>SLD388 (SLD388Q) /CSM/SL/SLD3-D/SLD388Q.Seq.d/
AACAACAACAACAACAACAACAACAACAACAACAACAACAAATTCTTACTCCTAAAAAGA
AAATGATTTCCACTTCAAACGGTGGTACATTTATAAAGAAAGAAGATACTTCGCCAXXXX
XXXXXX

QQQQQQQQQQQQQILTPKKKMISTSNGGTFIKKEDTS---

Frame A:
nnnnnnnnnnnnnkflllkrk*fplqtvvhl*rkkilr---


Frame B:
tttttttttttttnsys*kendfhfkrwyiykerryfa---


Frame C:
QQQQQQQQQQQQQILTPKKKMISTSNGGTFIKKEDTS---

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SSF435 (SSF435Q) /CSM/SS/SSF4-B/SSF435Q.Seq.d/                        149   1e-35
SSE828 (SSE828Q) /CSM/SS/SSE8-B/SSE828Q.Seq.d/                        149   1e-35
SLD388 (SLD388Q) /CSM/SL/SLD3-D/SLD388Q.Seq.d/                        149   1e-35
AFM461 (AFM461Q) /CSM/AF/AFM4-C/AFM461Q.Seq.d/                        149   1e-35
VHO423 (VHO423Q) /CSM/VH/VHO4-A/VHO423Q.Seq.d/                         32   1.7
VHF570 (VHF570Q) /CSM/VH/VHF5-C/VHF570Q.Seq.d/                         32   1.7
VHF361 (VHF361Q) /CSM/VH/VHF3-C/VHF361Q.Seq.d/                         32   1.7
VHE560 (VHE560Q) /CSM/VH/VHE5-C/VHE560Q.Seq.d/                         32   1.7
VHD371 (VHD371Q) /CSM/VH/VHD3-C/VHD371Q.Seq.d/                         32   1.7
VFO571 (VFO571Q) /CSM/VF/VFO5-C/VFO571Q.Seq.d/                         32   1.7

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

(AU072543) Dictyostelium discoideum slug cDNA, clone SSE828.      149   3e-32  1
(AU061149) Dictyostelium discoideum slug cDNA, clone SLD388.      149   3e-32  1
(BJ329602) Dictyostelium discoideum cDNA clone:dda25j16, 5' ...   149   3e-32  1
(AC198030) Zea mays chromosome unknown clone CH201-30G13; ZM...    46   0.27   1
(EJ706432) 1092956055249 Global-Ocean-Sampling_GS-30-02-01-1...    40   0.50   2
(AC232784) Lama pacos clone CH246-216B4, WORKING DRAFT SEQUE...    44   1.1    1
(AC232186) Lama pacos clone CH246-66H15, WORKING DRAFT SEQUE...    44   1.1    1
(AC192517) Chlorocebus aethiops clone CH252-236K8, WORKING D...    44   1.1    1
(AP009704) Lotus japonicus genomic DNA, chromosome 2, clone:...    42   4.2    1
(AC135149) Rattus norvegicus clone CH230-112D19, WORKING DRA...    42   4.2    1

 ***** No hits found ******

Lambda     K      H
   0.318    0.134    0.401

Gapped
Lambda     K      H
   0.267   0.0410    0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3159261
Number of Hits to DB: 138,473,198

 psg: 0.66  gvh: 0.28  alm: 0.64  top: 0.53  tms: 0.00  mit: 0.26  mip: 0.00
 nuc: 0.09  erl: 0.00  erm: 0.20  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 48.0 %: nuclear
	 28.0 %: cytoplasmic
	 12.0 %: cytoskeletal
	 12.0 %: mitochondrial

>> prediction for SLD388 is nuc

>SLD388F.Seq
AACAACAACAACAACAACAACAACAACAACAACAACAACAAATTCTTACTCCTAAAAAGA
AAATGATTTCCACTTCAAACGGTGGTACATTTATAAAGAAAGAAGATACTTCGCCA----
------