SLE774
Library SL
(Link to library)
Clone ID SLE774
Atlas ID -
NBRP ID -
dictyBase ID -
Link to Contig Contig-U15434-1
Original site URL
Representative seq. ID SLE774Z
(Link to Original site)
Representative DNA sequence
>SLE774 (SLE774Q) /CSM/SL/SLE7-D/SLE774Q.Seq.d/
XXXXXXXXXXACCATGGAAACCGCCGCTCCATTATCAAACATTTTCGTCACCACCACCGG
TTGTCGTGATATCGTCAGAGGTGAACACTTTGCCGTCATGAAAGAAGATGCCATCGTTTG
TAACATTGGTCACTTTGATTGTGAAATCGATGTCGCTTGGTTAAACGCCAACGCCAAAAA
AGATACCGTCAAACCACAAGTTGACCGTTACACCCTTGCCAACGGTGTCCACATCATCCT
CTTAGCTGAAGGTCGTCTCGTCAATTTAGGTTGTGGTACTGGTCATCCATCTTTTGTTAT
GTCAAACTCTTTCTGTAACCAAACTTTAGCTCAAATCGCCCTCTGGACTAAAACTGAAGA
ATACCCATTAGGTGTCCACTTCTTACCAAAGATTTTAGATGAAGAAGTTGCTCGTTTACA
TTTAGATCAATTAGGTGCTAAATTAACTACCCTCACTGAAAAACAATCCGAATATTTATC
AGTTCCAGTCGCTGGTCCATACAAAGTTGATCACTACAGATATTAAAATCTTTTGTTTAA
TAAATATATAAAACTTTTTTAACAAAAAAAAAAAAA
sequence update 1998. 6. 1
Translated Amino Acid sequence
---METAAPLSNIFVTTTGCRDIVRGEHFAVMKEDAIVCNIGHFDCEIDVAWLNANAKKD
TVKPQVDRYTLANGVHIILLAEGRLVNLGCGTGHPSFVMSNSFCNQTLAQIALWTKTEEY
PLGVHFLPKILDEEVARLHLDQLGAKLTTLTEKQSEYLSVPVAGPYKVDHYRY*nllfnk
yiklf*qkkk


Translated Amino Acid sequence (All Frames)
Frame A:
---pwkpplhyqtfsspppvvvissevntlps*kkmpsfvtlvtlivksmslg*tptpkk
ipsnhkltvtplptvstsss*lkvvssi*vvvlvihlllcqtlsvtkl*lkspsglklkn
th*vstsyqrf*mkkllvyi*in*vln*lpslknnpniyqfqslvhtklittdikifcli
ni*nffnkkkk


Frame B:
---hgnrrsiikhfrhhhrls*yrqr*tlcrherrchrl*hwsl*l*nrcrlvkrqrqkr
yrqtts*plhpcqrcphhpls*rssrqfrlwywssifcyvklfl*pnfssnrpld*n*ri
pircplltkdfr*rscsftfrsirc*inyph*ktirifisssrwsiqs*slqilksfv**
iyktfltkkkk


Frame C:
---METAAPLSNIFVTTTGCRDIVRGEHFAVMKEDAIVCNIGHFDCEIDVAWLNANAKKD
TVKPQVDRYTLANGVHIILLAEGRLVNLGCGTGHPSFVMSNSFCNQTLAQIALWTKTEEY
PLGVHFLPKILDEEVARLHLDQLGAKLTTLTEKQSEYLSVPVAGPYKVDHYRY*nllfnk
yiklf*qkkk


Homology vs CSM-cDNA

Score E
Sequences producing significant alignments: (bits) Value

VSE832 (VSE832Q) /CSM/VS/VSE8-B/VSE832Q.Seq.d/ 1096 0.0
SLI320 (SLI320Q) /CSM/SL/SLI3-A/SLI320Q.Seq.d/ 1096 0.0
SLH831 (SLH831Q) /CSM/SL/SLH8-B/SLH831Q.Seq.d/ 1096 0.0
SLH617 (SLH617Q) /CSM/SL/SLH6-A/SLH617Q.Seq.d/ 1096 0.0
SLH447 (SLH447Q) /CSM/SL/SLH4-B/SLH447Q.Seq.d/ 1096 0.0
SLG713 (SLG713Q) /CSM/SL/SLG7-A/SLG713Q.Seq.d/ 1096 0.0
SLG240 (SLG240Q) /CSM/SL/SLG2-B/SLG240Q.Seq.d/ 1096 0.0
SLG194 (SLG194Q) /CSM/SL/SLG1-D/SLG194Q.Seq.d/ 1096 0.0
SLF201 (SLF201Q) /CSM/SL/SLF2-A/SLF201Q.Seq.d/ 1096 0.0
SLE894 (SLE894Q) /CSM/SL/SLE8-D/SLE894Q.Seq.d/ 1096 0.0

