>SLK826 (SLK826Q) /CSM/SL/SLK8-B/SLK826Q.Seq.d/
GTATCATCAATTCAATTATCAATTAGACAAATTGATATTAAATTAAATTTCCTATGGTTT
TTAGAAGGTAAAGGATTGATACAAGAATGTTTAGTCAATGGTGTTAGAGGATTAATTGAT
AGAAGAACCGAAGGTATCAATTGGAATAAAAATATGGTTTATCCAAGAAGAAAGAAAATG
TCTGGTGATTTTGAATTTGAAAAATTGGAAGTACGTGATCTATTCGTTACAATGTATTTA
CCTGATAAAAGTTATAGACCATTACCAATTTCAATCTATCATTTAGAAAGTGATAGATTT
AGAAAACAATGGATGCTATTAGACTTAATCTCTTGTAAAAGTATTGTTGGTAAATTTGAT
AATTCTTTATTCACTCTCACAATTCCACAACATCATCGTCAATTCAATATAGAACAAGAA
GATCTACTATCAATGAAATTAAAACAACTAACTTCAAATAATAATCAAAATTTTAGAAAT
CATGATAATTATTATAATTATATAACTGAACCATCTGATAATTTATTTTTAACTCAATCA
AATTCACAAATTGATAATTATAATAGTAATAATAATAATAATAGTAATTTTATTGATAAT
AATTCAGAAATTAATAATAATAATTTTGGAGAAAAAAGATTATCAAAAAATAAATTAACA
AAAAAGAAAAGAGATGAAAAGATTGAATATAGAGAATTAAAGATTGATGGATTAAATACT
GATATACTTAGTAGAAATGCAACAGGACCATTGGGTTGGATTAAAGAGGGTACTTTTGAT
ATTGACCTTTTAATTTTATTACCAAATCATATGGATGATAACGAAAAAGAACTTTTATCA
ACTGAACAAGTTGAATATGGTATTATTCCACCTTCATCAGAGAATCCAXXXXXXXXXXCT
ATATAGTGTTGCTCCATTATATACACCAGAGATATCCTATATTTCAAATGCATTGGCTCA
TCCAATAGTTGCTTACATCAATTCTCATTCAAAACATATACCATTATCTTTTAAATTTGC
AATGAATGTACGTCAATTCAATGGATCTTGGACACCAAGTCAAGCTTGTTTCTGGGAAAT
GATCTCTGCAAGTGTTTATGCTGAACTCTTAAAAAAAGTACAAGAAACTAAAAATGTAAC
AACCCTTAAAAAGGTTGCTTCAGATTTGGTTAATGATTTAGTTCAATGGATTGCTCCTCA
TTTACAAGCAATTCATTATCAAC

VSSIQLSIRQIDIKLNFLWFLEGKGLIQECLVNGVRGLIDRRTEGINWNKNMVYPRRKKM
SGDFEFEKLEVRDLFVTMYLPDKSYRPLPISIYHLESDRFRKQWMLLDLISCKSIVGKFD
NSLFTLTIPQHHRQFNIEQEDLLSMKLKQLTSNNNQNFRNHDNYYNYITEPSDNLFLTQS
NSQIDNYNSNNNNNSNFIDNNSEINNNNFGEKRLSKNKLTKKKRDEKIEYRELKIDGLNT
DILSRNATGPLGWIKEGTFDIDLLILLPNHMDDNEKELLSTEQVEYGIIPPSSENP---

---LYSVAPLYTPEISYISNALAHPIVAYINSHSKHIPLSFKFAMNVRQFNGSWTPSQAC
FWEMISASVYAELLKKVQETKNVTTLKKVASDLVNDLVQWIAPHLQAIHYQ

Frame A:
VSSIQLSIRQIDIKLNFLWFLEGKGLIQECLVNGVRGLIDRRTEGINWNKNMVYPRRKKM
SGDFEFEKLEVRDLFVTMYLPDKSYRPLPISIYHLESDRFRKQWMLLDLISCKSIVGKFD
NSLFTLTIPQHHRQFNIEQEDLLSMKLKQLTSNNNQNFRNHDNYYNYITEPSDNLFLTQS
NSQIDNYNSNNNNNSNFIDNNSEINNNNFGEKRLSKNKLTKKKRDEKIEYRELKIDGLNT
DILSRNATGPLGWIKEGTFDIDLLILLPNHMDDNEKELLSTEQVEYGIIPPSSENP---

