>SLK819 (SLK819Q) /CSM/SL/SLK8-A/SLK819Q.Seq.d/
AATTACACCAACAACAACAACACCAAAGTGGATGAAAGTAATAGTAATGATAATATTTTG
TTAAGTCAAACCATAGATACTATTACCGAAAATCATAGCGATGGAACACTTGACATGAAA
ATCCCACTTTTTATTCATAGCTATTCACCATTGAATTGCTTCAATGGCTCTGAACCATTG
ACACCTCCAATACGTACTCATAATCCAATAACTNTGAACCAAGCATTCACCGAAAGCGAT
CTATTCCAACAAGGCGTTGAGCTTGGTTTACTATCAATTTCACCACCACCAACACTTTCA
ATTAGTAAACAGTTTAAATCTGCANCCTTATTTTAATAAATATTAAAAAAAAAAAAA

NYTNNNNTKVDESNSNDNILLSQTIDTITENHSDGTLDMKIPLFIHSYSPLNCFNGSEPL
TPPIRTHNPITXNQAFTESDLFQQGVELGLLSISPPPTLSISKQFKSAXLF**ilkkkk

Frame A:
NYTNNNNTKVDESNSNDNILLSQTIDTITENHSDGTLDMKIPLFIHSYSPLNCFNGSEPL
TPPIRTHNPITXNQAFTESDLFQQGVELGLLSISPPPTLSISKQFKSAXLF**ilkkkk


Frame B:
itpttttpkwmkvivmiifc*vkp*illpkiiamehlt*kshflfiaihh*iasmalnh*
hlqyvliiq*l*tkhspkaiysnkalslvyyqfhhhqhfqlvnslnlxpyfnky*kkk


Frame C:
lhqqqqhqsg*k*****yfvksnhryyyrks*rwnt*henptfys*lftiellqwl*tid
tsntys*snnxepsihrkrsiptrr*awftinftttntfn**tv*icxlilinikkkk

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SLK819 (SLK819Q) /CSM/SL/SLK8-A/SLK819Q.Seq.d/                        670   0.0
SSF346 (SSF346Q) /CSM/SS/SSF3-B/SSF346Q.Seq.d/                         82   6e-15
VSA412 (VSA412Q) /CSM/VS/VSA4-A/VSA412Q.Seq.d/                         44   0.001
VHO185 (VHO185Q) /CSM/VH/VHO1-D/VHO185Q.Seq.d/                         44   0.001
VHE433 (VHE433Q) /CSM/VH/VHE4-B/VHE433Q.Seq.d/                         44   0.001
VFO280 (VFO280Q) /CSM/VF/VFO2-D/VFO280Q.Seq.d/                         44   0.001
VFL394 (VFL394Q) /CSM/VF/VFL3-D/VFL394Q.Seq.d/                         44   0.001
VFL127 (VFL127Q) /CSM/VF/VFL1-B/VFL127Q.Seq.d/                         44   0.001
VFC496 (VFC496Q) /CSM/VF/VFC4-D/VFC496Q.Seq.d/                         44   0.001
VFC437 (VFC437Q) /CSM/VF/VFC4-B/VFC437Q.Seq.d/                         44   0.001

                                                               Score     E
Sequences producing significant alignments:                    (bits)  Value  N

AC116986|AC116986.2 Dictyostelium discoideum chromosome 2 map 2234041-2567370 strain AX4, complete sequence.   626  e-178  2
AC115684|AC115684.2 Dictyostelium discoideum chromosome 2 map 3108975-3191114 strain AX4, complete sequence.    44  0.016  2
BZ244396|BZ244396.1 CH230-261E2.TJ CHORI-230 Segment 2 Rattus norvegicus genomic clone CH230-261E2, DNA sequence.    40  0.032  2
AL929576|AL929576.7 Zebrafish DNA sequence from clone CH211-188M17.    34  0.037  4
AC130173|AC130173.6 Rattus norvegicus clone CH230-11D24, *** SEQUENCING IN PROGRESS ***, 7 unordered pieces.    48  0.072  1
BZ122899|BZ122899.1 CH230-451I2.TV CHORI-230 Segment 2 Rattus norvegicus genomic clone CH230-451I2, DNA sequence.    48  0.072  1
AC117080|AC117080.2 Dictyostelium discoideum chromosome 2 map complement(821514-735598) strain AX4, complete sequence.    36  0.085  4
AC129957|AC129957.2 Mus musculus clone RP24-164P4, WORKING DRAFT SEQUENCE, 9 unordered pieces.    38  0.10  4
BM637644|BM637644.1 17000687564914 A.Gam.ad.cDNA1 Anopheles gambiae cDNA clone 19600449661474 5', mRNA sequence.    40  0.11  2
AC114318|AC114318.2 Homo sapiens chromosome 5 clone RP11-425E13, complete sequence.    46  0.11  2

