>SLI833 (SLI833Q) /CSM/SL/SLI8-B/SLI833Q.Seq.d/
CCCACGCGTCCGACTAGTTCTAGATCGCGAGCGGCCGCCCATTTTTTTTTTATTTTTTTT
TTTTTTATTTCACACTTTTATAAATTTATATATTTTTTTGTTTATATATTAAATTTTATA
CTAACTTAAAAAAAAAAAAAAAACAATAATAATAATAAAATTTTAATAATATTAATATAT
TTTTTAAAATAGTTAAATTAAAAATAAAATGGCATTAAATTTTAAAGATAAAGTTGTAAT
TGTTACAGGTGCTGGTGGTGGTATTGGTAAAGXXXXXXXXXXCACTCCATCAGGTTCTGT
CGTTGTCGATGGTTACAATGCTTCAAAGATTTTCACCACCATTCAAGGTAACATTGGTGC
TAAAGGTGCAGAATTAGTAAAGAAAATCAATGGTATCTATTTAATTAACATTAAAAAAGG
TACAAATACCCAAGCTTGGGCTTTAGATTTAAAGAATGGTTCTGGTTCAATTGTTGTTGG
TGCTGGTTCAACTAAACCAAACGTAACAATCACAGTTTCAGATGAAGATTTTGTTGATAT
TATGACTGGTAAATTAAATGCTCAATCTGCTTTCACCAAAGGTAAATTAAAGATTTCTGG
TAATATGGGTTTAGCTACTAAATTAGGTGCATTAATGCAAGGTTCAAAATTATAAAAAAA
AATAATAATAAAAAAAAAAATAAAAATAGAAAATATAAAAAAAAAAAAAAAAAAAA

prvrlvldrerppifflfffflfhtfinlyiflfiy*ily*lkkkkktiiiikf**y*yi
f*ns*IKNKMALNFKDKVVIVTGAGGGIGK---

---TPSGSVVVDGYNASKIFTTIQGNIGAKGAELVKKINGIYLINIKKGTNTQAWALDLK
NGSGSIVVGAGSTKPNVTITVSDEDFVDIMTGKLNAQSAFTKGKLKISGNMGLATKLGAL
MQGSKL*kkiiikkkikienikkkkkk

Frame A:
ptrptssrsraaahfffiffffishfykfiyffvyilnfilt*kkkknnnnnkiliiliy
flk*ln*k*ngikf*r*scncyrcwwwyw*---

---hsirfcrcrwlqcfkdfhhhsr*hwc*rcriskenqwylfn*h*krykypslgfrfk
ewfwfnccwcwfn*tkrnnhsfr*rfc*yydw*ikcsicfhqr*ikdfw*ygfsy*irci
narfkiikknnnkkknknrkykkkkkk

Frame B:
prvrlvldrerppifflfffflfhtfinlyiflfiy*ily*lkkkkktiiiikf**y*yi
f*ns*IKNKMALNFKDKVVIVTGAGGGIGK---

---TPSGSVVVDGYNASKIFTTIQGNIGAKGAELVKKINGIYLINIKKGTNTQAWALDLK
NGSGSIVVGAGSTKPNVTITVSDEDFVDIMTGKLNAQSAFTKGKLKISGNMGLATKLGAL
MQGSKL*kkiiikkkikienikkkkkk

Frame C:
hasd*f*iasgrpfffyffffyftll*iyiffclyikfytnlkkkkkq****nfnninif
fkivklkikwh*ilkikl*llqvlvvvlvk---

---lhqvlslsmvtmlqrfsppfkvtlvlkvqn**rksmvsi*ltlkkvqipklgl*i*r
mvlvqlllvlvqlnqt*qsqfqmkillil*lvn*mlnllspkvn*rflviwv*lln*vh*
ckvqnykkk***kkk*k*ki*kkkkkk

