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Dicty_cDB
Contig List | Clone List | cDNA Library List
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NBDC - LSDB Archive
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Dicty_cDB
Contig List | Clone List | cDNA Library List
Atlas
Atlas | Atlas Image List
SLE391
Library SL
(Link to library)
Clone ID SLE391
Atlas ID -
NBRP ID -
dictyBase ID -
Link to Contig Contig-U16460-1
Original site URL
Representative seq. ID SLE391P
(Link to Original site)
Representative DNA sequence 
>SLE391 (SLE391Q) /CSM/SL/SLE3-D/SLE391Q.Seq.d/
GCCAAATCATATAAAATTATATTTTTTAATTTTATTTGTAAATAATTAATTTGTATTTTT
AAAAAAAAAAAAGATGTCAGAAGCAACTATTGTTGAATTATTAAAAAGATTAGATCAAGC
AACTACTCGTTTAGAAGCAGTTGAAAAATCAATTGNNTCAGGTGTTGCATCATCATCATC
ATCATCATCACCATCAAGTGGTGCAGCTGGTCCATCATCAGCATCAGTTAAGGAATTCCA
AAATTTAGTTGATCAACATATTACACCATTTGTTGCTCTTTCAAAGAAATTAGCACCAGA
AGTTGGTAATCAAGTTGAACAATTAGTTAAAGCCATCGATGCTGAAAAGGCCTTAATCAA
CACTGCATCACAAAGTAAAAAACCATCTCAAGAAACTTTATTAGAATTAATTAAACCATT
AAATAACTTTGCCGCTGAAGTTGGTAAAATTAGAGATAGCAACCGTTCCTCAAAATTCTT
TAACAATCTCTCTGCTATCAGTGAATCAATTGGTTTCCTTAGTTGGGTTGTAGTTGAACC
AACTCCAGGTCCACATGTTGCAGAAATGAGAGGTTCAGCTGAATTCTACACTAATCGTAT
CTTAXXXXXXXXXXAAGGTCCAGGTTTAGGTGCAGTTTTCGGTGAACTTAGCAAAGGTGA
TGGTGTTACCAGTGGTTTAAAAAAAGTTACCAACGATATGAAATCCAAAAATTTCACCGA
CAAATCATCAGTTGTTAAAGCTGCTGATACTAAAGTCGCCAAAGTTGATGCTCCATCTAG
ACCAGCCGTTTTTGCTCTCCAAGGTAACAAATGGTCCATTGAATATCAAGTTAACAACAA
AGAAATTGTCATTGCCGAGCCAGATAGTCGTCAAACTGTTTACATTTTCCAATGTGTAAA
CTCTTTAGTTCAAATCAAAGGTAAAGTTAATGCAATTACTCTTGATGGTTGTAAAAAGAC
TTCAATCGTTTTCGAAAATGCCATTTCCTCTTGTGAAGTTGTCAATTGTAATGGTGTTGA
AATCCAAGTCACTGGTCGTGTACCATCAATTGCTATCGATAAGACAAGTGGTTGTCAAAT
TTATCTCTCTAAAGATTCTTTAGAAACTGAAATCGTCTCTTCAAAATCATCTGAAATGAA
TGTTTTAATTCCAGGTGCAACTGAAAATGATGATTTAGTTGAATTAGCTATTCCAGAACA
ATATAAAACTTCTGTTAAAGGTAATAAATTACATACTGAATCAACTTCACATATTTAAAA
AAAAAATTTTTTAAATTTATAAATAAAAAAAAATAAAATAAAAA
sequence update 1999. 1.19
Translated Amino Acid sequence 
pnhiklyflilfvnn*FVFLKKKKMSEATIVELLKRLDQATTRLEAVEKSIXSGVASSSS
SSSPSSGAAGPSSASVKEFQNLVDQHITPFVALSKKLAPEVGNQVEQLVKAIDAEKALIN
TASQSKKPSQETLLELIKPLNNFAAEVGKIRDSNRSSKFFNNLSAISESIGFLSWVVVEP
TPGPHVAEMRGSAEFYTNRIL---

