>SLJ215 (SLJ215Q) /CSM/SL/SLJ2-A/SLJ215Q.Seq.d/
XXXXXXXXXXGCATCAACTGTCGCAACTACAACCTCTGCAACTACTGCAGGTACAACAAC
TGGTGGAACTACAACTGGTGGTTCAACTTCTGATAGTAGTGCTGCTTCCTCAGCCGATAG
TAGCGCTGCCTCCTCATCACCATCAAGCAGTGCTGCTTCAAGTGCCGCTTCAAGTGAACC
ATCAAGTAGCGCCGCTTCAAGTAGTGCTCCATCCTCTGCTTCAAGTAGCGCTCCATCCTC
TGCCTCAAGTAGTGCTCCATCATCATCAGCTTCAAGTTCAGCTGCATCATCAGCTGCAAG
CTCAGAAAGCTCAGAAAGCTCATCAGCCACTTCATAAATAAAACTTTGATCAAAAAAAAA
AAAA

---HQLSQLQPLQLLQVQQLVELQLVVQLLIVVLLPQPIVALPPHHHQAVLLQVPLQVNH
QVAPLQVVLHPLLQVALHPLPQVVLHHHQLQVQLHHQLQAQKAQKAHQPLHK*nfdqkkk

Frame A:
---HQLSQLQPLQLLQVQQLVELQLVVQLLIVVLLPQPIVALPPHHHQAVLLQVPLQVNH
QVAPLQVVLHPLLQVALHPLPQVVLHHHQLQVQLHHQLQAQKAQKAHQPLHK*nfdqkkk


Frame B:
---incrnynlcnycrynnwwnynwwfnf***ccflsr**rcllitikqccfkcrfk*ti
k*rrfk*csilcfk*rsilclk*csiiisfkfsciiscklrklrklishfinktlikkkk


Frame C:
---stvatttsattagtttggtttggstsdssaassadssaassspsssaassaasseps
ssaasssapssasssapssasssapsssasssaassaassessesssats*ikl*skkkk

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SSM203 (SSM203Q) /CSM/SS/SSM2-A/SSM203Q.Seq.d/                        676   0.0
SSG603 (SSG603Q) /CSM/SS/SSG6-A/SSG603Q.Seq.d/                        676   0.0
SSG344 (SSG344Q) /CSM/SS/SSG3-B/SSG344Q.Seq.d/                        676   0.0
SLK616 (SLK616Q) /CSM/SL/SLK6-A/SLK616Q.Seq.d/                        676   0.0
SLJ215 (SLJ215Q) /CSM/SL/SLJ2-A/SLJ215Q.Seq.d/                        676   0.0
SLI751 (SLI751Q) /CSM/SL/SLI7-C/SLI751Q.Seq.d/                        676   0.0
SLI612 (SLI612Q) /CSM/SL/SLI6-A/SLI612Q.Seq.d/                        676   0.0
SLI293 (SLI293Q) /CSM/SL/SLI2-D/SLI293Q.Seq.d/                        676   0.0
SLI237 (SLI237Q) /CSM/SL/SLI2-B/SLI237Q.Seq.d/                        676   0.0
SLI174 (SLI174Q) /CSM/SL/SLI1-D/SLI174Q.Seq.d/                        676   0.0

                                                               Score     E
Sequences producing significant alignments:                    (bits)  Value  N

D13973|D13973.1 Dictyostelium discoideum DNA for Dp87 protein, complete cds.   676  0.0  4
BG917161|BG917161.1 602816607F1 NCI_CGAP_Mam6 Mus musculus cDNA clone IMAGE:4945728 5', mRNA sequence.    32  3.5  3
AC121560|AC121560.4 Mus musculus clone RP24-398G11, WORKING DRAFT SEQUENCE, 10 unordered pieces.    42  4.5  1
AC092893|AC092893.4 Homo sapiens chromosome 3 clone RP11-203I19, WORKING DRAFT SEQUENCE, 28 unordered pieces.    42  4.5  1
CC688776|CC688776.1 OGUJC81TV ZM_0.7_1.5_KB Zea mays genomic clone ZMMBMa0453M17, genomic survey sequence.    42  4.5  1
BF012148|BF012148.1 us38h03.y1 Soares_NMEBA_branchial_arch Mus musculus cDNA clone IMAGE:3169397 5' similar to TR:Q9QYU2 Q9QYU2 ELONGATION FACTOR. ;, mRNA sequence.    42  4.5  1
AA881540|AA881540.1 vx20a07.r1 Soares 2NbMT Mus musculus cDNA clone IMAGE:1264980 5' similar to SW:EFTS_HUMAN P43897 MITOCHONDRIAL ELONGATION FACTOR TS PRECURSOR ;, mRNA sequence.    42  4.5  1
AC131760|AC131760.2 Mus musculus chromosome UNK clone RP24-220M2, WORKING DRAFT SEQUENCE, 6 unordered pieces.    42  4.5  1
BU559811|BU559811.1 AGENCOURT_10353907 NIH_MGC_144 Mus musculus cDNA clone IMAGE:6588705 5', mRNA sequence.    42  4.5  1
AC087128|AC087128.1 Mus musculus clone RP21-491H22, WORKING DRAFT SEQUENCE, 30 unordered pieces.    42  4.5  1

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU247178_1(EU247178|pid:none) Lycosa singoriensis clone LSsin992...    33   3.1

 psg: 0.77  gvh: 0.80  alm: 0.23  top: 0.70  tms: 0.07  mit: 0.26  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 1.00  tyr: 0.00  leu: 0.23  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 1.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 0.00 

	 40.0 %: nuclear
	 28.0 %: cytoplasmic
	 12.0 %: mitochondrial
	  8.0 %: Golgi
	  4.0 %: plasma membrane
	  4.0 %: vesicles of secretory system
	  4.0 %: endoplasmic reticulum

>> prediction for SLJ215 is nuc

>SLJ215Z.Seq
----------GCATCAACTGTCGCAACTACAACCTCTGCAACTACTGCAGGTACAACAAC
TGGTGGAACTACAACTGGTGGTTCAACTTCTGATAGTAGTGCTGCTTCCTCAGCCGATAG
TAGCGCTGCCTCCTCATCACCATCAAGCAGTGCTGCTTCAAGTGCCGCTTCAAGTGAACC
ATCAAGTAGCGCCGCTTCAAGTAGTGCTCCATCCTCTGCTTCAAGTAGCGCTCCATCCTC
TGCCTCAAGTAGTGCTCCATCATCATCAGCTTCAAGTTCAGCTGCATCATCAGCTGCAAG
CTCAGAAAGCTCAGAAAGCTCATCAGCCACTTCATAAATAAAACTTTGATCAAAAAAAAA
AAAA