>SLE210 (SLE210Q) /CSM/SL/SLE2-A/SLE210Q.Seq.d/
ACAAAAGTTTCAAGATAGAGGTGAAGTTCAAATGGATGAAGAAGGTCAACCAATTGAAAA
TATTTCAGCAGAAATTTCCTCTGTTCCAATTTTACCACGTCTTCAAACAAAATCAACTCA
TTTTGCAAAAGGTGATACTGTAAAAGTTATTCAAGGTGATCTTAAAAATTTAATGGCAAT
TGTAGAGTCTGTTGAAGAAGATAGAGTTTTAATTTTACCAATTGATGAACAAATTAAGGA
TTTATTTGCATTCAAACCATATGAACTACAAAAATATTTTAAAGTTGGTGATCATGTTAA
AGCAATTGGAGGTAGATATGAAGGTGAAACAGGTATGGTGTTAAGAGTAGATGATTTACA
GGTCGTTTTATTATCAGATTTGACAATGTCAGAGATTAAAGTTAAACCTCAAGATTTACA
AGAGTGTACAGAAGTAGCAACTGGTCGTTTAGAGTTGGGTAATTATGAATTACATGATTT
AGTTCAAATTGGACCACATAAAGTGGGTGTTATTATAAAAGTGGAAAGAGATTCATTCAA
GGTTTTGGATGAGAGTTCAAATGTTAGCACAGTTAAATTACAAGAGGTTGGAAATAAGAG
AAGAAATAAATCATTCACAACATTGGATGCACATCATAACACAATCACCTCTGGTGATTT
ATTGAXXXXXXXXXXATGGAACGATTATAGCAGTGGTACTACACCAGGTACAATTATAGT
TTGTACTCACCTTACACACCAAATACCCCATTGGATGGTTCCAATAGAAGTGATCCAAAC
TATACACCATATGATCGTTCCACTCCTTCAATGGGTTATGGTAATGATCCAAATCCAACA
CCATCCTATATGTCAAATTATACACCACATGAAATTCCTTCATCACCATACACACCACAT
AATCCACAAACACCCGCAACTCCAAACTCAAGTGAAGATCATGACGAAGAAGTTGAACCA
CAATATTGGTCTGGTACAAAGATTGAAGTAGTCTTTAAGGATTCTGGTAAACATGCCGTA
GTTTTAGATAATCTCTCTGATTCAACCGTTAGAGTTGAAATGTTAGACACCAAAGAAGTA
ATTGATAATGTTTCACAATCTCAACTCAATTTGGTTCCACCAGCTAAAAAAGATCGTGTC
GTCATTGTTAAAGGTAAATTATGTGGTCAAAGTGGTAATCTTTTCATTCTTACTGATGAA
AATACTGGTATCGTTAAAATGAATTCAAACTTTGATTTTAAAGTTTTCAAAATGTCTTAT
ATTGGTAAACTAATAAGATAAATTAATAATTATAAAAAACAAATAAATAAAAAAAAAAAA
TAAAT

QKFQDRGEVQMDEEGQPIENISAEISSVPILPRLQTKSTHFAKGDTVKVIQGDLKNLMAI
VESVEEDRVLILPIDEQIKDLFAFKPYELQKYFKVGDHVKAIGGRYEGETGMVLRVDDLQ
VVLLSDLTMSEIKVKPQDLQECTEVATGRLELGNYELHDLVQIGPHKVGVIIKVERDSFK
VLDESSNVSTVKLQEVGNKRRNKSFTTLDAHHNTITSGDLL---

---WNDYSSGTTPGTIIVCTHLTHQIPHWMVPIEVIQTIHHMIVPLLQWVMVMIQIQHHP
ICQIIHHMKFLHHHTHHIIHKHPQLQTQVKIMTKKLNHNIGLVQRLK*slrilvnmp*f*
iisliqplelkc*tpkk*limfhnlnsiwfhqlkkivssllkvnyvvkvvifsfllmkil
vslk*iqtlilkfskclilvn**dkliiiknk*ikkknk

Frame A:
tkvsr*r*ssng*rrstn*kyfsrnflcsnfttssnkinsfckr*ycksysr*s*kfngn
crvc*rr*sfnftn**tn*gficiqti*ttkif*sw*sc*snwr*i*r*nrygvksr*ft
grfiirfdnvrd*s*tsrftrvyrssnwsfrvg*l*it*fssnwtt*sgcyyksgkrfiq
gfg*efkc*hs*itrgwk*ekk*iihnigcts*hnhlw*fi---

