>SLE775 (SLE775Q) /CSM/SL/SLE7-D/SLE775Q.Seq.d/
CCCACGCGTCCGGAAATGGTAACATTTAACCTTAAAAATGTAACCGAACGAACACTATGA
TCCTTCTAATNCTATCTGAAGACGATTTCAATGGAGGAGCTTTAGAGTTAGAAGAACAGT
CAAAAGTTAATTTTTCATCTCCAGATTTTATGTTTCAATTTTTATTAATGGAAACACTTT
TAATTAAAGAAGTTAAAAGGATAGAAGAAAGTAACTATTGTAGTTTAGAAAGAGGCGAAG
GACCATATGTAAAAATCAATTGGACCCCAAATTTTGAGGATTTCATTTCAAACTCATTAA
AAATAACTGAATATGAAATTAGTGAAAATTTTCATTTTAGAGATAATTTATTTACTAAAA
ACTACTCACAAATGAAAAGAGATAAAGCTAAAAAAAGTTTAGAATCACTTAATTTACTTA
AACACAAAGCTCGTAAAATGATAAGTGAGTTTCAAACATTAAAAGAXXXXXXXXXX

hasgngni*p*KCNRTNTMILLXLSEDDFNGGALELEEQSKVNFSSPDFMFQFLLMETLL
IKEVKRIEESNYCSLERGEGPYVKINWTPNFEDFISNSLKITEYEISENFHFRDNLFTKN
YSQMKRDKAKKSLESLNLLKHKARKMISEFQTLK---

Frame A:
ptrpemvtfnlknvtertl*sf*xylktismeel*s*knsqklifhlqilcfnfy*wkhf
*lkklkg*kkvtivv*keakdhm*ksigpqilrisfqth*k*lnmklvkifileiiyllk
tthk*keiklkkv*nhliylntklvk**vsfkh*k---


Frame B:
prvrkw*hltlkm*pnehydpsnxi*rrfqwrsfrvrrtvks*ffisrfyvsifingntf
n*rs*kdrrk*ll*frkrrrticknqldpkf*gfhfkliknn*i*n**kfsf*r*fiy*k
lltnekr*s*kkfrit*ft*tqss*ndk*vsnik---


Frame C:
hasgngni*p*KCNRTNTMILLXLSEDDFNGGALELEEQSKVNFSSPDFMFQFLLMETLL
IKEVKRIEESNYCSLERGEGPYVKINWTPNFEDFISNSLKITEYEISENFHFRDNLFTKN
YSQMKRDKAKKSLESLNLLKHKARKMISEFQTLK---

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SLE775 (SLE775Q) /CSM/SL/SLE7-D/SLE775Q.Seq.d/                        876   0.0
VFG847 (VFG847Q) /CSM/VF/VFG8-B/VFG847Q.Seq.d/                        761   0.0
SHJ744 (SHJ744Q) /CSM/SH/SHJ7-B/SHJ744Q.Seq.d/                        761   0.0
SHH716 (SHH716Q) /CSM/SH/SHH7-A/SHH716Q.Seq.d/                        761   0.0
SFF610 (SFF610Q) /CSM/SF/SFF6-A/SFF610Q.Seq.d/                        761   0.0
CHB687 (CHB687Q) /CSM/CH/CHB6-D/CHB687Q.Seq.d/                        761   0.0
CHB220 (CHB220Q) /CSM/CH/CHB2-A/CHB220Q.Seq.d/                        761   0.0
AFN753 (AFN753Q) /CSM/AF/AFN7-C/AFN753Q.Seq.d/                        761   0.0
AFN427 (AFN427Q) /CSM/AF/AFN4-B/AFN427Q.Seq.d/                        761   0.0
AFI858 (AFI858Q) /CSM/AF/AFI8-C/AFI858Q.Seq.d/                        761   0.0