---GPGLGAVFGELSKGDGVTSGLKKVTNDMKSKNFTDKSSVVKAADTKVAKVDAPSRPA
VFALQGNKWSIEYQVNNKEIVIAEPDSRQTVYIFQCVNSLVQIKGKVNAITLDGCKKTSI
VFENAISSCEVVNCNGVEIQVTGRVPSIAIDKTSGCQIYLSKDSLETEIVSSKSSEMNVL
IPGATENDDLVELAIPEQYKTSVKGNKLHTESTSHI*kknflnl*ikknkik
Translated Amino Acid sequence (All Frames) 
Frame A:
aksykiiffnfick*licifkkkkdvrsnyc*iikkirssnysfrss*kinxxrcciiii
iiitikwcswsiisis*gipkfs*styyticcsfkeistrsw*ss*tis*shrc*kglnq
hcitk*ktisrnfirin*tik*lcr*sw*n*r*qpflkil*qslcyq*inwfp*lgcs*t
nsrstccrnerfs*ilh*syl---

---kvqv*vqfsvnlakvmvlpvv*kklpti*npkisptnhqllkllilkspklmlhldq
pfllskvtngplniklttkklslpsqivvklftfsnv*tl*fkskvklmqlllmvvkrlq
sfskmpfplvklsivmvlkskslvvyhqllsirqvvvkfislkil*klksslqnhlk*mf
*fqvqlkmmi*ln*lfqnniklllkvinyilnqlhifkkkif*iyk*kkik*k

Frame B:
pnhiklyflilfvnn*FVFLKKKKMSEATIVELLKRLDQATTRLEAVEKSIXSGVASSSS
SSSPSSGAAGPSSASVKEFQNLVDQHITPFVALSKKLAPEVGNQVEQLVKAIDAEKALIN
TASQSKKPSQETLLELIKPLNNFAAEVGKIRDSNRSSKFFNNLSAISESIGFLSWVVVEP
TPGPHVAEMRGSAEFYTNRIL---

---rsrfrcsfr*t*qr*wcyqwfkksyqryeiqkfhrqiisc*sc*y*srqs*csi*ts
rfcspr*qmvh*iss*qqrnchcrar*ssnclhfpmcklfssnqr*s*cnys*wl*kdfn
rfrkchfll*scql*wc*npshwsctincyr*dkwlsnlsl*rffrn*nrlfkii*necf
nsrcn*k**fs*isysrti*nfc*r**ity*inftylkkkffkfinkkk*nk

Frame C:
qii*nyif*fyl*iinlyf*kkkrcqkqlllny*kd*ikqllv*kqlknqlxqvlhhhhh
hhhhqvvqlvhhqhqlrnski*linilhhlllfqrn*hqklviklnn*lkpsmlkrp*st
lhhkvknhlkkly*n*lnh*itlplklvkleiatvpqnsltisllsvnqlvslvgl*lnq
lqvhmlqk*evqlnstlivs---

---GPGLGAVFGELSKGDGVTSGLKKVTNDMKSKNFTDKSSVVKAADTKVAKVDAPSRPA
VFALQGNKWSIEYQVNNKEIVIAEPDSRQTVYIFQCVNSLVQIKGKVNAITLDGCKKTSI
VFENAISSCEVVNCNGVEIQVTGRVPSIAIDKTSGCQIYLSKDSLETEIVSSKSSEMNVL
IPGATENDDLVELAIPEQYKTSVKGNKLHTESTSHI*kknflnl*ikknkik
Homology vs CSM-cDNA 

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SLE391 (SLE391Q) /CSM/SL/SLE3-D/SLE391Q.Seq.d/                       2000   0.0
VFL760 (VFL760Q) /CSM/VF/VFL7-C/VFL760Q.Seq.d/                       1231   0.0
AFH502 (AFH502Q) /CSM/AF/AFH5-A/AFH502Q.Seq.d/                       1227   0.0
SFE296 (SFE296Q) /CSM/SF/SFE2-D/SFE296Q.Seq.d/                       1225   0.0
CFF143 (CFF143Q) /CSM/CF/CFF1-B/CFF143Q.Seq.d/                       1225   0.0
AFK741 (AFK741Q) /CSM/AF/AFK7-B/AFK741Q.Seq.d/                       1225   0.0
AFE320 (AFE320Q) /CSM/AF/AFE3-A/AFE320Q.Seq.d/                       1225   0.0
AFE312 (AFE312Q) /CSM/AF/AFE3-A/AFE312Q.Seq.d/                       1225   0.0
AFM838 (AFM838Q) /CSM/AF/AFM8-B/AFM838Q.Seq.d/                       1223   0.0
VFB801 (VFB801Q) /CSM/VF/VFB8-A/VFB801Q.Seq.d/                       1217   0.0
own update 2009. 4. 4
Homology vs DNA 

