>SLE663 (SLE663Q) /CSM/SL/SLE6-C/SLE663Q.Seq.d/
XXXXXXXXXXCCATTACGTATTCCATTACAGATGTCTACAAGATCGGTGGTATCGGTACT
GTTCCAGTAGGTCGTGTCGAAACTGGTATCATTAAACCAGGTATGGTCGTCACCTTTGCC
CCAGCTGGTCTCTCAACTGAAGTCAAATCAGTCGAAATGCATCACGAACAACTCCCAGAA
GCCCGTCCAGGTGACAATGTAGGTTTCAACGTTAAAAACGTTTCAGTCAAAGAAATTAAA
AGAGGTATGGTCGCTGGTGACTCCAAAAACGATCCACCACAAGAAACTGAAAAATTCGTT
GCTCAAGTTATCGTCCTCAACCATCCAGGTCAAATCCATGCTGGTTACTCACCAGTCTTA
GATTGTCACACTGCTCACATTGCCTGTAAATTCACTGAAATCGTCGATAAAGTTGATCGT
CGTACTGGTGCCGTCGTTGCCAAAGAAGGTACTGCCGCCGTCGTCTTAAAGAATGGTGAT
GCCGCTATGGTCGAATTAACCCCATCTCGTCCAATGTGTGTTGAATCCTTCACTGAATAC
CCACCATTAGGTCGTTTCGCCGTCAGAGATATGAGACAAACCGTCGCCGTCGGTGTCATC
AAATCAACCGTCAAGAAAGCCCCAGGTAAAGCCGGTGATAAGAAAGGTGCTGCTGCCNAT
TCAAAAAAGAAATAAATAAATAATATTTCTTAATAAATAGCATTTTATAATAATTTTAAA
AA

---ITYSITDVYKIGGIGTVPVGRVETGIIKPGMVVTFAPAGLSTEVKSVEMHHEQLPEA
RPGDNVGFNVKNVSVKEIKRGMVAGDSKNDPPQETEKFVAQVIVLNHPGQIHAGYSPVLD
CHTAHIACKFTEIVDKVDRRTGAVVAKEGTAAVVLKNGDAAMVELTPSRPMCVESFTEYP
PLGRFAVRDMRQTVAVGVIKSTVKKAPGKAGDKKGAAAXSKKK*innis**iafynnfk

Frame A:
---hyvfhyrclqdrwyrycssrscrnwyh*trygrhlcpswsln*sqisrnasrttprs
psr*qcrfqr*krfsqrn*krygrw*lqkrsttrn*kircssyrpqpsrsnpcwlltslr
lshcshcl*ih*nrr*s*ssywcrrcqrrycrrrlkew*crygrinpissnvc*ilh*ip
tirsfrrqryetnrrrrchqinrqespr*sr**ercccxfkkeink*yflinsil**f*k


Frame B:
---ITYSITDVYKIGGIGTVPVGRVETGIIKPGMVVTFAPAGLSTEVKSVEMHHEQLPEA
RPGDNVGFNVKNVSVKEIKRGMVAGDSKNDPPQETEKFVAQVIVLNHPGQIHAGYSPVLD
CHTAHIACKFTEIVDKVDRRTGAVVAKEGTAAVVLKNGDAAMVELTPSRPMCVESFTEYP
PLGRFAVRDMRQTVAVGVIKSTVKKAPGKAGDKKGAAAXSKKK*innis**iafynnfk


Frame C:
---lriplqmstrsvvsvlfq*vvsklvslnqvwssplpqlvsqlksnqskcitnnsqkp
vqvtm*vstlktfqskklkevwslvtpktihhkklknsllklssstiqvksmlvthqs*i
vtlltlpvnslkssiklivvlvpslpkkvlppss*rmvmplwsn*phlvqcvlnpslnth
h*vvspsei*dkpspsvssnqpsrkpqvkpvirkvllpiqkrnk*iiflnk*hfiiilk

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SLE663 (SLE663Q) /CSM/SL/SLE6-C/SLE663Q.Seq.d/                       1306   0.0
VSD740 (VSD740Q) /CSM/VS/VSD7-B/VSD740Q.Seq.d/                       1277   0.0
VSD380 (VSD380Q) /CSM/VS/VSD3-D/VSD380Q.Seq.d/                       1277   0.0
VFN666 (VFN666Q) /CSM/VF/VFN6-C/VFN666Q.Seq.d/                       1277   0.0
VFN474 (VFN474Q) /CSM/VF/VFN4-D/VFN474Q.Seq.d/                       1277   0.0
VFN376 (VFN376Q) /CSM/VF/VFN3-D/VFN376Q.Seq.d/                       1277   0.0
VFN329 (VFN329Q) /CSM/VF/VFN3-B/VFN329Q.Seq.d/                       1277   0.0
VFN318 (VFN318Q) /CSM/VF/VFN3-A/VFN318Q.Seq.d/                       1277   0.0
VFN184 (VFN184Q) /CSM/VF/VFN1-D/VFN184Q.Seq.d/                       1277   0.0
VFN174 (VFN174Q) /CSM/VF/VFN1-D/VFN174Q.Seq.d/                       1277   0.0