---LYSVAPLYTPEISYISNALAHPIVAYINSHSKHIPLSFKFAMNVRQFNGSWTPSQAC
FWEMISASVYAELLKKVQETKNVTTLKKVASDLVNDLVQWIAPHLQAIHYQ

Frame B:
yhqfnyqldkliln*isygf*kvkd*yknv*smvled*lieepkvsigikiwfiqeerkc
lvilnlknwkyviyslqciylikvidhyqfqsii*kvidlenngcy*t*slvkvllvnli
ilyslsqfhniivnsi*nkkiyyq*n*nn*lqiiikileimiiiiii*lnhliiyf*lnq
ihkliiiiviiiiivilliiiqkliiiilekkdyqkin*qkrkemkrlnien*rlmd*il
iylvemqqdhwvglkrvlliltf*fyyqiiwmitkknfyqlnklnmvlfhlhqri---

---yivllhyihqrypifqmhwliq*lltsiliqniyhyllnlq*myvnsmdlghqvklv
sgk*slqvfmlns*kkykklkm*qplkrllqiwlmi*fngllliykqfiin

Frame C:
iinsiin*tn*y*ikfpmvfrr*ridtrmfsqwc*rin**knrryqle*kyglskkkenv
w*f*i*kigst*sirynvft**kl*titnfnlsfrk**i*ktmdairlnll*kycw*i**
ffihshnsttsssiqyrtrrstineikttnfk**skf*ks**ll*lyn*ti**fifnsik
ftn**l*********fy***frn****fwrkkiikk*inkkekr*kd*i*rikd*wiky*
yt**kcnrtigld*rgyf*y*pfnfitksyg**rkrtfin*ts*iwyystfires---

---i*ccsiiytrdilyfkcigssnsclhqfsfktytiif*icnectsiqwildtksslf
lgndlckclc*tlkkstrn*kcnnp*kgcfrfg**fssmdcssftsnsls

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SLK826 (SLK826Q) /CSM/SL/SLK8-B/SLK826Q.Seq.d/                       1084   0.0
AFE560 (AFE560Q) /CSM/AF/AFE5-C/AFE560Q.Seq.d/                        504   e-141
AFM705 (AFM705Q) /CSM/AF/AFM7-A/AFM705Q.Seq.d/                         40   0.078
VSG404 (VSG404Q) /CSM/VS/VSG4-A/VSG404Q.Seq.d/                         38   0.31
SSG333 (SSG333Q) /CSM/SS/SSG3-B/SSG333Q.Seq.d/                         38   0.31
SSF550 (SSF550Q) /CSM/SS/SSF5-C/SSF550Q.Seq.d/                         38   0.31
SSE105 (SSE105Q) /CSM/SS/SSE1-A/SSE105Q.Seq.d/                         38   0.31
SSB285 (SSB285Q) /CSM/SS/SSB2-D/SSB285Q.Seq.d/                         38   0.31
SLH405 (SLH405Q) /CSM/SL/SLH4-A/SLH405Q.Seq.d/                         38   0.31
FC-AB25 (FC-AB25Q) /CSM/FC/FC-AB/FC-AB25Q.Seq.d/                       38   0.31