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

(U43027) Dictyostelium discoideum cyclase associated protein...  1132   0.0    2
(AU075945) Dictyostelium discoideum slug cDNA, clone SSA180.     1132   0.0    2
(AU034951) Dictyostelium discoideum slug cDNA, clone SLE391.     1132   0.0    2
(AU034738) Dictyostelium discoideum slug cDNA, clone SLE258.     1132   0.0    1
(BJ434661) Dictyostelium discoideum cDNA clone:ddv24h15, 3' ...  1132   0.0    2
(BJ343411) Dictyostelium discoideum cDNA clone:dda16c01, 3' ...  1132   0.0    2
(BJ341148) Dictyostelium discoideum cDNA clone:dda5n09, 3' e...  1132   0.0    2
(BJ403054) Dictyostelium discoideum cDNA clone:dds18l05, 3' ...  1126   0.0    2
(BJ400374) Dictyostelium discoideum cDNA clone:dds9o24, 3' e...  1126   0.0    2
(BJ398493) Dictyostelium discoideum cDNA clone:dds12l15, 3' ...  1126   0.0    2
dna update 2009. 4. 2
Homology vs Protein 

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

(P54654) RecName: Full=Adenylyl cyclase-associated protein;     ...   380   e-104
AK293134_1(AK293134|pid:none) Homo sapiens cDNA FLJ50434 complet...   244   4e-63
CP001332_154(CP001332|pid:none) Micromonas sp. RCC299 chromosome...   219   2e-55
AK295600_1(AK295600|pid:none) Homo sapiens cDNA FLJ50529 complet...   198   3e-49
AB014759_1(AB014759|pid:none) Arabidopsis thaliana mRNA for Atca...   194   8e-48
AK071446_1(AK071446|pid:none) Oryza sativa Japonica Group cDNA c...   192   2e-47
AL034372_2(AL034372|pid:none) Human DNA sequence from clone RP1-...   188   4e-46
DQ890588_1(DQ890588|pid:none) Synthetic construct clone IMAGE:10...   188   4e-46
AK297538_1(AK297538|pid:none) Homo sapiens cDNA FLJ59629 complet...   187   7e-46
CR859382_1(CR859382|pid:none) Pongo abelii mRNA; cDNA DKFZp459P1...   187   7e-46
protein update 2009. 6. 3
PSORT 

 psg: 0.72  gvh: 0.56  alm: 0.40  top: 0.53  tms: 0.00  mit: 0.17  mip: 0.00
 nuc: 0.04  erl: 0.00  erm: 0.00  pox: 0.30  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 40.0 %: cytoplasmic
	 36.0 %: nuclear
	 12.0 %: mitochondrial
	  8.0 %: cytoskeletal
	  4.0 %: Golgi