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SLI833 (SLI833Q) /CSM/SL/SLI8-B/SLI833Q.Seq.d/                        759   0.0
VFM420 (VFM420Q) /CSM/VF/VFM4-A/VFM420Q.Seq.d/                        720   0.0
VFF446 (VFF446Q) /CSM/VF/VFF4-B/VFF446Q.Seq.d/                        720   0.0
SLI502 (SLI502Q) /CSM/SL/SLI5-A/SLI502Q.Seq.d/                        720   0.0
SLI456 (SLI456Q) /CSM/SL/SLI4-C/SLI456Q.Seq.d/                        720   0.0
SLI435 (SLI435Q) /CSM/SL/SLI4-B/SLI435Q.Seq.d/                        720   0.0
SLI308 (SLI308Q) /CSM/SL/SLI3-A/SLI308Q.Seq.d/                        720   0.0
SLH821 (SLH821Q) /CSM/SL/SLH8-A/SLH821Q.Seq.d/                        720   0.0
SLH480 (SLH480Q) /CSM/SL/SLH4-D/SLH480Q.Seq.d/                        720   0.0
SLG767 (SLG767Q) /CSM/SL/SLG7-C/SLG767Q.Seq.d/                        720   0.0

                                                               Score     E
Sequences producing significant alignments:                    (bits)  Value  N

AB042104|AB042104.1 Dictyostelium discoideum mfeA mRNA for peroxisomal multifunctional enzyme MFE homolog, complete cds.   720  0.0  2
BM609231|BM609231.1 17000687087868 A.Gam.ad.cDNA.blood1 Anopheles gambiae cDNA clone 19600449680268 5', mRNA sequence.    80  4e-11  1
BG111100|BG111100.1 602281501F1 NIH_MGC_86 Homo sapiens cDNA clone IMAGE:4369032 5', mRNA sequence.    80  4e-11  1
BG409768|BG409768.1 S10-4-C1 Stage 10+ Gastrula Library Xenopus laevis cDNA 5' similar to Xenopus EST da13g05.x1 32C10-1P da79c08.x1 bl94e06.w1, mRNA sequence.    80  4e-11  1
CA792800|CA792800.1 AGENCOURT_10316686 NICHD XGC Emb1 Xenopus laevis cDNA clone IMAGE:5155683 5', mRNA sequence.    80  4e-11  1
BM477544|BM477544.1 AGENCOURT_6484896 NIH_MGC_85 Homo sapiens cDNA clone IMAGE:5554393 5', mRNA sequence.    80  4e-11  1
BU066778|BU066778.1 1610_H10_O20ZT Mature perithecia Gibberella zeae cDNA, mRNA sequence.    80  4e-11  1
BX437525|BX437525.1 human full-length cDNA 5-PRIME end of clone CS0CAP007YE10 of THYMUS  of Homo sapiens (human).    80  4e-11  1
BX503479|BX503479.1 Homo sapiens mRNA; EST DKFZp451E1811_r1  (from clone DKFZp451E1811).    80  4e-11  1
BM584018|BM584018.1 17000687279674 A.Gam.ad.cDNA.blood1 Anopheles gambiae cDNA clone 19600449685532 5', mRNA sequence.    80  4e-11  1

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ243538_1(AJ243538|pid:none) Glomus mosseae fox2 gene for Fox2 ...   102   1e-20
CR859768_1(CR859768|pid:none) Pongo abelii mRNA; cDNA DKFZp469L1...   100   4e-20
X60654_1(X60654|pid:none) Rat mRNA for 58 kDa protein containing...   100   4e-20
AK312856_1(AK312856|pid:none) Homo sapiens cDNA, FLJ93299, highl...   100   4e-20
M34728_1(M34728|pid:none) Rat sterol carrier protein-2 (SCP-2) m...   100   4e-20
DQ000515_1(DQ000515|pid:none) Synthetic construct clone PSF:1039...   100   4e-20
(P11915) RecName: Full=Non-specific lipid-transfer protein;     ...   100   4e-20
U11313_1(U11313|pid:none) Homo sapiens sterol carrier protein-X/...   100   4e-20
M57453_1(M57453|pid:none) Rat sterol carrier protein-x mRNA.          100   4e-20
AK294631_1(AK294631|pid:none) Homo sapiens cDNA FLJ53982 complet...   100   4e-20

