AFK532
Library AF
(Link to library)
Clone ID AFK532
Atlas ID -
NBRP ID -
dictyBase ID -
Link to Contig Contig-U16252-1
Original site URL
Representative seq. ID AFK532P
(Link to Original site)
Representative DNA sequence
>AFK532 (AFK532Q) /CSM/AF/AFK5-B/AFK532Q.Seq.d/
ACCCACTTATTACTTTATTTTTTTTTATCTCTATCTATATATATATCATTTTTTAAAATG
AGCGTCATCAAATCAATTAAAGCCAGAGAAATTTTAGATTCACGTGGTAACCCAACTGTT
GAAGTTGACCTTTACACCGAAAAAGATGGTGTTGTTTCATCATTCAGAGCTGCAGTTCCA
TCAGGTGCATCAACTGGTATTTATGAAGCTGTTGAATTAAGAGATGGTGATAAATCAAGA
TACTTAGGTAAAGGTGTACTCAAAGCAATCAAAAACATTCTCGAAGTCATTCAACCAGCC
GTCATTGGTAAATCAGTTTCCGATCAAGCTGCTATCGATAAATTAATGATCGATCTCGAT
GGTACCCCAAATAAAGGTAAATTAGGTGCCAACGCTATCCTTGCAGTCAGTTTAGCTGTT
TGCAGAGCTGGTGCTGCTGATAGAAATTTACCACTTTACAAATATATCTCAGAAATTGCA
GGTACTAAAATGAGATTACCAGTTCCAGCATTCAATGTTATCAATGGGTGGTTCACATGC
AGGTAATAAATTAGCTATGCAAGAATTTATGATTTTACCXXXXXXXXXXANAATTCATTA
AANAANATCCNATCNTTTCAATTGAANATCCNTTTGATCAANATGATTGGGAATCATACC
CTNAATTAACAGCNTCAGTTGANATTCNAANTGTTGGNGATGATTTACTTGNTACCNACC
CANAAANAATTAANACTGGTATTGAAAANAAAGCATGTAATGCTNTTTTATTNAAAGTTA
ACCNAATTGGNTCAGTCNCTGAANCNATTNGNGCCGCTCTTGACNCAAANAANGCNTCAT
GGGGNGTCANGGNTANCCNTCGNTCAGGTGAAACTGAANANACCNTCNNTGCTGANTTAG
NTGTTGGNTTAGGGACCGGNCNAATTAAAACTGGNGCNCCNTGTAGATCAGAAANATT
sequence update 2001. 6. 1
Translated Amino Acid sequence
ptyyfiffylylyiyhflk*assnqlkpekf*ihvvtqllkltftpkkmvlfhhselqfh
qvhqlvfmklln*emvinqdt*vkvyskqsktfsksfnqpslvnqfpikllsin**sism
vpqikvn*vptlslqsv*lfaelvllieiyhftnisqklqvlk*DYQFQHSMLSMGGSHA
GNKLAMQEFMIL---

---XFIKXXPIXSIEXPFDQXDWESYPXLTASVXIXXVGDDLLXTXPXXIXTGIEXKACN
AXLXKVNXIGSVXEXIXAALDXXXASWGVXXXXRSGETEXTXXAXLXVGLGTGXIKTGAP
CRSEX


Translated Amino Acid sequence (All Frames)
Frame A:
thlllyfflslsiyisffkmsviksikareildsrgnptvevdlytekdgvvssfraavp
sgastgiyeavelrdgdksrylgkgvlkaiknileviqpavigksvsdqaaidklmidld
gtpnkgklganailavslavcragaadrnlplykyiseiagtkmrlpvpafnvingwftc
r**isyariydft---

---xih*xxsxxfn*xsx*sx*lgiipxinsxs*xsxcwx*ftxyxpxxn*xwy*kxsm*
cxfixs*pnwxsx*xxxxrs*xkxxxmgxxgxpsxr*n*xxxxc*xxcwxrdrxn*nwxx
x*irxi

Frame B:
ptyyfiffylylyiyhflk*assnqlkpekf*ihvvtqllkltftpkkmvlfhhselqfh
qvhqlvfmklln*emvinqdt*vkvyskqsktfsksfnqpslvnqfpikllsin**sism
vpqikvn*vptlslqsv*lfaelvllieiyhftnisqklqvlk*DYQFQHSMLSMGGSHA
GNKLAMQEFMIL---

---XFIKXXPIXSIEXPFDQXDWESYPXLTASVXIXXVGDDLLXTXPXXIXTGIEXKACN
AXLXKVNXIGSVXEXIXAALDXXXASWGVXXXXRSGETEXTXXAXLXVGLGTGXIKTGAP
CRSEX

