>SLE714 (SLE714Q) /CSM/SL/SLE7-A/SLE714Q.Seq.d/
XXXXXXXXXXACAATTGGTTTTGTAACTACCACTGGTGTAACAGCTTCAACGATTGGCAT
TGTTACTACAACTGGTTTCATAACTTCAACAACTTCAACAACTGGTTTATTAACCACTGC
TTCAACAACCTCAACAACTGGTATATTAACCACTGCTTCATCAACTTCAACAACGGGAAT
ACCAACAATTTCAACATCAATTTCGACATCAGGAGCAACAGGAACAACAACAACCCCAAC
AACAGGTTCCACTGGAACAATACCACCTATTGACCTTGCAAAATGTAGTCATGATTCTTG
CCCACCTCATTATTACTGTTATCAATTAACAAATTCATACACTTGTATATCAAAAGAATT
TTATAATAATTGTGAACCTGAAAGATTAATATTATTTTATTAATAATTAAAAACAAAAAT
AAATAAAAAACCAAATTTTAAAACTTTATTCTTTTAACAATACTATAAAAAATTATTAA

---IGFVTTTGVTASTIGIVTTTGFITSTTSTTGLLTTASTTSTTGILTTASSTSTTGIP
TISTSISTSGATGTTTTPTTGSTGTIPPIDLAKCSHDSCPPHYYCYQLTNSYTCISKEFY
NNCEPERLILFY**lktkinkkpnfktlff*qyykkll

Frame A:
---qlvl*lplv*qlqrlalllqlvs*lqqlqqlvy*pllqqpqqlvy*pllhqlqqrey
qqfqhqfrhqeqqeqqqpqqqvpleqyhlltlqnvvmilahliitvin*qihtlvyqknf
iiivnlkd*yyfinn*kqk*iknqilklysfnntikny*


Frame B:
---nwfcnyhwcnsfndwhcyynwfhnfnnfnnwfinhcfnnlnnwyinhcfinfnngnt
nnfninfdirsnrnnnnpnnrfhwnntty*pckm*s*flptsllllsinkfihlyikril
**l*t*kiniilliiknknk*ktkf*nfilltil*kii


Frame C:
---IGFVTTTGVTASTIGIVTTTGFITSTTSTTGLLTTASTTSTTGILTTASSTSTTGIP
TISTSISTSGATGTTTTPTTGSTGTIPPIDLAKCSHDSCPPHYYCYQLTNSYTCISKEFY
NNCEPERLILFY**lktkinkkpnfktlff*qyykkll

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SLE714 (SLE714Q) /CSM/SL/SLE7-A/SLE714Q.Seq.d/                        741   0.0
SLB129 (SLB129Q) /CSM/SL/SLB1-B/SLB129Q.Seq.d/                        741   0.0
SFJ534 (SFJ534Q) /CSM/SF/SFJ5-B/SFJ534Q.Seq.d/                        741   0.0
SFG229 (SFG229Q) /CSM/SF/SFG2-B/SFG229Q.Seq.d/                        741   0.0
SFE249 (SFE249Q) /CSM/SF/SFE2-C/SFE249Q.Seq.d/                        741   0.0
SFE196 (SFE196Q) /CSM/SF/SFE1-D/SFE196Q.Seq.d/                        741   0.0
CFE544 (CFE544Q) /CSM/CF/CFE5-B/CFE544Q.Seq.d/                        741   0.0
AFI301 (AFI301Q) /CSM/AF/AFI3-A/AFI301Q.Seq.d/                        741   0.0
SFK654 (SFK654Q) /CSM/SF/SFK6-C/SFK654Q.Seq.d/                        733   0.0
AFD319 (AFD319Q) /CSM/AF/AFD3-A/AFD319Q.Seq.d/                        733   0.0