 psg: 0.82  gvh: 0.41  alm: 0.47  top: 0.53  tms: 0.00  mit: 0.13  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.20  pox: 1.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 32.0 %: cytoplasmic
	 32.0 %: peroxisomal
	 20.0 %: mitochondrial
	 12.0 %: nuclear
	  4.0 %: cytoskeletal

>> prediction for SLI833 is cyt

>SLI833F.Seq
CCCACGCGTCCGACTAGTTCTAGATCGCGAGCGGCCGCCCATTTTTTTTTTATTTTTTTT
TTTTTTATTTCACACTTTTATAAATTTATATATTTTTTTGTTTATATATTAAATTTTATA
CTAACTTAAAAAAAAAAAAAAAACAATAATAATAATAAAATTTTAATAATATTAATATAT
TTTTTAAAATAGTTAAATTAAAAATAAAATGGCATTAAATTTTAAAGATAAAGTTGTAAT
TGTTACAGGTGCTGGTGGTGGTATTGGTAAAG----------

>SLI833Z.Seq
----------CACTCCATCAGGTTCTGTCGTTGTCGATGGTTACAATGCTTCAAAGATTT
TCACCACCATTCAAGGTAACATTGGTGCTAAAGGTGCAGAATTAGTAAAGAAAATCAATG
GTATCTATTTAATTAACATTAAAAAAGGTACAAATACCCAAGCTTGGGCTTTAGATTTAA
AGAATGGTTCTGGTTCAATTGTTGTTGGTGCTGGTTCAACTAAACCAAACGTAACAATCA
CAGTTTCAGATGAAGATTTTGTTGATATTATGACTGGTAAATTAAATGCTCAATCTGCTT
TCACCAAAGGTAAATTAAAGATTTCTGGTAATATGGGTTTAGCTACTAAATTAGGTGCAT
TAATGCAAGGTTCAAAATTATAAAAAAAAATAATAATAAAAAAAAAAATAAAAATAGAAA
ATATAAAAAAAAAAAAAAAAAAAA

>SLI833P.Seq
CCCACGCGTCCGACTAGTTCTAGATCGCGAGCGGCCGCCCATTTTTTTTTTATTTTTTTT
TTTTTTATTTCACACTTTTATAAATTTATATATTTTTTTGTTTATATATTAAATTTTATA
CTAACTTAAAAAAAAAAAAAAAACAATAATAATAATAAAATTTTAATAATATTAATATAT
TTTTTAAAATAGTTAAATTAAAAATAAAATGGCATTAAATTTTAAAGATAAAGTTGTAAT
TGTTACAGGTGCTGGTGGTGGTATTGGTAAAG----------CACTCCATCAGGTTCTGT
CGTTGTCGATGGTTACAATGCTTCAAAGATTTTCACCACCATTCAAGGTAACATTGGTGC
TAAAGGTGCAGAATTAGTAAAGAAAATCAATGGTATCTATTTAATTAACATTAAAAAAGG
TACAAATACCCAAGCTTGGGCTTTAGATTTAAAGAATGGTTCTGGTTCAATTGTTGTTGG
TGCTGGTTCAACTAAACCAAACGTAACAATCACAGTTTCAGATGAAGATTTTGTTGATAT
TATGACTGGTAAATTAAATGCTCAATCTGCTTTCACCAAAGGTAAATTAAAGATTTCTGG
TAATATGGGTTTAGCTACTAAATTAGGTGCATTAATGCAAGGTTCAAAATTATAAAAAAA
AATAATAATAAAAAAAAAAATAAAAATAGAAAATATAAAAAAAAAAAAAAAAAAAA