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

AE017338|AE017338.1 Mycoplasma mobile 163K section 2 of 3 of the complete genome.    32   4e-05  14
CR339042|CR339042.3 Zebrafish DNA sequence *** SEQUENCING IN PROGRESS *** from clone CH211-268L18.    32   0.001  9
AP004170|AP004170.1 Mycoplasma penetrans genomic DNA, complete sequence, section 1/5.    40   0.002  11
BX004803|BX004803.11 Zebrafish DNA sequence from clone CH211-119C20 in linkage group 12.    36   0.026  4
AC143341|AC143341.8 Medicago truncatula clone mth2-7a11, complete sequence.    34   0.044  5
AC027759|AC027759.2 Homo sapiens clone RP11-605B12, WORKING DRAFT SEQUENCE, 23 unordered pieces.    40   0.050  7
AX346351|AX346351.1 Sequence 1422 from Patent WO0200928.           32   0.075  4
AX339163|AX339163.1 Sequence 30 from Patent WO0176451.             32   0.075  4
AC147009|AC147009.4 Medicago truncatula clone mth2-139j3, complete sequence.    32   0.083  8
AR300198|AR300198.1 Sequence 1 from patent US 6537773.             42   0.088  11

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BX293980_380(BX293980|pid:none) Mycoplasma mycoides subsp. mycoi...    35   0.85
AB010695_3(AB010695|pid:none) Arabidopsis thaliana genomic DNA, ...    35   1.1
(Q2KIU7) RecName: Full=UPF0685 protein C6orf206 homolog;  &BC112...    33   2.5
CP001161_107(CP001161|pid:none) Buchnera aphidicola str. 5A (Acy...    33   4.2
CP000153_814(CP000153|pid:none) Sulfurimonas denitrificans DSM 1...    33   4.2
(P57221) RecName: Full=Tyrosyl-tRNA synthetase;          EC=6.1....    33   4.2
CP001184_449(CP001184|pid:none) Ureaplasma urealyticum serovar 1...    33   4.2
AE008384_1961(AE008384|pid:none) Methanosarcina mazei strain Goe...    33   4.2
CP000263_110(CP000263|pid:none) Buchnera aphidicola str. Cc (Cin...    32   5.5
CP001080_639(CP001080|pid:none) Sulfurihydrogenibium sp. YO3AOP1...    32   5.5

 psg: 0.93  gvh: 0.39  alm: 0.44  top: -0.07  tms: 0.00  mit: 0.25  mip: 0.02
 nuc: 0.06  erl: 0.00  erm: 0.20  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 32.0 %: nuclear
	 24.0 %: cytoplasmic
	 20.0 %: extracellular, including cell wall
	  8.0 %: vacuolar
	  8.0 %: endoplasmic reticulum
	  4.0 %: mitochondrial
	  4.0 %: vesicles of secretory system

>> prediction for SLE775 is nuc

>SLE775F.Seq
CCCACGCGTCCGGAAATGGTAACATTTAACCTTAAAAATGTAACCGAACGAACACTATGA
TCCTTCTAATNCTATCTGAAGACGATTTCAATGGAGGAGCTTTAGAGTTAGAAGAACAGT
CAAAAGTTAATTTTTCATCTCCAGATTTTATGTTTCAATTTTTATTAATGGAAACACTTT
TAATTAAAGAAGTTAAAAGGATAGAAGAAAGTAACTATTGTAGTTTAGAAAGAGGCGAAG
GACCATATGTAAAAATCAATTGGACCCCAAATTTTGAGGATTTCATTTCAAACTCATTAA
AAATAACTGAATATGAAATTAGTGAAAATTTTCATTTTAGAGATAATTTATTTACTAAAA
ACTACTCACAAATGAAAAGAGATAAAGCTAAAAAAAGTTTAGAATCACTTAATTTACTTA
AACACAAAGCTCGTAAAATGATAAGTGAGTTTCAAACATTAAAAGA----------