own update 2000. 9. 1
Homology vs DNA

Score E
Sequences producing significant alignments: (bits) Value N

M19937|M19937.1 Slime mold (D.discoideum) S-adenosyl-L-homocysteine hydrolase mRNA, complete cds. 1053 0.0 1
X12523|X12523.1 D. discoideum mRNA fragment for S-adenosyl-L-homocysteine hydrolase (EC 3.3.1.1). 513 0.0 4
AL427749|AL427749.1 clone BA0AB021D03 of library BA0AB from strain CLIB 210 of Kluyveromyces lactis. 84 2e-23 3
AL924250|AL924250.1 Danio rerio EST sequence, clone 137-B10-2. 48 9e-15 3
AL395533|AL395533.1 T7 end of clone AR0AA024E04 of library AR0AA from strain CBS 732 of Zygosaccharomyces rouxii. 44 1e-13 4
AL399016|AL399016.1 T7 end of clone AS0AA012E07 of library AS0AA from strain CLIB 533 of Saccharomyces bayanus. 56 6e-12 3
CF453315|CF453315.1 ft536_2_K11 Fusarium verticillioides fcc1 mutant subtraction library Gibberella moniliformis cDNA, mRNA sequence. 52 7e-11 3
AB004537|AB004537.1 Schizosaccharomyces pombe 37 kb genomic DNA, clone c213. 60 4e-10 2
AL022072|AL022072.1 S.pombe chromosome II cosmid c8D2. 60 5e-10 2
BI189494|BI189494.1 f1e05fs.r1 Fusarium sporotrichioides Tri 10 overexpressed cDNA library Fusarium sporotrichioides cDNA clone f1e05fs 5', mRNA sequence. 42 1e-09 3
dna update 2004. 6. 1
Homology vs Protein

Score E
Sequences producing significant alignments: (bits) Value

A27655(A27655;S06394) adenosylhomocysteinase (EC 3.3.1.1) - slim... 351 9e-96
X12523_1(X12523|pid:none) D. discoideum mRNA fragment for S-aden... 313 1e-86
(P27604) RecName: Full=Adenosylhomocysteinase; Short=Ad... 265 5e-70
(O13639) RecName: Full=Adenosylhomocysteinase; Short=Ad... 264 1e-69
AY278950_1(AY278950|pid:none) Branchiostoma belcheri tsingtaunes... 259 3e-68
DQ167408_1(DQ167408|pid:none) Volvariella volvacea S-adenosyl-L-... 259 5e-68
DQ676850_1(DQ676850|pid:none) Pimephales promelas S-adenosylhomo... 253 3e-66
BC135905_1(BC135905|pid:none) Xenopus tropicalis S-adenosylhomoc... 251 7e-66
(Q27580) RecName: Full=Adenosylhomocysteinase; Short=Ad... 251 1e-65
DQ440384_1(DQ440384|pid:none) Aedes aegypti clone AET-5159 S-ade... 251 1e-65
protein update 2009. 6. 3
PSORT

psg: 0.75 gvh: 0.45 alm: 0.41 top: 0.53 tms: 0.00 mit: 0.26 mip: 0.00
nuc: 0.00 erl: 0.00 erm: 0.00 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.12 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 1.00

40.0 %: cytoplasmic
40.0 %: nuclear
8.0 %: cytoskeletal
8.0 %: mitochondrial
4.0 %: endoplasmic reticulum

>> prediction for SLE774 is cyt

5' end seq. ID -
5' end seq. -
Length of 5' end seq. -
3' end seq. ID SLE774Z
3' end seq.
>SLE774Z.Seq
----------ACCATGGAAACCGCCGCTCCATTATCAAACATTTTCGTCACCACCACCGG
TTGTCGTGATATCGTCAGAGGTGAACACTTTGCCGTCATGAAAGAAGATGCCATCGTTTG
TAACATTGGTCACTTTGATTGTGAAATCGATGTCGCTTGGTTAAACGCCAACGCCAAAAA
AGATACCGTCAAACCACAAGTTGACCGTTACACCCTTGCCAACGGTGTCCACATCATCCT
CTTAGCTGAAGGTCGTCTCGTCAATTTAGGTTGTGGTACTGGTCATCCATCTTTTGTTAT
GTCAAACTCTTTCTGTAACCAAACTTTAGCTCAAATCGCCCTCTGGACTAAAACTGAAGA
ATACCCATTAGGTGTCCACTTCTTACCAAAGATTTTAGATGAAGAAGTTGCTCGTTTACA
TTTAGATCAATTAGGTGCTAAATTAACTACCCTCACTGAAAAACAATCCGAATATTTATC
AGTTCCAGTCGCTGGTCCATACAAAGTTGATCACTACAGATATTAAAATCTTTTGTTTAA
TAAATATATAAAACTTTTTTAACAAAAAAAAAAAAA
Length of 3' end seq. 566
Connected seq. ID -
Connected seq. -
Length of connected seq. -
Full length Seq ID -
Full length Seq. -
Length of full length seq. -