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

AC116984|AC116984.2 Dictyostelium discoideum chromosome 2 map 2567470-3108875 strain AX4, complete sequence.    36   3e-07  25
AL929352|AL929352.1 Plasmodium falciparum strain 3D7, chromosome 5, segment 2/4.    38   2e-06  17
AC116982|AC116982.2 Dictyostelium discoideum chromosome 2 map 3622643-3879522 strain AX4, complete sequence.    38   5e-06  20
AL445564|AL445564.1 Mycoplasma pulmonis (strain UAB CTIP) complete genome; segment 2/3.    32   1e-05  19
AC116551|AC116551.2 Dictyostelium discoideum chromosome 2 map complement(581327-427576) strain AX4, complete sequence.    34   1e-05  15
AC116986|AC116986.2 Dictyostelium discoideum chromosome 2 map 2234041-2567370 strain AX4, complete sequence.    36   2e-05  19
AE014848|AE014848.1 Plasmodium falciparum 3D7 chromosome 12, section 5 of 9 of the complete sequence.    34   2e-05  16
AL929354|AL929354.1 Plasmodium falciparum strain 3D7, chromosome 5, segment 4/4.    36   2e-05  16
AC116988|AC116988.2 Dictyostelium discoideum chromosome 2 map 6445720-6776760 strain AX4, complete sequence.    40   3e-05  21
AC116920|AC116920.2 Dictyostelium discoideum chromosome 2 map 3879572-4071762 strain AX4, complete sequence.    34   4e-05  15

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE017351_161(AE017351|pid:none) Cryptococcus neoformans var. neo...   101   6e-20
CR380959_314(CR380959|pid:none) Candida glabrata strain CBS138 c...    95   4e-18
CR382131_45(CR382131|pid:none) Yarrowia lipolytica strain CLIB12...    94   1e-17
(P38880) RecName: Full=Mitochondrial distribution and morphology...    94   1e-17
CU633448_186(CU633448|pid:none) Podospora anserina genomic DNA c...    90   2e-16
AE016815_145(AE016815|pid:none) Ashbya gossypii (= Eremothecium ...    87   9e-16
CP000500_162(CP000500|pid:none) Pichia stipitis CBS 6054 chromos...    86   3e-15
CR382122_174(CR382122|pid:none) Kluyveromyces lactis strain NRRL...    83   2e-14
CR382136_347(CR382136|pid:none) Debaryomyces hansenii strain CBS...    75   6e-13
FM992688_272(FM992688|pid:none) Candida dubliniensis CD36 chromo...    77   1e-12

 psg: 0.61  gvh: 0.55  alm: 0.43  top: 0.53  tms: 0.00  mit: 0.23  mip: 0.03
 nuc: 0.17  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 44.0 %: nuclear
	 32.0 %: cytoplasmic
	 12.0 %: cytoskeletal
	  8.0 %: vesicles of secretory system
	  4.0 %: mitochondrial

>> prediction for SLK826 is nuc

>SLK826F.Seq
GTATCATCAATTCAATTATCAATTAGACAAATTGATATTAAATTAAATTTCCTATGGTTT
TTAGAAGGTAAAGGATTGATACAAGAATGTTTAGTCAATGGTGTTAGAGGATTAATTGAT
AGAAGAACCGAAGGTATCAATTGGAATAAAAATATGGTTTATCCAAGAAGAAAGAAAATG
TCTGGTGATTTTGAATTTGAAAAATTGGAAGTACGTGATCTATTCGTTACAATGTATTTA
CCTGATAAAAGTTATAGACCATTACCAATTTCAATCTATCATTTAGAAAGTGATAGATTT
AGAAAACAATGGATGCTATTAGACTTAATCTCTTGTAAAAGTATTGTTGGTAAATTTGAT
AATTCTTTATTCACTCTCACAATTCCACAACATCATCGTCAATTCAATATAGAACAAGAA
GATCTACTATCAATGAAATTAAAACAACTAACTTCAAATAATAATCAAAATTTTAGAAAT
CATGATAATTATTATAATTATATAACTGAACCATCTGATAATTTATTTTTAACTCAATCA
AATTCACAAATTGATAATTATAATAGTAATAATAATAATAATAGTAATTTTATTGATAAT
AATTCAGAAATTAATAATAATAATTTTGGAGAAAAAAGATTATCAAAAAATAAATTAACA
AAAAAGAAAAGAGATGAAAAGATTGAATATAGAGAATTAAAGATTGATGGATTAAATACT
GATATACTTAGTAGAAATGCAACAGGACCATTGGGTTGGATTAAAGAGGGTACTTTTGAT
ATTGACCTTTTAATTTTATTACCAAATCATATGGATGATAACGAAAAAGAACTTTTATCA
ACTGAACAAGTTGAATATGGTATTATTCCACCTTCATCAGAGAATCCANNNNNNNNNN