>> prediction for SLE391 is cyt
5' end seq. ID SLE391F
5' end seq. 
>SLE391F.Seq
GCCAAATCATATAAAATTATATTTTTTAATTTTATTTGTAAATAATTAATTTGTATTTTT
AAAAAAAAAAAAGATGTCAGAAGCAACTATTGTTGAATTATTAAAAAGATTAGATCAAGC
AACTACTCGTTTAGAAGCAGTTGAAAAATCAATTGNNTCAGGTGTTGCATCATCATCATC
ATCATCATCACCATCAAGTGGTGCAGCTGGTCCATCATCAGCATCAGTTAAGGAATTCCA
AAATTTAGTTGATCAACATATTACACCATTTGTTGCTCTTTCAAAGAAATTAGCACCAGA
AGTTGGTAATCAAGTTGAACAATTAGTTAAAGCCATCGATGCTGAAAAGGCCTTAATCAA
CACTGCATCACAAAGTAAAAAACCATCTCAAGAAACTTTATTAGAATTAATTAAACCATT
AAATAACTTTGCCGCTGAAGTTGGTAAAATTAGAGATAGCAACCGTTCCTCAAAATTCTT
TAACAATCTCTCTGCTATCAGTGAATCAATTGGTTTCCTTAGTTGGGTTGTAGTTGAACC
AACTCCAGGTCCACATGTTGCAGAAATGAGAGGTTCAGCTGAATTCTACACTAATCGTAT
CTTA----------
Length of 5' end seq. 604
3' end seq. ID SLE391Z
3' end seq. 
>SLE391Z.Seq
----------AAGGTCCAGGTTTAGGTGCAGTTTTCGGTGAACTTAGCAAAGGTGATGGT
GTTACCAGTGGTTTAAAAAAAGTTACCAACGATATGAAATCCAAAAATTTCACCGACAAA
TCATCAGTTGTTAAAGCTGCTGATACTAAAGTCGCCAAAGTTGATGCTCCATCTAGACCA
GCCGTTTTTGCTCTCCAAGGTAACAAATGGTCCATTGAATATCAAGTTAACAACAAAGAA
ATTGTCATTGCCGAGCCAGATAGTCGTCAAACTGTTTACATTTTCCAATGTGTAAACTCT
TTAGTTCAAATCAAAGGTAAAGTTAATGCAATTACTCTTGATGGTTGTAAAAAGACTTCA
ATCGTTTTCGAAAATGCCATTTCCTCTTGTGAAGTTGTCAATTGTAATGGTGTTGAAATC
CAAGTCACTGGTCGTGTACCATCAATTGCTATCGATAAGACAAGTGGTTGTCAAATTTAT
CTCTCTAAAGATTCTTTAGAAACTGAAATCGTCTCTTCAAAATCATCTGAAATGAATGTT
TTAATTCCAGGTGCAACTGAAAATGATGATTTAGTTGAATTAGCTATTCCAGAACAATAT
AAAACTTCTGTTAAAGGTAATAAATTACATACTGAATCAACTTCACATATTTAAAAAAAA
AATTTTTTAAATTTATAAATAAAAAAAAATAAAATAAAAA
Length of 3' end seq. 690
Connected seq. ID SLE391P
Connected seq. 
>SLE391P.Seq
GCCAAATCATATAAAATTATATTTTTTAATTTTATTTGTAAATAATTAATTTGTATTTTT
AAAAAAAAAAAAGATGTCAGAAGCAACTATTGTTGAATTATTAAAAAGATTAGATCAAGC
AACTACTCGTTTAGAAGCAGTTGAAAAATCAATTGNNTCAGGTGTTGCATCATCATCATC
ATCATCATCACCATCAAGTGGTGCAGCTGGTCCATCATCAGCATCAGTTAAGGAATTCCA
AAATTTAGTTGATCAACATATTACACCATTTGTTGCTCTTTCAAAGAAATTAGCACCAGA
AGTTGGTAATCAAGTTGAACAATTAGTTAAAGCCATCGATGCTGAAAAGGCCTTAATCAA
CACTGCATCACAAAGTAAAAAACCATCTCAAGAAACTTTATTAGAATTAATTAAACCATT
AAATAACTTTGCCGCTGAAGTTGGTAAAATTAGAGATAGCAACCGTTCCTCAAAATTCTT
TAACAATCTCTCTGCTATCAGTGAATCAATTGGTTTCCTTAGTTGGGTTGTAGTTGAACC
AACTCCAGGTCCACATGTTGCAGAAATGAGAGGTTCAGCTGAATTCTACACTAATCGTAT
CTTA----------AAGGTCCAGGTTTAGGTGCAGTTTTCGGTGAACTTAGCAAAGGTGA
TGGTGTTACCAGTGGTTTAAAAAAAGTTACCAACGATATGAAATCCAAAAATTTCACCGA
CAAATCATCAGTTGTTAAAGCTGCTGATACTAAAGTCGCCAAAGTTGATGCTCCATCTAG
ACCAGCCGTTTTTGCTCTCCAAGGTAACAAATGGTCCATTGAATATCAAGTTAACAACAA
AGAAATTGTCATTGCCGAGCCAGATAGTCGTCAAACTGTTTACATTTTCCAATGTGTAAA
CTCTTTAGTTCAAATCAAAGGTAAAGTTAATGCAATTACTCTTGATGGTTGTAAAAAGAC
TTCAATCGTTTTCGAAAATGCCATTTCCTCTTGTGAAGTTGTCAATTGTAATGGTGTTGA
AATCCAAGTCACTGGTCGTGTACCATCAATTGCTATCGATAAGACAAGTGGTTGTCAAAT
TTATCTCTCTAAAGATTCTTTAGAAACTGAAATCGTCTCTTCAAAATCATCTGAAATGAA
TGTTTTAATTCCAGGTGCAACTGAAAATGATGATTTAGTTGAATTAGCTATTCCAGAACA
ATATAAAACTTCTGTTAAAGGTAATAAATTACATACTGAATCAACTTCACATATTTAAAA
AAAAAATTTTTTAAATTTATAAATAAAAAAAAATAAAATAAAAA
Length of connected seq. 1294
Full length Seq ID -
Full length Seq. -
Length of full length seq. -