---merl*qwyytrynyslyspytpntpldgsnrsdpnytpydrstpsmgygndpnptps
ymsnytpheipsspytphnpqtpatpnssedhdeevepqywsgtkievvfkdsgkhavvl
dnlsdstvrvemldtkevidnvsqsqlnlvppakkdrvvivkgklcgqsgnlfiltdent
givkmnsnfdfkvfkmsyigklir*innykkqinkkkk*

Frame B:
QKFQDRGEVQMDEEGQPIENISAEISSVPILPRLQTKSTHFAKGDTVKVIQGDLKNLMAI
VESVEEDRVLILPIDEQIKDLFAFKPYELQKYFKVGDHVKAIGGRYEGETGMVLRVDDLQ
VVLLSDLTMSEIKVKPQDLQECTEVATGRLELGNYELHDLVQIGPHKVGVIIKVERDSFK
VLDESSNVSTVKLQEVGNKRRNKSFTTLDAHHNTITSGDLL---

---WNDYSSGTTPGTIIVCTHLTHQIPHWMVPIEVIQTIHHMIVPLLQWVMVMIQIQHHP
ICQIIHHMKFLHHHTHHIIHKHPQLQTQVKIMTKKLNHNIGLVQRLK*slrilvnmp*f*
iisliqplelkc*tpkk*limfhnlnsiwfhqlkkivssllkvnyvvkvvifsfllmkil
vslk*iqtlilkfskclilvn**dkliiiknk*ikkknk

Frame C:
ksfkievkfkwmkkvnqlkifqqkfplfqfyhvfkqnqlilqkvil*klfkvilki*wql
*sllkkief*fyqlmnklriylhsnhmnyknilklvimlkqlevdmkvkqvwc*e*miyr
sfyyqi*qcqrlklnlkiyksvqk*qlvv*swvimnymi*fkldhikwvll*kwkeihsr
fwmrvqmlaqlnykrleireeinhsqhwmhiitqsplviy*---

---gtiiavvlhqvql*fvltlhtkypigwfq*k*sklyti*sfhsfnglw**sksntil
yvklytt*nsfitihtt*stntrnsklk*rs*rrs*ttilvwykd*ssl*gfw*tcrsfr
*sl*fnr*s*nvrhqrsn**cftistqfgsts*krscrhc*r*imwskw*sfhsy**kyw
yr*nefkl*f*sfqnvlyw*tnkin**l*ktnk*kkkin

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SLE210 (SLE210Q) /CSM/SL/SLE2-A/SLE210Q.Seq.d/                       2415   0.0
CHB876 (CHB876Q) /CSM/CH/CHB8-D/CHB876Q.Seq.d/                       1106   0.0
SLE719 (SLE719Q) /CSM/SL/SLE7-A/SLE719Q.Seq.d/                        932   0.0
AFC757 (AFC757Q) /CSM/AF/AFC7-C/AFC757Q.Seq.d/                        890   0.0
SLE561 (SLE561Q) /CSM/SL/SLE5-C/SLE561Q.Seq.d/                        783   0.0
VFJ619 (VFJ619Q) /CSM/VF/VFJ6-A/VFJ619Q.Seq.d/                        595   e-169
AFJ755 (AFJ755Q) /CSM/AF/AFJ7-C/AFJ755Q.Seq.d/                        527   e-148
SLD872 (SLD872Q) /CSM/SL/SLD8-C/SLD872Q.Seq.d/                        472   e-132
AFJ355 (AFJ355Q) /CSM/AF/AFJ3-C/AFJ355Q.Seq.d/                        204   3e-51
CHD652 (CHD652Q) /CSM/CH/CHD6-C/CHD652Q.Seq.d/                         72   2e-11

