>SLF167 (SLF167Q) /CSM/SL/SLF1-C/SLF167Q.Seq.d/
XXXXXXXXXXGGTAAAGCAAAAGTTGAAAGAGAAGGTAAAGATGTTACAATTGTTGGTTT
CTCTAGAATCGTTAGTAACTGTATGGAAGCTGCTGAAATACTTGCCAAAGAAGGTATCTC
TGCTGAAGTTATCAATTTACGTACCATTCGTCCAATTGATGCTGAAACCATTGTAAATTC
ACTCAAAAAAACAAATAAATTAGTTACCGTTGAAGAAGGTTGGGCACAATCTGGTATTGG
TGCTGAAATCTCTGCATTAATGATGGAACATGCTTTTGATTATTTAGATGCCCCAATTGA
AAGAATTTGTGGTGCTGATGTTCCAATGCCATATGCTTCAAACTTGGAAAATGCTGCTAT
GGTCCAAACTCAAAACATTGTCAATGCTGCTAAAAGAGTTACTCAAAGAAATAAATAAAT
TTAAAAAAAAAAAAGTCTTGAATTAATTTTTTCTCACGAAAAAAAAGAAATAATGATAAA
GAAAAAATAA

---KAKVEREGKDVTIVGFSRIVSNCMEAAEILAKEGISAEVINLRTIRPIDAETIVNSL
KKTNKLVTVEEGWAQSGIGAEISALMMEHAFDYLDAPIERICGADVPMPYASNLENAAMV
QTQNIVNAAKRVTQRNK*i*kkkslelifshekkeimikkk*

Frame A:
---vkqklkekvkmlqllvsleslvtvwkllkylpkkvsllklsiyvpfvqlmlkpl*ih
skkqin*lplkkvghnlvlvlkslh**wnmllii*mpqlkefvvlmfqchmlqtwkmllw
sklktlsmllkellkeinkfkkkkvln*ffltkkkk***rkn


Frame B:
---*sks*krr*rcyncwfl*nr**lygsc*ntcqrrylc*syqftyhssn*c*nhckft
qknk*isyr*rrlgtiwywc*nlcindgtcf*lfrcpn*knlwc*csnaicfklgkccyg
pnskhcqcc*ksyskk*inlkkkks*inffsrkkrnndkeki


Frame C:
---KAKVEREGKDVTIVGFSRIVSNCMEAAEILAKEGISAEVINLRTIRPIDAETIVNSL
KKTNKLVTVEEGWAQSGIGAEISALMMEHAFDYLDAPIERICGADVPMPYASNLENAAMV
QTQNIVNAAKRVTQRNK*i*kkkslelifshekkeimikkk*

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SLF167 (SLF167Q) /CSM/SL/SLF1-C/SLF167Q.Seq.d/                        791   0.0
SSH590 (SSH590Q) /CSM/SS/SSH5-D/SSH590Q.Seq.d/                        785   0.0
SSC259 (SSC259Q) /CSM/SS/SSC2-C/SSC259Q.Seq.d/                        783   0.0
SLF345 (SLF345Q) /CSM/SL/SLF3-B/SLF345Q.Seq.d/                        779   0.0
SLE252 (SLE252Q) /CSM/SL/SLE2-C/SLE252Q.Seq.d/                        775   0.0
FC-BQ09 (FC-BQ09Q) /CSM/FC/FC-BQ/FC-BQ09Q.Seq.d/                      773   0.0
FC-BN12 (FC-BN12Q) /CSM/FC/FC-BN/FC-BN12Q.Seq.d/                      722   0.0
FC-537 (FC-537Q) /CSM/CG/CG-FC/FC-537Q.Seq.d/                         722   0.0
VFO292 (VFO292Q) /CSM/VF/VFO2-D/VFO292Q.Seq.d/                        702   0.0
SLG367 (SLG367Q) /CSM/SL/SLG3-C/SLG367Q.Seq.d/                        660   0.0

                                                               Score     E
Sequences producing significant alignments:                    (bits)  Value  N

