE017342_268(AE017342|pid:none) Cryptococcus neoformans var. neo...    37   0.56
GN107049_1(GN107049|pid:none) Sequence 11830 from Patent WO20090...    37   0.56
EU276418_1(EU276418|pid:none) Olive flounder iridovirus strain O...    36   0.96
AB043979_1(AB043979|pid:none) African lampeye iridovirus gene fo...    35   2.1
AY608684_1(AY608684|pid:none) Turbot reddish body iridovirus ade...    35   2.1
AB007367_1(AB007367|pid:none) Red sea bream iridovirus gene for ...    35   2.1
AF371960_123(AF371960|pid:none) Infectious spleen and kidney nec...    35   2.1

 psg: 0.93  gvh: 0.47  alm: 0.17  top: 0.50  tms: 0.20  mit: 0.15  mip: 0.22
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 1.00  m3b: 0.00  m_ : 0.00 

	 32.0 %: endoplasmic reticulum
	 28.0 %: plasma membrane
	 20.0 %: mitochondrial
	  8.0 %: extracellular, including cell wall
	  4.0 %: Golgi
	  4.0 %: vacuolar
	  4.0 %: vesicles of secretory system

>> prediction for SSA351 is end

>SSA351Z.Seq
----------CCATTATATTAATGGTTAGCAGGTAGTCTTGCTATGATTATCTATAATAA
ACCTTTACAATTACAAGGATTAGGTCCAAAAACTATAGTGGGACAGGTGTGGTTTAATGC
TGTATTAGCTTTACATTCAATTTATTTAATTGGTGTAGGTTTCGAATTAATTTCAAGAGC
ATATCTTATGATGGTTGGTTCAACTTGTTCAGAACAAAGAAGAGGATTTTTATGTTGTTT
TGTATATTCAATGAGTATTTGGTGGAAATTAATGATGATTTTAGGTGTTGTTTCATCTAT
TGTATTATGTGGTTTGACAGCATTAGTGATTGTATTAGAAGGATTTGCAAAAATAAAGAT
TATTCGTTTAGCAGTTACAGATGCAGTAACATTGGTTCAATTATTCTTTAGTGTAATATG
TTTTGTAACATCAAGAGCCACCCAAAAAATGCAAGATGAAGAAGAGGAAGCACTTCATGG
TGTTAAAAAACAAGAACTCCAACCAACTAATTCTGCTGCATCAACTCCATCTTCTGCTCC
ACCATGTTATATTGTTGATGAGAAAAAAGATTCTGCTTCTCCATCTGGTCAATCTAAAGA
TTCTGAACCTTCAGCAGTTTTACCAGCTTAAATATTTTTAAAAAATTTTTAAAAATAATA
AAAAACAATAATAATAATTTTATAATACTAAAAAA