>SLK826Z.Seq
----------CTATATAGTGTTGCTCCATTATATACACCAGAGATATCCTATATTTCAAA
TGCATTGGCTCATCCAATAGTTGCTTACATCAATTCTCATTCAAAACATATACCATTATC
TTTTAAATTTGCAATGAATGTACGTCAATTCAATGGATCTTGGACACCAAGTCAAGCTTG
TTTCTGGGAAATGATCTCTGCAAGTGTTTATGCTGAACTCTTAAAAAAAGTACAAGAAAC
TAAAAATGTAACAACCCTTAAAAAGGTTGCTTCAGATTTGGTTAATGATTTAGTTCAATG
GATTGCTCCTCATTTACAAGCAATTCATTATCAAC

>SLK826P.Seq
GTATCATCAATTCAATTATCAATTAGACAAATTGATATTAAATTAAATTTCCTATGGTTT
TTAGAAGGTAAAGGATTGATACAAGAATGTTTAGTCAATGGTGTTAGAGGATTAATTGAT
AGAAGAACCGAAGGTATCAATTGGAATAAAAATATGGTTTATCCAAGAAGAAAGAAAATG
TCTGGTGATTTTGAATTTGAAAAATTGGAAGTACGTGATCTATTCGTTACAATGTATTTA
CCTGATAAAAGTTATAGACCATTACCAATTTCAATCTATCATTTAGAAAGTGATAGATTT
AGAAAACAATGGATGCTATTAGACTTAATCTCTTGTAAAAGTATTGTTGGTAAATTTGAT
AATTCTTTATTCACTCTCACAATTCCACAACATCATCGTCAATTCAATATAGAACAAGAA
GATCTACTATCAATGAAATTAAAACAACTAACTTCAAATAATAATCAAAATTTTAGAAAT
CATGATAATTATTATAATTATATAACTGAACCATCTGATAATTTATTTTTAACTCAATCA
AATTCACAAATTGATAATTATAATAGTAATAATAATAATAATAGTAATTTTATTGATAAT
AATTCAGAAATTAATAATAATAATTTTGGAGAAAAAAGATTATCAAAAAATAAATTAACA
AAAAAGAAAAGAGATGAAAAGATTGAATATAGAGAATTAAAGATTGATGGATTAAATACT
GATATACTTAGTAGAAATGCAACAGGACCATTGGGTTGGATTAAAGAGGGTACTTTTGAT
ATTGACCTTTTAATTTTATTACCAAATCATATGGATGATAACGAAAAAGAACTTTTATCA
ACTGAACAAGTTGAATATGGTATTATTCCACCTTCATCAGAGAATCCA----------CT
ATATAGTGTTGCTCCATTATATACACCAGAGATATCCTATATTTCAAATGCATTGGCTCA
TCCAATAGTTGCTTACATCAATTCTCATTCAAAACATATACCATTATCTTTTAAATTTGC
AATGAATGTACGTCAATTCAATGGATCTTGGACACCAAGTCAAGCTTGTTTCTGGGAAAT
GATCTCTGCAAGTGTTTATGCTGAACTCTTAAAAAAAGTACAAGAAACTAAAAATGTAAC
AACCCTTAAAAAGGTTGCTTCAGATTTGGTTAATGATTTAGTTCAATGGATTGCTCCTCA
TTTACAAGCAATTCATTATCAAC