>SLJ276 (SLJ276Q) /CSM/SL/SLJ2-D/SLJ276Q.Seq.d/
XXXXXXXXXXCACCAAAGAGTTCAAACAACAAAGTAGACGAATTAGATTGACGGAATTTT
TCAGAGGAAAACATCTCTATCAAATAGATTTCTTAAAAAATAATAAGTTAGTAAAATCAA
TAAAGCTTCTCATATATAGTACACATTAAAAAAAAAAAAAAAAA

---TKEFKQQSRRIRLTEFFRGKHLYQIDFLKNNKLVKSIKLLIYSTH*kkkkk

Frame A:
---TKEFKQQSRRIRLTEFFRGKHLYQIDFLKNNKLVKSIKLLIYSTH*kkkkk


Frame B:
---pkssnnkvdeld*rnfseenisik*is*kiis**nq*sfsyivhikkkkk


Frame C:
---qrvqttk*tn*idgifqrktslsnrflkk**vskinkashi*ytlkkkkk

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

VSH436 (VSH436Q) /CSM/VS/VSH4-B/VSH436Q.Seq.d/                        272   1e-72
VSF348 (VSF348Q) /CSM/VS/VSF3-B/VSF348Q.Seq.d/                        272   1e-72
VSA155 (VSA155Q) /CSM/VS/VSA1-C/VSA155Q.Seq.d/                        272   1e-72
VHP266 (VHP266Q) /CSM/VH/VHP2-C/VHP266Q.Seq.d/                        272   1e-72
VFL101 (VFL101Q) /CSM/VF/VFL1-A/VFL101Q.Seq.d/                        272   1e-72
SSK478 (SSK478Q) /CSM/SS/SSK4-D/SSK478Q.Seq.d/                        272   1e-72
SSK476 (SSK476Q) /CSM/SS/SSK4-D/SSK476Q.Seq.d/                        272   1e-72
SSJ888 (SSJ888Q) /CSM/SS/SSJ8-D/SSJ888Q.Seq.d/                        272   1e-72
SSI563 (SSI563Q) /CSM/SS/SSI5-C/SSI563Q.Seq.d/                        272   1e-72
SSF159 (SSF159Q) /CSM/SS/SSF1-C/SSF159Q.Seq.d/                        272   1e-72

                                                               Score     E
Sequences producing significant alignments:                    (bits)  Value  N

X75263|X75263.1 D.discoideum (AX3) mRNA for heat shock cognate protein (hsc70).   272  1e-69  1
L22736|L22736.1 Dictyostelium discoideum heat shock protein (hspB) gene,.   272  1e-69  1
AP004173|AP004173.1 Mycoplasma penetrans genomic DNA, complete sequence, section 4/5.    44  0.47  1
AE011082|AE011082.1 Methanosarcina acetivorans str. C2A, section 427 of 534 of the complete genome.    44  0.47  1
CB823247|CB823247.1 EST 4471 Ripe Apricot Fruit Lambda Zap II Library Prunus armeniaca cDNA clone bh005m14 3', mRNA sequence.    44  0.47  1
AC115548|AC115548.4 Rattus norvegicus clone CH230-244P15, WORKING DRAFT SEQUENCE, 1 ordered piece.    42  1.9  1
AC020611|AC020611.15 Homo sapiens 12 BAC RP11-1029F8 (Roswell Park Cancer Institute Human BAC Library) complete sequence.    42  1.9  1
AC095971|AC095971.6 Rattus norvegicus clone CH230-11F2, *** SEQUENCING IN PROGRESS ***, 5 unordered pieces.    42  1.9  1
AC037464|AC037464.2 Homo sapiens chromosome 6 clone RP11-195B5 map 6, WORKING DRAFT SEQUENCE, 21 unordered pieces.    42  1.9  1
AC127325|AC127325.4 Mus musculus chromosome 9 clone RP23-250E15, complete sequence.    42  1.9  1

 ***** No hits found ******

Lambda     K      H
   0.318    0.134    0.401

Gapped
Lambda     K      H
   0.267   0.0410    0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3159261
Number of Hits to DB: 205,542,018

 psg: 0.56  gvh: 0.15  alm: 0.52  top: 0.53  tms: 0.00  mit: 0.37  mip: 0.00
 nuc: 0.12  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 64.0 %: nuclear
	 16.0 %: cytoplasmic
	 12.0 %: mitochondrial
	  4.0 %: cytoskeletal
	  4.0 %: plasma membrane

>> prediction for SLJ276 is nuc

>SLJ276Z.Seq
----------CACCAAAGAGTTCAAACAACAAAGTAGACGAATTAGATTGACGGAATTTT
TCAGAGGAAAACATCTCTATCAAATAGATTTCTTAAAAAATAATAAGTTAGTAAAATCAA
TAAAGCTTCTCATATATAGTACACATTAAAAAAAAAAAAAAAAA