Frame C:
plitlfffisiyiyiif*nerhqin*sqrnfrftw*pnc*s*plhrkrwccfiiqscssi
rcinwyl*sc*ikrw**ikilr*rctqsnqkhsrshstsrhw*isfrsscyr*indrsrw
ypk*r*ircqrypcsqfsclqswcc**kfttlqiylrncry*neitsssiqcyqwvvhmq
vin*lcknl*fy---

---nslxxixsfqlxixlixmignhtln*qxqlxfxxlxmiylxptxkxlxlvlkxkhvm
lfyxkltxlxqslxxxxplltqxxxhgxsxxxxxqvklxxpsxlx*xlx*gpxxlklxxx
vdqkx

Homology vs CSM-cDNA

Score E
Sequences producing significant alignments: (bits) Value

AFK532 (AFK532Q) /CSM/AF/AFK5-B/AFK532Q.Seq.d/ 1473 0.0
AFN685 (AFN685Q) /CSM/AF/AFN6-D/AFN685Q.Seq.d/ 1096 0.0
AFN159 (AFN159Q) /CSM/AF/AFN1-C/AFN159Q.Seq.d/ 1096 0.0
AFL547 (AFL547Q) /CSM/AF/AFL5-B/AFL547Q.Seq.d/ 1096 0.0
AFK881 (AFK881Q) /CSM/AF/AFK8-D/AFK881Q.Seq.d/ 1096 0.0
VFL491 (VFL491Q) /CSM/VF/VFL4-D/VFL491Q.Seq.d/ 1088 0.0
SFK804 (SFK804Q) /CSM/SF/SFK8-A/SFK804Q.Seq.d/ 1088 0.0
VFE233 (VFE233Q) /CSM/VF/VFE2-B/VFE233Q.Seq.d/ 1080 0.0
VFB851 (VFB851Q) /CSM/VF/VFB8-C/VFB851Q.Seq.d/ 1080 0.0
SSM734 (SSM734Q) /CSM/SS/SSM7-B/SSM734Q.Seq.d/ 1080 0.0

own update 2009. 4. 4
Homology vs DNA

Score E
Sequences producing significant alignments: (bits) Value N

BI504877|BI504877.1 BB170011A20G10.5 Bee Brain Normalized/Subtracted Library, BB17 Apis mellifera cDNA clone BB170011A20G10 5', mRNA sequence. 82 2e-25 3
AX619982|AX619982.1 Sequence 2945 from Patent WO02094868. 50 3e-25 6
AX932030|AX932030.1 Sequence 13 from Patent WO03087352. 50 3e-25 6
AX932021|AX932021.1 Sequence 4 from Patent WO03087352. 50 3e-25 6
BD237140|BD237140.1 Staphylococcus aureus gene and polypeptide. 50 6e-25 6
AR282358|AR282358.1 Sequence 21 from patent US 6521441. 50 6e-25 6
AF065394|AF065394.1 Staphylococcus aureus enolase (eno) gene, complete cds. 50 6e-25 6
AR354089|AR354089.1 Sequence 207 from patent US 6593114. 50 7e-25 6
BD183626|BD183626.1 Material for diagnosing malaria and immune antigen for suppressing growth of plasmodium. 62 1e-24 5
BD183625|BD183625.1 Material for diagnosing malaria and immune antigen for suppressing growth of plasmodium. 62 1e-24 5
dna update 2004. 8. 1
Homology vs Protein

Score E
Sequences producing significant alignments: (bits) Value

(Q54RK5) RecName: Full=Enolase A; EC=4.2.1.11; AltName:... 300 1e-85
BC096516_1(BC096516|pid:none) Xenopus tropicalis hypothetical pr... 204 5e-57
BC045082_1(BC045082|pid:none) Xenopus laevis enolase 3, beta mus... 204 7e-57
EF137905_1(EF137905|pid:none) Helianthus annuus plastid enolase ... 206 9e-57
DQ497989_1(DQ497989|pid:none) Typhlonectes natans enolase B mRNA... 203 1e-56
AK290525_1(AK290525|pid:none) Homo sapiens cDNA FLJ77877 complet... 201 4e-56
(P09104) RecName: Full=Gamma-enolase; EC=4.2.1.11; AltN... 201 4e-56
CR859195_1(CR859195|pid:none) Pongo abelii mRNA; cDNA DKFZp459B1... 201 4e-56
BC017249_1(BC017249|pid:none) Homo sapiens enolase 3 (beta, musc... 201 7e-56
JC1039(JC1039)phosphopyruvate hydratase (EC 4.2.1.11) - rat 201 7e-56
protein update 2009. 4.24
PSORT

psg: 0.75 gvh: 0.51 alm: 0.43 top: 0.53 tms: 0.00 mit: 0.19 mip: 0.00
nuc: 0.00 erl: 0.00 erm: 0.00 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 1.00