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

BM278527|BM278527.1 As_tgz_62F06_SKPL Ascaris suum adult male testis germinal zone fromAlan Scott Ascaris suum cDNA clone As_tgz_62F06 5', mRNA sequence.    32   0.003  3
BM278533|BM278533.1 As_tgz_63A07_SKPL Ascaris suum adult male testis germinal zone from Alan Scott Ascaris suum cDNA clone As_tgz_63A07 5', mRNA sequence.    32   0.003  3
Y13097|Y13097.1 Dictyostelium discoideum dstA mRNA for STATa protein, first finger  stage.    42   0.003  2
BM278817|BM278817.1 As_tgz_67H02_SKPL Ascaris suum adult male testis germinal zone from Alan Scott Ascaris suum cDNA clone As_tgz_67H02 5', mRNA sequence.    32   0.004  3
BM278613|BM278613.1 As_tgz_65A09_SKPL Ascaris suum adult male testis germinal zone from Alan Scott Ascaris suum cDNA clone As_tgz_65A09 5', mRNA sequence.    32   0.004  3
CB014973|CB014973.1 As_tgz_87H09_SKPL Ascaris suum adult male testis germinal zone from Alan Scott Ascaris suum cDNA clone As_tgz_87H09 5', mRNA sequence.    32   0.004  3
BM278526|BM278526.1 As_tgz_62F05_SKPL Ascaris suum adult male testis germinal zone from Alan Scott Ascaris suum cDNA clone As_tgz_62F05 5', mRNA sequence.    32   0.004  3
CB013842|CB013842.1 As_tgz_70G12_SKPL Ascaris suum adult male testis germinal zone from Alan Scott Ascaris suum cDNA clone As_tgz_70G12 5', mRNA sequence.    32   0.004  3
AC116919|AC116919.2 Dictyostelium discoideum chromosome 2 map complement(6245035-6206343) strain AX4, complete sequence.    36   0.004  5
BI594773|BI594773.1 As_tgz_43G10_SKPL Ascaris suum adult male testis germinal zone from Alan Scott Ascaris suum cDNA clone As_tgz_43G10 5', mRNA sequence.    34   0.005  3

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

FJ580047_1(FJ580047|pid:none) Apis mellifera neurexin I isoform ...    34   1.9
FJ580046_1(FJ580046|pid:none) Apis mellifera neurexin I isoform ...    34   1.9
AK084876_1(AK084876|pid:none) Mus musculus 13 days embryo lung c...    33   2.4
AK041633_1(AK041633|pid:none) Mus musculus 3 days neonate thymus...    33   2.4
(P10493) RecName: Full=Nidogen-1;          Short=NID-1; AltName:...    33   2.4
X14480_1(X14480|pid:none) Mouse mRNA for nidogen.                      33   2.4
M33753_1(M33753|pid:none) D.melanogaster crumbs protein mRNA, co...    32   7.1
(P10040) RecName: Full=Protein crumbs; AltName: Full=95F; Flags:...    32   7.1
AE014134_1265(AE014134|pid:none) Drosophila melanogaster chromos...    32   9.3
AF239608_1(AF239608|pid:none) Drosophila melanogaster SP1070 mRN...    32   9.3

 psg: 0.75  gvh: 0.57  alm: 0.37  top: 0.53  tms: 0.00  mit: 0.63  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 84.0 %: mitochondrial
	 12.0 %: nuclear
	  4.0 %: cytoplasmic

>> prediction for SLE714 is mit

>SLE714Z.Seq
----------ACAATTGGTTTTGTAACTACCACTGGTGTAACAGCTTCAACGATTGGCAT
TGTTACTACAACTGGTTTCATAACTTCAACAACTTCAACAACTGGTTTATTAACCACTGC
TTCAACAACCTCAACAACTGGTATATTAACCACTGCTTCATCAACTTCAACAACGGGAAT
ACCAACAATTTCAACATCAATTTCGACATCAGGAGCAACAGGAACAACAACAACCCCAAC
AACAGGTTCCACTGGAACAATACCACCTATTGACCTTGCAAAATGTAGTCATGATTCTTG
CCCACCTCATTATTACTGTTATCAATTAACAAATTCATACACTTGTATATCAAAAGAATT
TTATAATAATTGTGAACCTGAAAGATTAATATTATTTTATTAATAATTAAAAACAAAAAT
AAATAAAAAACCAAATTTTAAAACTTTATTCTTTTAACAATACTATAAAAAATTATTAA