>SLE618 (SLE618Q) /CSM/SL/SLE6-A/SLE618Q.Seq.d/
ACCGAAACCAGTATTAATACCATACACGGTTTATTCTCTGATGTTATCATCCCACCTGAT
CAAATTAACTTGTAACATTTTAACTTGATCAGGTGGGATGATAACATCAGAGAATAAACC
GAAACCAGTATTAATGTTACAAGTTAATTTAATTAGATCACATTCATCAGGTGTTGGTAC
ACCATTAACACCAGAAAGAACTAGAATGTTATTAGCATTAAGAATTAATGTATTAACAAA
AGGATACAGTGGTATTACATTAGAGACAGTAAAGAGAGCAATTAAAATATTGAATGGTAA
TTGTTTACCATTGGTTCCAGAGAAAGGAACAGTTGGAGCATCTGGAGATTTAGCACCATT
ATCACATTTAGCATTGGGTATGATGGGTGAGGGTAAGATGTATGATTTTGGCGACAGTGG
AAATACATTCACCAGTAACTTGGATGTCGATGTTTTAGAGTATAGAAACTTTAAATTCTC
ACCAGCCAATGAAATTTTAAAGAGACAAAATTTAACACCAATTGAATTGAACGCAAAGGA
AGGTCTTGCATTGATTAAXXXXXXXXXX

pkpvlipytvyslmlsshlikltcnilt*SGGMITSENKPKPVLMLQVNLIRSHSSGVGT
PLTPERTRMLLALRINVLTKGYSGITLETVKRAIKILNGNCLPLVPEKGTVGASGDLAPL
SHLALGMMGEGKMYDFGDSGNTFTSNLDVDVLEYRNFKFSPANEILKRQNLTPIELNAKE
GLALI---

Frame A:
tetsintihglfsdviippdqinl*hfnlirwddnire*tetsinvts*fn*itfircwy
tintrkn*nvisikn*cinkriqwyyirdskesn*niew*lftigsrernswsiwrfsti
itfsigydg*g*dv*fwrqwkyihq*lgcrcfrv*kl*iltsq*nfketkfntn*ierkg
rscid---


Frame B:
pkpvlipytvyslmlsshlikltcnilt*SGGMITSENKPKPVLMLQVNLIRSHSSGVGT
PLTPERTRMLLALRINVLTKGYSGITLETVKRAIKILNGNCLPLVPEKGTVGASGDLAPL
SHLALGMMGEGKMYDFGDSGNTFTSNLDVDVLEYRNFKFSPANEILKRQNLTPIELNAKE
GLALI---


Frame C:
rnqy*yhtrfil*cyhpt*sn*lvtf*ldqvg**hqrinrnqy*cykli*ldhihqvlvh
h*hqkelecy*h*elmy*qkdtvvlh*rq*reqlky*mvivyhwfqrkeqlehlei*hhy
hi*hwv*wvrvrcmilatveihspvtwmsmf*sietlnshqpmkf*rdki*hqln*tqrk
vlh*l---

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SLE618 (SLE618Q) /CSM/SL/SLE6-A/SLE618Q.Seq.d/                       1106   0.0
SSI722 (SSI722Q) /CSM/SS/SSI7-A/SSI722Q.Seq.d/                        704   0.0
VFB568 (VFB568Q) /CSM/VF/VFB5-C/VFB568Q.Seq.d/                         38   0.14
VHJ154 (VHJ154Q) /CSM/VH/VHJ1-C/VHJ154Q.Seq.d/                         36   0.56
VHG223 (VHG223Q) /CSM/VH/VHG2-A/VHG223Q.Seq.d/                         36   0.56
VHC545 (VHC545Q) /CSM/VH/VHC5-B/VHC545Q.Seq.d/                         36   0.56
VHC519 (VHC519Q) /CSM/VH/VHC5-A/VHC519Q.Seq.d/                         36   0.56
VHB601 (VHB601Q) /CSM/VH/VHB6-A/VHB601Q.Seq.d/                         36   0.56
VFL234 (VFL234Q) /CSM/VF/VFL2-B/VFL234Q.Seq.d/                         36   0.56
VFI119 (VFI119Q) /CSM/VF/VFI1-A/VFI119Q.Seq.d/                         36   0.56