48.0 %: cytoplasmic
24.0 %: nuclear
8.0 %: cytoskeletal
8.0 %: mitochondrial
4.0 %: Golgi
4.0 %: vacuolar
4.0 %: vesicles of secretory system

>> prediction for AFK532 is cyt

5' end seq. ID AFK532F
5' end seq.
>AFK532F.Seq
ACCCACTTATTACTTTATTTTTTTTTATCTCTATCTATATATATATCATTTTTTAAAATG
AGCGTCATCAAATCAATTAAAGCCAGAGAAATTTTAGATTCACGTGGTAACCCAACTGTT
GAAGTTGACCTTTACACCGAAAAAGATGGTGTTGTTTCATCATTCAGAGCTGCAGTTCCA
TCAGGTGCATCAACTGGTATTTATGAAGCTGTTGAATTAAGAGATGGTGATAAATCAAGA
TACTTAGGTAAAGGTGTACTCAAAGCAATCAAAAACATTCTCGAAGTCATTCAACCAGCC
GTCATTGGTAAATCAGTTTCCGATCAAGCTGCTATCGATAAATTAATGATCGATCTCGAT
GGTACCCCAAATAAAGGTAAATTAGGTGCCAACGCTATCCTTGCAGTCAGTTTAGCTGTT
TGCAGAGCTGGTGCTGCTGATAGAAATTTACCACTTTACAAATATATCTCAGAAATTGCA
GGTACTAAAATGAGATTACCAGTTCCAGCATTCAATGTTATCAATGGGTGGTTCACATGC
AGGTAATAAATTAGCTATGCAAGAATTTATGATTTTACC----------
Length of 5' end seq. 579
3' end seq. ID AFK532Z
3' end seq.
>AFK532Z.Seq
----------ANAATTCATTAAANAANATCCNATCNTTTCAATTGAANATCCNTTTGATC
AANATGATTGGGAATCATACCCTNAATTAACAGCNTCAGTTGANATTCNAANTGTTGGNG
ATGATTTACTTGNTACCNACCCANAAANAATTAANACTGGTATTGAAAANAAAGCATGTA
ATGCTNTTTTATTNAAAGTTAACCNAATTGGNTCAGTCNCTGAANCNATTNGNGCCGCTC
TTGACNCAAANAANGCNTCATGGGGNGTCANGGNTANCCNTCGNTCAGGTGAAACTGAAN
ANACCNTCNNTGCTGANTTAGNTGTTGGNTTAGGGACCGGNCNAATTAAAACTGGNGCNC
CNTGTAGATCAGAAANATT
Length of 3' end seq. 369
Connected seq. ID AFK532P
Connected seq.
>AFK532P.Seq
ACCCACTTATTACTTTATTTTTTTTTATCTCTATCTATATATATATCATTTTTTAAAATG
AGCGTCATCAAATCAATTAAAGCCAGAGAAATTTTAGATTCACGTGGTAACCCAACTGTT
GAAGTTGACCTTTACACCGAAAAAGATGGTGTTGTTTCATCATTCAGAGCTGCAGTTCCA
TCAGGTGCATCAACTGGTATTTATGAAGCTGTTGAATTAAGAGATGGTGATAAATCAAGA
TACTTAGGTAAAGGTGTACTCAAAGCAATCAAAAACATTCTCGAAGTCATTCAACCAGCC
GTCATTGGTAAATCAGTTTCCGATCAAGCTGCTATCGATAAATTAATGATCGATCTCGAT
GGTACCCCAAATAAAGGTAAATTAGGTGCCAACGCTATCCTTGCAGTCAGTTTAGCTGTT
TGCAGAGCTGGTGCTGCTGATAGAAATTTACCACTTTACAAATATATCTCAGAAATTGCA
GGTACTAAAATGAGATTACCAGTTCCAGCATTCAATGTTATCAATGGGTGGTTCACATGC
AGGTAATAAATTAGCTATGCAAGAATTTATGATTTTACC----------ANAATTCATTA
AANAANATCCNATCNTTTCAATTGAANATCCNTTTGATCAANATGATTGGGAATCATACC
CTNAATTAACAGCNTCAGTTGANATTCNAANTGTTGGNGATGATTTACTTGNTACCNACC
CANAAANAATTAANACTGGTATTGAAAANAAAGCATGTAATGCTNTTTTATTNAAAGTTA
ACCNAATTGGNTCAGTCNCTGAANCNATTNGNGCCGCTCTTGACNCAAANAANGCNTCAT
GGGGNGTCANGGNTANCCNTCGNTCAGGTGAAACTGAANANACCNTCNNTGCTGANTTAG
NTGTTGGNTTAGGGACCGGNCNAATTAAAACTGGNGCNCCNTGTAGATCAGAAANATT
Length of connected seq. 948
Full length Seq ID -
Full length Seq. -
Length of full length seq. -