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

(AU034902) Dictyostelium discoideum slug cDNA, clone SLE663.     1287   0.0    1
(X55973) D. discoideum EF1-I gene for elongation factor 1 al...  1245   0.0    2
(AU284628) Dictyostelium discoideum gamete cDNA clone:FC-BF1...  1245   0.0    2
(AU284342) Dictyostelium discoideum gamete cDNA clone:FC-AN0...  1245   0.0    1
(AU264497) Dictyostelium discoideum vegetative cDNA clone:VS...  1245   0.0    2
(AU263935) Dictyostelium discoideum vegetative cDNA clone:VS...  1245   0.0    2
(AU263821) Dictyostelium discoideum vegetative cDNA clone:VS...  1245   0.0    1
(AU052275) Dictyostelium discoideum slug cDNA, clone SLA488.     1245   0.0    2
(AU052219) Dictyostelium discoideum slug cDNA, clone SLA265.     1245   0.0    2
(AU039993) Dictyostelium discoideum slug cDNA, clone SLH395.     1245   0.0    2

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X55973_1(X55973|pid:none) D. discoideum EF1-I gene for elongatio...   390   e-107
X55972_1(X55972|pid:none) D. discoideum EF1-II gene for elongati...   390   e-107
(P18624) RecName: Full=Elongation factor 1-alpha;          Short...   390   e-107
AY542532_1(AY542532|pid:none) Cladonema radiatum translation elo...   312   7e-84
(P41745) RecName: Full=Elongation factor 1-alpha;          Short...   310   2e-83
AY643816_1(AY643816|pid:none) Lycogala epidendrum elongation fac...   309   6e-83
Y09023_1(Y09023|pid:none) G.cydonium mRNA for elongation factor ...   308   8e-83
FN392319_1522(FN392319|pid:none) Pichia pastoris GS115 chromosom...   308   1e-82
AJ581004_1(AJ581004|pid:none) Axinella verrucosa mRNA for elonga...   308   1e-82
(Q00251) RecName: Full=Elongation factor 1-alpha;          Short...   308   1e-82

 psg: 0.89  gvh: 0.50  alm: 0.42  top: 0.60  tms: 0.00  mit: 0.21  mip: 0.05
 nuc: 0.00  erl: 0.00  erm: 0.40  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 44.0 %: cytoplasmic
	 24.0 %: nuclear
	 16.0 %: mitochondrial
	  8.0 %: vacuolar
	  4.0 %: peroxisomal
	  4.0 %: endoplasmic reticulum

>> prediction for SLE663 is cyt

>SLE663Z.Seq
----------CCATTACGTATTCCATTACAGATGTCTACAAGATCGGTGGTATCGGTACT
GTTCCAGTAGGTCGTGTCGAAACTGGTATCATTAAACCAGGTATGGTCGTCACCTTTGCC
CCAGCTGGTCTCTCAACTGAAGTCAAATCAGTCGAAATGCATCACGAACAACTCCCAGAA
GCCCGTCCAGGTGACAATGTAGGTTTCAACGTTAAAAACGTTTCAGTCAAAGAAATTAAA
AGAGGTATGGTCGCTGGTGACTCCAAAAACGATCCACCACAAGAAACTGAAAAATTCGTT
GCTCAAGTTATCGTCCTCAACCATCCAGGTCAAATCCATGCTGGTTACTCACCAGTCTTA
GATTGTCACACTGCTCACATTGCCTGTAAATTCACTGAAATCGTCGATAAAGTTGATCGT
CGTACTGGTGCCGTCGTTGCCAAAGAAGGTACTGCCGCCGTCGTCTTAAAGAATGGTGAT
GCCGCTATGGTCGAATTAACCCCATCTCGTCCAATGTGTGTTGAATCCTTCACTGAATAC
CCACCATTAGGTCGTTTCGCCGTCAGAGATATGAGACAAACCGTCGCCGTCGGTGTCATC
AAATCAACCGTCAAGAAAGCCCCAGGTAAAGCCGGTGATAAGAAAGGTGCTGCTGCCNAT
TCAAAAAAGAAATAAATAAATAATATTTCTTAATAAATAGCATTTTATAATAATTTTAAA
AA