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

(AU061552) Dictyostelium discoideum slug cDNA, clone SLE618.     1106   0.0    1
(DN020968) JGI_CAAR2808.fwd NIH_XGC_tropLiv1 Xenopus (Silura...    54   3e-07  2
(DN032364) JGI_CAAR9306.fwd NIH_XGC_tropLiv1 Xenopus (Silura...    54   3e-07  2
(DN027070) JGI_CAAR6072.fwd NIH_XGC_tropLiv1 Xenopus (Silura...    54   3e-07  2
(DN084122) JGI_CABD14570.fwd NIH_XGC_tropLun1 Xenopus (Silur...    54   3e-07  2
(DR882127) JGI_CABK1048.fwd NIH_XGC_tropSpl1 Xenopus (Silura...    54   3e-07  2
(DR839145) JGI_CABC7804.fwd NIH_XGC_tropFat1 Xenopus (Silura...    54   3e-07  2
(DR841538) JGI_CABC10708.fwd NIH_XGC_tropFat1 Xenopus (Silur...    54   3e-07  2
(CX414672) JGI_XZT5531.fwd NIH_XGC_tropTad5 Xenopus (Siluran...    54   3e-07  2
(DT447544) JGI_CABK7458.fwd NIH_XGC_tropSpl1 Xenopus (Silura...    54   4e-07  2

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB042217_1(AB042217|pid:none) Homo sapiens HAL gene for histidas...   155   5e-37
BC080414_1(BC080414|pid:none) Xenopus laevis hypothetical protei...   155   7e-37
BC077229_1(BC077229|pid:none) Xenopus laevis histidine ammonia-l...   154   2e-36
BC076901_1(BC076901|pid:none) Xenopus tropicalis histidine ammon...   153   3e-36
(P35492) RecName: Full=Histidine ammonia-lyase;          Short=H...   152   5e-36
(A7YWP4) RecName: Full=Histidine ammonia-lyase;          Short=H...   152   5e-36
BC115354_1(BC115354|pid:none) Danio rerio hypothetical protein L...   145   6e-34
(Q20502) RecName: Full=Probable histidine ammonia-lyase;        ...   142   6e-33
(Q2YUR3) RecName: Full=Histidine ammonia-lyase;          Short=H...   115   4e-27
(Q6GD82) RecName: Full=Histidine ammonia-lyase;          Short=H...   114   7e-27

 psg: 0.74  gvh: 0.58  alm: 0.45  top: 0.53  tms: 0.00  mit: 0.23  mip: 0.11
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 36.0 %: cytoplasmic
	 32.0 %: nuclear
	 16.0 %: mitochondrial
	 12.0 %: cytoskeletal
	  4.0 %: Golgi

>> prediction for SLE618 is cyt

>SLE618F.Seq
ACCGAAACCAGTATTAATACCATACACGGTTTATTCTCTGATGTTATCATCCCACCTGAT
CAAATTAACTTGTAACATTTTAACTTGATCAGGTGGGATGATAACATCAGAGAATAAACC
GAAACCAGTATTAATGTTACAAGTTAATTTAATTAGATCACATTCATCAGGTGTTGGTAC
ACCATTAACACCAGAAAGAACTAGAATGTTATTAGCATTAAGAATTAATGTATTAACAAA
AGGATACAGTGGTATTACATTAGAGACAGTAAAGAGAGCAATTAAAATATTGAATGGTAA
TTGTTTACCATTGGTTCCAGAGAAAGGAACAGTTGGAGCATCTGGAGATTTAGCACCATT
ATCACATTTAGCATTGGGTATGATGGGTGAGGGTAAGATGTATGATTTTGGCGACAGTGG
AAATACATTCACCAGTAACTTGGATGTCGATGTTTTAGAGTATAGAAACTTTAAATTCTC
ACCAGCCAATGAAATTTTAAAGAGACAAAATTTAACACCAATTGAATTGAACGCAAAGGA
AGGTCTTGCATTGATTAA----------