>SLK346 (SLK346Q) /CSM/SL/SLK3-B/SLK346Q.Seq.d/
XXXXXXXXXXTGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTT
TTTACGGTTNCTGGCCGCTNTAGAGGATCTCAAGCTTACGTACGNGTCCCATGNNACGTT
TATAGTTTTTGTAGGNCNTGCGNATNGAAA

---LVRGAEPMEKRQQRGLFTVXGRXRGSQAYVRVPXXVYSFCRXCXXK

Frame A:
---arqgggaygktpatrpfygxwpl*risslrtxpmxrl*fl*xxrxe


Frame B:
---LVRGAEPMEKRQQRGLFTVXGRXRGSQAYVRVPXXVYSFCRXCXXK


Frame C:
---ssggrslwknasnaaflrxlaaxedlkltyxshxtfivfvgxaxx

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SLK346 (SLK346Q) /CSM/SL/SLK3-B/SLK346Q.Seq.d/                        224   3e-58
SLD841 (SLD841Q) /CSM/SL/SLD8-B/SLD841Q.Seq.d/                         40   0.009
SLF193 (SLF193Q) /CSM/SL/SLF1-D/SLF193Q.Seq.d/                         32   2.1
VFL612 (VFL612Q) /CSM/VF/VFL6-A/VFL612Q.Seq.d/                         30   8.3
VFA513 (VFA513Q) /CSM/VF/VFA5-A/VFA513Q.Seq.d/                         30   8.3

                                                               Score     E
Sequences producing significant alignments:                    (bits)  Value  N

BI793708|BI793708.1 ie37c04.x1 Kaestner ngn3 wt Mus musculus cDNA 3' similar to TR:Q51613 Q51613 13.8 KD ORF. ;, mRNA sequence.   145  1e-33  2
BI677403|BI677403.1 ie28e04.x1 Kaestner ngn3 wt Mus musculus cDNA 3' similar to TR:Q51613 Q51613 13.8 KD ORF. ;, mRNA sequence.   145  8e-33  2
BI840642|BI840642.1 fq53a08.x1 Zebrafish adult olfactory Danio rerio cDNA clone 4879407 3' similar to TR:Q51613 Q51613 13.8 KD ORF. ;, mRNA sequence.   125  1e-27  2
BI809853|BI809853.1 G003G10 Oryza sativa mature leaf library induced by M.grisea Oryza sativa cDNA clone G003G10, mRNA sequence.   125  2e-27  2
AJ281661|AJ281661.1 Anopheles gambiae EST 4A3A-P8G10-F.          129  9e-27  1
U12390|U12390.1 Cloning vector pSport1, complete cds.            125  1e-26  2
U12391|U12391.1 Cloning vector pSport2, complete sequence.       125  1e-26  2
AX771237|AX771237.1 Sequence 6 from Patent WO03014366.           125  1e-26  2
X76682|X76682.1 Plasmid vector pHM3 betalactamase gene.          125  2e-26  2
X76683|X76683.1 Plasmid vector pHM2 betalactamase gene.          125  2e-26  2

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK302803_1(AK302803|pid:none) Homo sapiens cDNA FLJ60984 complet...    49   5e-05
CP001061_9(CP001061|pid:none) Shigella boydii CDC 3083-94 plasmi...    42   0.009
DQ983594_3(DQ983594|pid:none) Cloning vector pOri1, complete seq...    36   0.48

 psg: 0.66  gvh: 0.56  alm: 0.55  top: 0.53  tms: 0.00  mit: 0.23  mip: 0.02
 nuc: 0.00  erl: 0.00  erm: 0.20  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 44.0 %: cytoplasmic
	 36.0 %: nuclear
	 20.0 %: mitochondrial

>> prediction for SLK346 is cyt

>SLK346Z.Seq
----------TGCTCGTCAGGGGGGCGGAGCCTATGGAAAAACGCCAGCAACGCGGCCTT
TTTACGGTTNCTGGCCGCTNTAGAGGATCTCAAGCTTACGTACGNGTCCCATGNNACGTT
TATAGTTTTTGTAGGNCNTGCGNATNGAAA