>SLK556 (SLK556Q) /CSM/SL/SLK5-C/SLK556Q.Seq.d/
XXXXXXXXXXTTGGTTTCCCATCCATCTGTATTCATCGTGACCTCGATCAAAAGGATCGT
ATCGAACAATACCGTAAATTCAAAAACTTTGAATCTCGTATCATGGTTGCCACTAATATC
TTTGGTCGTGGTATCGATATTGAACGTGTCAATGTCGTCATCAACTACGATATGGCTGAA
TCTGCCGATACCTATCTTCACAGAGTAGGTCGTGCTGGTCGTTTTGGTNCCAAGGGTTTA
GCCATTTCTTTTGTTCCTTCAAAAGAAGATCCAGTACTTGAACAAGTTCAATCTAAATTT
GTTGTTTCAATTAAAGAACTTGTTGCAACCCCAGATCCAAGTACTTATATGTCTGGTTAA
AAAAAAAAAAAAAAAAAAAAAAAAACCTTTTTGTTTTAAAATCCATAAAAAAAAAATAAA
AAAAAAAATAAATAAATATCAAGTTAAATTTTAAATTGTTTTTAAAATAT

---GFPSICIHRDLDQKDRIEQYRKFKNFESRIMVATNIFGRGIDIERVNVVINYDMAES
ADTYLHRVGRAGRFGXKGLAISFVPSKEDPVLEQVQSKFVVSIKELVATPDPSTYMSG*k
kkkkkkktflf*np*kknkkknk*iss*ilncf*n

Frame A:
---wfpihlyss*prskgsyrtip*iqkl*isyhgch*ylwswyry*tcqcrhqlryg*i
crylssqsrscwsfwxqgfshffcsfkrrsst*tssi*iccfn*rtccnprskylyvwlk
kkkkkkknlfvlksikkk*kkk*iniklnfklflky


Frame B:
---GFPSICIHRDLDQKDRIEQYRKFKNFESRIMVATNIFGRGIDIERVNVVINYDMAES
ADTYLHRVGRAGRFGXKGLAISFVPSKEDPVLEQVQSKFVVSIKELVATPDPSTYMSG*k
kkkkkkktflf*np*kknkkknk*iss*ilncf*n


Frame C:
---vshpsvfivtsikrivsnntvnsktlnlvswlplislvvvsilnvsmsssttiwlnl
pipifte*vvlvvlvprv*pfllflqkkiqylnkfnlnllfqlknllqpqiqvliclvkk
kkkkkkkpfcfkihkkkikkkinkyqvkf*ivfki

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SSJ233 (SSJ233Q) /CSM/SS/SSJ2-B/SSJ233Q.Seq.d/                        684   0.0
SLK556 (SLK556Q) /CSM/SL/SLK5-C/SLK556Q.Seq.d/                        684   0.0
SLH648 (SLH648Q) /CSM/SL/SLH6-B/SLH648Q.Seq.d/                        684   0.0
SLE767 (SLE767Q) /CSM/SL/SLE7-C/SLE767Q.Seq.d/                        684   0.0
FC-AI06 (FC-AI06Q) /CSM/FC/FC-AI/FC-AI06Q.Seq.d/                      684   0.0
AFL695 (AFL695Q) /CSM/AF/AFL6-D/AFL695Q.Seq.d/                        652   0.0
SLH870 (SLH870Q) /CSM/SL/SLH8-C/SLH870Q.Seq.d/                        555   e-157
VFA314 (VFA314Q) /CSM/VF/VFA3-A/VFA314Q.Seq.d/                        529   e-149
AFE253 (AFE253Q) /CSM/AF/AFE2-C/AFE253Q.Seq.d/                        523   e-148
AFJ724 (AFJ724Q) /CSM/AF/AFJ7-A/AFJ724Q.Seq.d/                        498   e-140

                                                               Score     E
Sequences producing significant alignments:                    (bits)  Value  N