AC114263|AC114263.2 Dictyostelium discoideum chromosome 2 map 215673-367476 strain AX4, complete sequence.   345  0.0  7
AJ229812|AJ229812.1 Kluyveromyces lactis DNA fragment for sequence tagged site, clone.    40  3e-11  4
AU286740|AU286740.1 Zinnia elegans cDNA, clone:Z1344, primer:M13 reverse, sequence 1.    46  2e-09  3
AL403179|AL403179.1 T7 end of clone AT0AA007A08 of library AT0AA from strain CBS 4311 of Saccharomyces servazzii.    48  1e-07  2
BQ415380|BQ415380.1 GA__Ed0098D10r Gossypium arboreum 7-10 dpa fiber library Gossypium arboreum cDNA clone GA__Ed0098D10r, mRNA sequence.    46  2e-06  3
BQ415417|BQ415417.1 GA__Ed0098H03r Gossypium arboreum 7-10 dpa fiber library Gossypium arboreum cDNA clone GA__Ed0098H03r, mRNA sequence.    46  2e-06  3
AZ931126|AZ931126.1 474.dhz62d08.s1 Saccharomyces unisporus NRRL Y-1556 Saccharomyces unisporus genomic clone 474.dhz62d08.s1, DNA sequence.    46  5e-06  2
BQ969986|BQ969986.1 QHB3d04.yg.ab1 QH_ABCDI sunflower RHA801 Helianthus annuus cDNA clone QHB3d04, mRNA sequence.    44  6e-06  3
BQ917093|BQ917093.1 QHB20E05.yg.ab1 QH_ABCDI sunflower RHA801 Helianthus annuus cDNA clone QHB20E05, mRNA sequence.    44  7e-06  3
BQ969891|BQ969891.1 QHB39N10.yg.ab1 QH_ABCDI sunflower RHA801 Helianthus annuus cDNA clone QHB39N10, mRNA sequence.    44  8e-06  3

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

(Q86HX0) RecName: Full=Pyruvate dehydrogenase E1 component subun...   261   6e-69
EF144284_1(EF144284|pid:none) Populus trichocarpa clone PX0015_F...   177   1e-43
BT062874_1(BT062874|pid:none) Zea mays full-length cDNA clone ZM...   173   2e-42
AK104686_2(AK104686|pid:none) Oryza sativa Japonica Group cDNA c...   172   4e-42
AK104686_1(AK104686|pid:none) Oryza sativa Japonica Group cDNA c...   172   4e-42
CU459003_1537(CU459003|pid:none) Magnetospirillum gryphiswaldens...   171   6e-42
EU962529_1(EU962529|pid:none) Zea mays clone 243474 pyruvate deh...   170   1e-41
AF069910_1(AF069910|pid:none) Zea mays pyruvate dehydrogenase E1...   170   1e-41
AK061863_1(AK061863|pid:none) Oryza sativa Japonica Group cDNA c...   170   2e-41
CP000613_109(CP000613|pid:none) Rhodospirillum centenum SW, comp...   168   5e-41

 psg: 0.78  gvh: 0.50  alm: 0.44  top: 0.53  tms: 0.00  mit: 0.25  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 40.0 %: nuclear
	 36.0 %: cytoplasmic
	 12.0 %: mitochondrial
	  4.0 %: cytoskeletal
	  4.0 %: vesicles of secretory system
	  4.0 %: endoplasmic reticulum

>> prediction for SLF167 is nuc

>SLF167Z.Seq
----------GGTAAAGCAAAAGTTGAAAGAGAAGGTAAAGATGTTACAATTGTTGGTTT
CTCTAGAATCGTTAGTAACTGTATGGAAGCTGCTGAAATACTTGCCAAAGAAGGTATCTC
TGCTGAAGTTATCAATTTACGTACCATTCGTCCAATTGATGCTGAAACCATTGTAAATTC
ACTCAAAAAAACAAATAAATTAGTTACCGTTGAAGAAGGTTGGGCACAATCTGGTATTGG
TGCTGAAATCTCTGCATTAATGATGGAACATGCTTTTGATTATTTAGATGCCCCAATTGA
AAGAATTTGTGGTGCTGATGTTCCAATGCCATATGCTTCAAACTTGGAAAATGCTGCTAT
GGTCCAAACTCAAAACATTGTCAATGCTGCTAAAAGAGTTACTCAAAGAAATAAATAAAT
TTAAAAAAAAAAAAGTCTTGAATTAATTTTTTCTCACGAAAAAAAAGAAATAATGATAAA
GAAAAAATAA