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

AE017263|AE017263.1 Mesoplasma florum L1 complete genome.          36   0.015  24
AC116986|AC116986.2 Dictyostelium discoideum chromosome 2 map 2234041-2567370 strain AX4, complete sequence.    34   0.079  15
AP001779|AP001779.3 Homo sapiens genomic DNA, chromosome 18q12 clone:RP11-810C2, WORKING DRAFT SEQUENCE, 13 unordered pieces.    34   0.18   11
AC026941|AC026941.2 Homo sapiens chromosome 1 clone RP11-212B4 map 1, WORKING DRAFT SEQUENCE, 8 unordered pieces.    42   0.21   5
AC107538|AC107538.5 Rattus norvegicus clone CH230-213H15, *** SEQUENCING IN PROGRESS ***, 2 unordered pieces.    40   0.36   5
CN007477|CN007477.1 CSECS150A09_NECu0025 CabSau Flower Nectary Stage 25 (NECu0025) Vitis vinifera cDNA clone CSECS150A09 3', mRNA sequence.    48   0.37   1
CF440575|CF440575.1 EST676920 normalized cDNA library of onion Allium cepa cDNA clone ACAFJ74, mRNA sequence.    48   0.37   1
CF214989|CF214989.1 CAST0001_IIIF_C04 Vitis vinifera cv. cabernet sauvignon Stem - CAST Vitis vinifera cDNA clone CAST0001_IIIF_C04 5', mRNA sequence.    48   0.37   1
CN006241|CN006241.1 CSECS130G06_CELu0001 CabSau Cell Culture (CELu0001) Vitis vinifera cDNA clone CSECS130G06 3', mRNA sequence.    48   0.37   1
CF215069|CF215069.1 CAST0001_IIIR_C04 Vitis vinifera cv. cabernet sauvignon Stem - CAST Vitis vinifera cDNA clone CAST0001_IIIR_C04 3', mRNA sequence.    48   0.37   1

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC058598_1(BC058598|pid:none) Mus musculus suppressor of Ty 5 ho...   145   2e-33
(O55201) RecName: Full=Transcription elongation factor SPT5; Alt...   145   4e-33
AK145117_1(AK145117|pid:none) Mus musculus mammary gland RCB-052...   145   4e-33
BC057449_1(BC057449|pid:none) Mus musculus suppressor of Ty 5 ho...   145   4e-33
AK146453_1(AK146453|pid:none) Mus musculus 16 days embryo heart ...   145   4e-33
AK146055_1(AK146055|pid:none) Mus musculus 13 days pregnant adul...   145   4e-33
AK146583_1(AK146583|pid:none) Mus musculus 17 days embryo heart ...   145   4e-33
BC134446_1(BC134446|pid:none) Bos taurus suppressor of Ty 5 homo...   144   5e-33
AB463294_1(AB463294|pid:none) Synthetic construct DNA, clone: pF...   144   5e-33
AK302954_1(AK302954|pid:none) Homo sapiens cDNA FLJ55629 complet...   144   5e-33

 psg: 0.48  gvh: 0.38  alm: 0.36  top: 0.53  tms: 0.00  mit: 0.25  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.33  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 48.0 %: nuclear
	 20.0 %: mitochondrial
	 20.0 %: cytoplasmic
	  4.0 %: cytoskeletal
	  4.0 %: vacuolar
	  4.0 %: vesicles of secretory system

>> prediction for SLE210 is nuc

>SLE210F.Seq
ACAAAAGTTTCAAGATAGAGGTGAAGTTCAAATGGATGAAGAAGGTCAACCAATTGAAAA
TATTTCAGCAGAAATTTCCTCTGTTCCAATTTTACCACGTCTTCAAACAAAATCAACTCA
TTTTGCAAAAGGTGATACTGTAAAAGTTATTCAAGGTGATCTTAAAAATTTAATGGCAAT
TGTAGAGTCTGTTGAAGAAGATAGAGTTTTAATTTTACCAATTGATGAACAAATTAAGGA
TTTATTTGCATTCAAACCATATGAACTACAAAAATATTTTAAAGTTGGTGATCATGTTAA
AGCAATTGGAGGTAGATATGAAGGTGAAACAGGTATGGTGTTAAGAGTAGATGATTTACA
GGTCGTTTTATTATCAGATTTGACAATGTCAGAGATTAAAGTTAAACCTCAAGATTTACA
AGAGTGTACAGAAGTAGCAACTGGTCGTTTAGAGTTGGGTAATTATGAATTACATGATTT
AGTTCAAATTGGACCACATAAAGTGGGTGTTATTATAAAAGTGGAAAGAGATTCATTCAA
GGTTTTGGATGAGAGTTCAAATGTTAGCACAGTTAAATTACAAGAGGTTGGAAATAAGAG
AAGAAATAAATCATTCACAACATTGGATGCACATCATAACACAATCACCTCTGGTGATTT
ATTGAXXXXXXXXXX