AW715373|AW715373.1 g4b02nm.f1 Neurospora crassa morning cDNA library Neurospora crassa cDNA clone g4b02nm 5', mRNA sequence.    58  5e-12  2
AW724145|AW724145.1 f4b06nm.f2 Neurospora crassa morning cDNA library Neurospora crassa cDNA clone f4b06nm 5', mRNA sequence.    58  6e-12  2
AW724144|AW724144.1 f4b06nm.f1 Neurospora crassa morning cDNA library Neurospora crassa cDNA clone f4b06nm 5', mRNA sequence.    58  6e-12  2
BF936994|BF936994.1 EST460049 Schistosoma mansoni female, Phil LoVerde/Joe Merrick Schistosoma mansoni cDNA clone SMFCE26 5' end, mRNA sequence.    74  2e-09  1
BU644931|BU644931.2 mgns017xE16f.b Magnaporthe grisea NS Uni-Zap XR Library Magnaporthe grisea cDNA clone mgns017xE16 5', mRNA sequence.    48  2e-07  2
BM871944|BM871944.2 mgmy001xI17f.b Magnaporthe grisea MY Uni-Zap XR Library Magnaporthe grisea cDNA clone mgmy001xI17 5', mRNA sequence.    48  3e-07  2
AQ398195|AQ398195.1 mgxb0007I17f CUGI Rice Blast BAC Library Magnaporthe grisea genomic clone mgxb0007I17f, genomic survey sequence.    48  3e-07  2
AA415064|AA415064.1 Mg0011 RCW Lambda Zap Express Library Pyricularia grisea cDNA clone RCW11 3' similar to Eukaryotic Initiation Factor 4A (EIF-4), mRNA sequence.    48  3e-07  2
CD033297|CD033297.1 mgmt012xE12f.b Mated culture Magnaporthe grisea cDNA clone mgmt012xE12 5', mRNA sequence.    48  4e-07  2
CD033621|CD033621.1 mgmt013xG04f.b Mated culture Magnaporthe grisea cDNA clone mgmt013xG04 5', mRNA sequence.    48  4e-07  2

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR940352_341(CR940352|pid:none) Theileria annulata strain Ankara...   151   6e-36
(Q5KNA3) RecName: Full=ATP-dependent RNA helicase SUB2;         ...   149   3e-35
AE017341_712(AE017341|pid:none) Cryptococcus neoformans var. neo...   149   3e-35
AK221273_1(AK221273|pid:none) Arabidopsis thaliana mRNA for DEAD...   146   2e-34
(Q56XG6) RecName: Full=DEAD-box ATP-dependent RNA helicase 15;  ...   146   2e-34
AJ010466_1(AJ010466|pid:none) Arabidopsis thaliana mRNA for DEAD...   146   2e-34
GM694505_1(GM694505|pid:none) Sequence 61 from Patent EP1953235....   146   2e-34
AC150787_5(AC150787|pid:none) Medicago truncatula clone mth2-171...   145   3e-34
GM694469_1(GM694469|pid:none) Sequence 25 from Patent EP1953235.      145   3e-34
BT068295_1(BT068295|pid:none) Zea mays full-length cDNA clone ZM...   145   3e-34

 psg: 0.28  gvh: 0.41  alm: 0.49  top: 0.53  tms: 0.00  mit: 0.20  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 52.0 %: nuclear
	 36.0 %: cytoplasmic
	  4.0 %: cytoskeletal
	  4.0 %: mitochondrial
	  4.0 %: vesicles of secretory system

>> prediction for SLK556 is nuc

>SLK556Z.Seq
----------TTGGTTTCCCATCCATCTGTATTCATCGTGACCTCGATCAAAAGGATCGT
ATCGAACAATACCGTAAATTCAAAAACTTTGAATCTCGTATCATGGTTGCCACTAATATC
TTTGGTCGTGGTATCGATATTGAACGTGTCAATGTCGTCATCAACTACGATATGGCTGAA
TCTGCCGATACCTATCTTCACAGAGTAGGTCGTGCTGGTCGTTTTGGTNCCAAGGGTTTA
GCCATTTCTTTTGTTCCTTCAAAAGAAGATCCAGTACTTGAACAAGTTCAATCTAAATTT
GTTGTTTCAATTAAAGAACTTGTTGCAACCCCAGATCCAAGTACTTATATGTCTGGTTAA
AAAAAAAAAAAAAAAAAAAAAAAAACCTTTTTGTTTTAAAATCCATAAAAAAAAAATAAA
AAAAAAAATAAATAAATATCAAGTTAAATTTTAAATTGTTTTTAAAATAT