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

(Q86IW1) RecName: Full=Uncharacterized protein DDB_G0274353;  &A...   178   6e-44
(Q54BF0) RecName: Full=Probable serine/threonine-protein kinase ...    37   0.22
FN357412_14(FN357412|pid:none) Schistosoma mansoni genome sequen...    35   1.1
U66912_1(U66912|pid:none) Dictyostelium discoideum ORF DG1016 ge...    35   1.1
AY220914_1(AY220914|pid:none) Dictyostelium discoideum ComB (com...    35   1.1
AC115680_22(AC115680|pid:none) Dictyostelium discoideum chromoso...    35   1.1
AC115598_3(AC115598|pid:none) Dictyostelium discoideum chromosom...    34   1.9
AC115680_26(AC115680|pid:none) Dictyostelium discoideum chromoso...    33   2.4
AC117081_30(AC117081|pid:none) Dictyostelium discoideum chromoso...    33   2.4
(O00841) RecName: Full=Putative transcriptional regulator cudA;        33   3.2

 psg: 0.47  gvh: 0.48  alm: 0.45  top: 0.53  tms: 0.00  mit: 0.20  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 48.0 %: cytoplasmic
	 32.0 %: nuclear
	  8.0 %: vesicles of secretory system
	  4.0 %: cytoskeletal
	  4.0 %: mitochondrial
	  4.0 %: vacuolar

>> prediction for SLK819 is cyt

>SLK819F.Seq
AATTACACCAACAACAACAACACCAAAGTGGATGAAAGTAATAGTAATGATAATATTTTG
TTAAGTCAAACCATAGATACTATTACCGAAAATCATAGCGATGGAACACTTGACATGAAA
ATCCCACTTTTTATTCATAGCTATTCACCATTGAATTGCTTCAATGGCTCTGAACCATTG
ACACCTCCAATACGTACTCATAATCCAATAACTATGAACCAAGCATTCACC---------
-

>SLK819Z.Seq
----------CGTACTCATAATCCAATAACTTTGAACCAAGCATTCACCGAAAGCGATCT
ATTCCAACAAGGCGTTGAGCTTGGTTTACTATCAATTTCACCACCACCAACACTTTCAAT
TAGTAAACAGTTTAAATCTGCANCCTTATTTTAATAAATATTAAAAAAAAAAAAA

>SLK819P.Seq
AATTACACCAACAACAACAACACCAAAGTGGATGAAAGTAATAGTAATGATAATATTTTG
TTAAGTCAAACCATAGATACTATTACCGAAAATCATAGCGATGGAACACTTGACATGAAA
ATCCCACTTTTTATTCATAGCTATTCACCATTGAATTGCTTCAATGGCTCTGAACCATTG
ACACCTCCAATACGTACTCATAATCCAATAACTATGAACCAAGCATTCACC---------
-CGTACTCATAATCCAATAACTTTGAACCAAGCATTCACCGAAAGCGATCTATTCCAACA
AGGCGTTGAGCTTGGTTTACTATCAATTTCACCACCACCAACACTTTCAATTAGTAAACA
GTTTAAATCTGCANCCTTATTTTAATAAATATTAAAAAAAAAAAAA

>SLK819E.Seq
AATTACACCAACAACAACAACACCAAAGTGGATGAAAGTAATAGTAATGATAATATTTTG
TTAAGTCAAACCATAGATACTATTACCGAAAATCATAGCGATGGAACACTTGACATGAAA
ATCCCACTTTTTATTCATAGCTATTCACCATTGAATTGCTTCAATGGCTCTGAACCATTG
ACACCTCCAATACGTACTCATAATCCAATAACTNTGAACCAAGCATTCACCGAAAGCGAT
CTATTCCAACAAGGCGTTGAGCTTGGTTTACTATCAATTTCACCACCACCAACACTTTCA
ATTAGTAAACAGTTTAAATCTGCANCCTTATTTTAATAAATATTAAAAAAAAAAAAA