>SLE210Z.Seq
XXXXXXXXXXATGGAACGATTATAGCAGTGGTACTACACCAGGTACAATTATAGTTTGTA
CTCACCTTACACACCAAATACCCCATTGGATGGTTCCAATAGAAGTGATCCAAACTATAC
ACCATATGATCGTTCCACTCCTTCAATGGGTTATGGTAATGATCCAAATCCAACACCATC
CTATATGTCAAATTATACACCACATGAAATTCCTTCATCACCATACACACCACATAATCC
ACAAACACCCGCAACTCCAAACTCAAGTGAAGATCATGACGAAGAAGTTGAACCACAATA
TTGGTCTGGTACAAAGATTGAAGTAGTCTTTAAGGATTCTGGTAAACATGCCGTAGTTTT
AGATAATCTCTCTGATTCAACCGTTAGAGTTGAAATGTTAGACACCAAAGAAGTAATTGA
TAATGTTTCACAATCTCAACTCAATTTGGTTCCACCAGCTAAAAAAGATCGTGTCGTCAT
TGTTAAAGGTAAATTATGTGGTCAAAGTGGTAATCTTTTCATTCTTACTGATGAAAATAC
TGGTATCGTTAAAATGAATTCAAACTTTGATTTTAAAGTTTTCAAAATGTCTTATATTGG
TAAACTAATAAGATAAATTAATAATTATAAAAAACAAATAAATAAAAAAAAAAAATAAAT

>SLE210P.Seq
ACAAAAGTTTCAAGATAGAGGTGAAGTTCAAATGGATGAAGAAGGTCAACCAATTGAAAA
TATTTCAGCAGAAATTTCCTCTGTTCCAATTTTACCACGTCTTCAAACAAAATCAACTCA
TTTTGCAAAAGGTGATACTGTAAAAGTTATTCAAGGTGATCTTAAAAATTTAATGGCAAT
TGTAGAGTCTGTTGAAGAAGATAGAGTTTTAATTTTACCAATTGATGAACAAATTAAGGA
TTTATTTGCATTCAAACCATATGAACTACAAAAATATTTTAAAGTTGGTGATCATGTTAA
AGCAATTGGAGGTAGATATGAAGGTGAAACAGGTATGGTGTTAAGAGTAGATGATTTACA
GGTCGTTTTATTATCAGATTTGACAATGTCAGAGATTAAAGTTAAACCTCAAGATTTACA
AGAGTGTACAGAAGTAGCAACTGGTCGTTTAGAGTTGGGTAATTATGAATTACATGATTT
AGTTCAAATTGGACCACATAAAGTGGGTGTTATTATAAAAGTGGAAAGAGATTCATTCAA
GGTTTTGGATGAGAGTTCAAATGTTAGCACAGTTAAATTACAAGAGGTTGGAAATAAGAG
AAGAAATAAATCATTCACAACATTGGATGCACATCATAACACAATCACCTCTGGTGATTT
ATTGA----------ATGGAACGATTATAGCAGTGGTACTACACCAGGTACAATTATAGT
TTGTACTCACCTTACACACCAAATACCCCATTGGATGGTTCCAATAGAAGTGATCCAAAC
TATACACCATATGATCGTTCCACTCCTTCAATGGGTTATGGTAATGATCCAAATCCAACA
CCATCCTATATGTCAAATTATACACCACATGAAATTCCTTCATCACCATACACACCACAT
AATCCACAAACACCCGCAACTCCAAACTCAAGTGAAGATCATGACGAAGAAGTTGAACCA
CAATATTGGTCTGGTACAAAGATTGAAGTAGTCTTTAAGGATTCTGGTAAACATGCCGTA
GTTTTAGATAATCTCTCTGATTCAACCGTTAGAGTTGAAATGTTAGACACCAAAGAAGTA
ATTGATAATGTTTCACAATCTCAACTCAATTTGGTTCCACCAGCTAAAAAAGATCGTGTC
GTCATTGTTAAAGGTAAATTATGTGGTCAAAGTGGTAATCTTTTCATTCTTACTGATGAA
AATACTGGTATCGTTAAAATGAATTCAAACTTTGATTTTAAAGTTTTCAAAATGTCTTAT
ATTGGTAAACTAATAAGATAAATTAATAATTATAAAAAACAAATAAATAAAAAAAAAAAA
TAAAT